mRNA_F-serratus_M_contig1291.2151.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: D7FX73_ECTSI (DRY_EERY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX73_ECTSI) HSP 1 Score: 479 bits (1232), Expect = 1.200e-153 Identity = 320/520 (61.54%), Postives = 362/520 (69.62%), Query Frame = 3
Query: 93 MADYYYEARKHDKWLRRHAKENKARKERMKEFQRAHSRDHQQSLIIEGKPCKLYRDAAASSV-EATLMPWNGRHDVLIDRFDARAVLDMVPLSPKDTGDHREKKGLETFLSFERYRGILDAQRARLGEREHTAAVSEQVREKLAEIARVQQGEPDEAEMLAAREAQNERYKKARTTKAAMKEAKNAGVYXXXXXXXXGDGT--------ITARGRGAEVALQYGGEVVG-KSKGDRGGTSAPPVQPDEDE---------AQLDPEILALIEKEVGGGIGEGGACFCTDSSDDSXXXXXXXXXXXXXXXXXXXXXXN-NAAEEEATAVAQDRLGEEYGISEKRSGYSYSRLLRYERRHRAQQRAIRAEELESAKXXXXXXXXXXXXXXXXXXXXHDDEFRRSRQGPSSLRGSPTYEDFVDPLEVRRQKRKEARLREGGGVGREYGGNGPGRGRQYISSFEVTDKSSSAKKGGSDSDGSLLDS----DXXXXNGGSHLVLLEGFFPTLADSLRRHLQEKERR 1580
MADYYYEARKHDKWLR+HAKENKARKERMK+FQRAHSRDH QSLIIEG+PCKLYRD AA +V E LMPWNGR DVLIDRFDARAVLDMVPLSPK TGDHREKKGLETFLSFERYRGI+DAQR LGE+EH AVS+QV EKL++IAR ++GEPD AE+ AA+EAQ++R KKA T KAA+KEAKNAGV+ G + +RGRGAEVAL+YGG+VVG KS G AQLDPEILALIEKEVG XXXXXXXXXXXXXXXXXXXX + NA +A + +QD E+YGISEKRSGYSYSRLLRYERRHRAQ RA R E+++AK ++ R G SSLR SPTYEDF DPLE RRQKR+E R R GG R+ GNG GRGRQYISSFE++D + K G SDGSLL S D +GG+HLVLL+ FFPTLAD+LRRHL++KE R
Sbjct: 1 MADYYYEARKHDKWLRKHAKENKARKERMKQFQRAHSRDHHQSLIIEGRPCKLYRDPAAGAVVEGALMPWNGRRDVLIDRFDARAVLDMVPLSPKGTGDHREKKGLETFLSFERYRGIVDAQRVGLGEKEHALAVSKQVEEKLSDIARFKKGEPDAAELAAAKEAQDKRNKKAET-KAAIKEAKNAGVHGHYGPGAGGXXXXXXXGGVPLPSRGRGAEVALKYGGDVVGGKSAGXXXXXXXXXXXXXXXXXXXXXXXXXAQLDPEILALIEKEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHKNADAAQALSASQDLFAEDYGISEKRSGYSYSRLLRYERRHRAQHRANRMAEVDAAKKRKKPKKKADGTPVE-----EENGLSRPYLG-SSLRDSPTYEDFGDPLEARRQKRREDRERAGGSA-RDAAGNGAGRGRQYISSFEISDSKAGGGKSGXXSDGSLLGSESEGDEGGGSGGTHLVLLQNFFPTLADTLRRHLEKKEER 512
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: A0A6H5L0Z8_9PHAE (DRY_EERY domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z8_9PHAE) HSP 1 Score: 292 bits (748), Expect = 1.830e-88 Identity = 154/189 (81.48%), Postives = 171/189 (90.48%), Query Frame = 3
Query: 93 MADYYYEARKHDKWLRRHAKENKARKERMKEFQRAHSRDHQQSLIIEGKPCKLYRDAAASSV-EATLMPWNGRHDVLIDRFDARAVLDMVPLSPKDTGDHREKKGLETFLSFERYRGILDAQRARLGEREHTAAVSEQVREKLAEIARVQQGEPDEAEMLAAREAQNERYKKARTTKAAMKEAKNAGVY 656
MADYYYEARKHDKWLR+HAKENKARKERMK+FQRAHSRDH QSLIIEG+PCKLYRD AA +V E LMPWNGR DVLIDRFDARAVLDMVPLSPKDTGDHREKKGLETFLSFERYRGI+DAQR LGE+EH AVS+QV EKL++IAR ++GEPD AE+ AA+EAQ++R KKA T KAA+KEAKNAGV+
Sbjct: 1 MADYYYEARKHDKWLRKHAKENKARKERMKQFQRAHSRDHHQSLIIEGRPCKLYRDPAAGAVVEGALMPWNGRRDVLIDRFDARAVLDMVPLSPKDTGDHREKKGLETFLSFERYRGIVDAQRVGLGEKEHALAVSKQVEEKLSDIARFKKGEPDAAELAAAKEAQDKRNKKAET-KAAIKEAKNAGVH 188
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: A0A6H5KYK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK4_9PHAE) HSP 1 Score: 192 bits (489), Expect = 6.350e-48 Identity = 163/306 (53.27%), Postives = 189/306 (61.76%), Query Frame = 3
Query: 693 ITARGRGAEVALQYGGEVVGKSKGDRGGTSAPPVQPDEDE--AQLDPEILALIEKEVGGGIGEGGACFCTDSSDDSXXXXXXXXXXXXXXXXXXXXXXN---NAAE--EEATAVAQDRLGEEYGISEKRSGYSYSRLLRYERRHRAQQRAIRAEELESAKXXXXXXXXXXXXXXXXXXXXHDDEFRRSRQG-PSSLRGSPTYEDFVDPLEVRRQKRKEARLREGGGVGREYGGNGPGRGRQYISSFEVTDKSSSAKKGGSDSDGSLLDS----DXXXXNGGSHLVLLEGFFPTLADSLRRHLQEKE 1574
+ +RGRGAEVAL+YGG+VVG AQLDPEILALIEKE XXXXXXXXXXXXXXXXXXXXXX+ NA + +A + AQD E+YGISEKRSGYSYSRLLRYERRHRA RA R E+++AK ++E SR SSLR SPTYEDF DPLE RRQKR+E R R GG R+ GNG GRGRQYISSFE++D + K GS SDGSLL S D +GG+HL+LLE FFPTLAD+LRRHL++K+
Sbjct: 8 LPSRGRGAEVALKYGGDVVGGKSXXXXXXXXXXXXXXXXXXXAQLDPEILALIEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHKNADDLAAQALSAAQDLFAEDYGISEKRSGYSYSRLLRYERRHRALHRANRMAEVDAAKKRKKPKKKADGTPV-------EEENGSSRPYLGSSLRDSPTYEDFGDPLEARRQKRREDRERAGGSA-RDAAGNGGGRGRQYISSFEISDSKAGGGKSGSGSDGSLLGSESEGDEGGGSGGTHLILLENFFPTLADTLRRHLEKKQ 305
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: A0A2I0I6X7_PUNGR (DRY_EERY domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I6X7_PUNGR) HSP 1 Score: 73.9 bits (180), Expect = 8.610e-12 Identity = 44/123 (35.77%), Postives = 70/123 (56.91%), Query Frame = 3
Query: 105 YYEARKHDKWLRRHAKENKARKERMKEFQRAHSRDHQQSLIIEGKPCKLYRDAA---ASSVEATLMPWNGRHDVLIDRFDARAVLDMV--PLSPKDTGDHREKKGLETFLSFERYRGILDAQR 458
++EARK ++ + + R +R F D QQS+ + G C++YRD A+ + L+PWNG+ D+LIDRFD RA+LD + P + E++ LE F++FERYR ++ +R
Sbjct: 2 WHEARKSERKVHDLMDAARKRAQRRAVFLAKRRGDPQQSIQVIGSRCRMYRDDGLYQATQDQQGLIPWNGKEDILIDRFDGRALLDFIREPRHGRAKEKSEEEEELEEFVNFERYRDLIKHRR 124
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: A0A131YL06_RHIAP (Splicing factor, arginine/serine-rich 16 n=1 Tax=Rhipicephalus appendiculatus TaxID=34631 RepID=A0A131YL06_RHIAP) HSP 1 Score: 79.3 bits (194), Expect = 2.200e-11 Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 3
Query: 69 VYFVARRIMADYYYEARKHDKWLRRHAKENKARKERMKEFQRAHSRDHQQSLIIEGKPCKLYRDAA---ASSVEATLMPWNGRHDVLIDRFDARAVLDMVP-LSPKDTGDH--REKKGLETFLSFERYRGIL 446
++F +R + ++EARK ++ +R + K R ER KEF +D Q L + G+ CK++ D A A+ AT+MPW G DV+IDRFD RA LD +P D G E+K E +++ERYR ++
Sbjct: 1 MFFPSRSSRDNMWHEARKQERKIRGMLVDLKKRAERRKEFYERIKQDPAQFLQLHGRRCKIHIDLAIAQAADSPATMMPWQGNRDVMIDRFDVRAHLDAIPEFKTSDEGLELTEEQKEEERQINYERYRTLV 132
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: A0A1E1XRP2_9ACAR (Putative splicing factor arginine/serine-rich n=2 Tax=Amblyomma TaxID=6942 RepID=A0A1E1XRP2_9ACAR) HSP 1 Score: 78.2 bits (191), Expect = 5.590e-11 Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query: 105 YYEARKHDKWLRRHAKENKARKERMKEFQRAHSRDHQQSLIIEGKPCKLYRDAA---ASSVEATLMPWNGRHDVLIDRFDARAVLDMVP-LSPKDTGD--HREKKGLETFLSFERYRGIL 446
++EARK ++ +R + K R ER KEF +D Q L + G+ CK++ D A A+ AT+MPW G DV+IDRFD RA LDM+P P D E+K E +++ERYR ++
Sbjct: 2 WHEARKQERKIRGMLVDLKKRAERRKEFYERIKQDPAQFLQLHGRRCKIHIDLAIAQAADSPATMMPWQGNRDVMIDRFDVRAHLDMIPDYKPSDDVPVLSEEQKEEERQINYERYRTLV 121
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: UPI0011D2C05C (CLK4-associating serine/arginine rich protein-like isoform X2 n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D2C05C) HSP 1 Score: 72.0 bits (175), Expect = 6.250e-11 Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 3
Query: 105 YYEARKHDKWLRRHAKENKARKERMKEFQRAHSRDHQQSLIIEGKPCKLYRDAA---ASSVEATLMPWNGRHDVLIDRFDARAVLDMVPLSPKDTGDHR--EKKGLETFLSFERYRGILDAQR 458
++EAR+ +K + + R +R F D QQS+ G C++YRD A+ + L+PWNG+ D+LIDRFD RA+LD + S + E++ LE F++FERYR ++ +R
Sbjct: 2 WHEARRSEKKVHDMMDAARKRAQRRAVFLAKRRGDPQQSIQAVGSRCRMYRDDGLYQATQDQQGLIPWNGKEDILIDRFDGRALLDFIRESKHSRVKEKSEEEEELEEFVNFERYRDLIKHRR 124
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: A0A1D1XUM7_9ARAE (CLK4-associating serine/arginine rich protein (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XUM7_9ARAE) HSP 1 Score: 73.2 bits (178), Expect = 6.710e-11 Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 3
Query: 207 DHQQSLIIEGKPCKLYRDAA---ASSVEATLMPWNGRHDVLIDRFDARAVLDMVPLSPKDTGDHR------EKKGLETFLSFERYRGIL 446
D QQSL + G C++YRD A+ + L+PWNG+ D+LIDRFD RA+LD + S D+ HR E++ +E F++FERYR ++
Sbjct: 36 DPQQSLQVAGTRCRMYRDDGLYQATQDQQGLIPWNGKQDILIDRFDGRALLDFIRDS--DSRPHRVQEKTEEEEEVEEFVNFERYRDLI 122
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: A0A5E4E422_PRUDU (PREDICTED: CLK4-associating n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4E422_PRUDU) HSP 1 Score: 76.3 bits (186), Expect = 1.030e-10 Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 3
Query: 207 DHQQSLIIEGKPCKLYRDAA---ASSVEATLMPWNGRHDVLIDRFDARAVLDMVPLSPKDTGDHR--EKKGLETFLSFERYRGILDAQRARLGEREHTAAVSEQV 506
D QQS+ + G C+LYRD AS + L+PWNG+ DVLIDRFD RA+LD + S + E++ LE F++FERYR ++ +R + E V+E++
Sbjct: 36 DPQQSIQVVGSRCRLYRDDGLYQASEDQQGLIPWNGKQDVLIDRFDGRALLDFIRESRHLRAQEKSEEEEELEEFVNFERYRDLIKHRRRGFTDEEGLQHVNEEI 140
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Match: A0A8J2RHK7_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RHK7_9CRUS) HSP 1 Score: 77.0 bits (188), Expect = 1.350e-10 Identity = 44/119 (36.97%), Postives = 71/119 (59.66%), Query Frame = 3
Query: 105 YYEARKHDKWLRRHAKENKARKERMKEFQRAHSRDHQQSLIIEGKPCKLYRDAAASSVEATLMPWNGRHDVLIDRFDARAVLDMVPLSPK----DTGDHREKKGLETF-LSFERYRGIL 446
++EARK ++ L+ +++ R ER +E+ D Q L + G+P K++ D A + AT+MPW G+ ++LIDRFD RA LD++P P DT + ++G E S+ERYR ++
Sbjct: 2 WHEARKQERLLKSMMVDHRRRAERRREYYEKTKGDPAQFLQVHGRPMKIHVDPAVADSPATMMPWQGQTEILIDRFDVRAHLDVIPCHPSKNDCDTYQYPGEEGWEERQASYERYRILV 120 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1291.2151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1291.2151.1 >prot_F-serratus_M_contig1291.2151.1 ID=prot_F-serratus_M_contig1291.2151.1|Name=mRNA_F-serratus_M_contig1291.2151.1|organism=Fucus serratus male|type=polypeptide|length=812bp MADYYYEARKHDKWLRRHAKENKARKERMKEFQRAHSRDHQQSLIIEGKPback to top mRNA from alignment at F-serratus_M_contig1291:2713..25432+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1291.2151.1 ID=mRNA_F-serratus_M_contig1291.2151.1|Name=mRNA_F-serratus_M_contig1291.2151.1|organism=Fucus serratus male|type=mRNA|length=22720bp|location=Sequence derived from alignment at F-serratus_M_contig1291:2713..25432+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1291:2713..25432+ >mRNA_F-serratus_M_contig1291.2151.1 ID=mRNA_F-serratus_M_contig1291.2151.1|Name=mRNA_F-serratus_M_contig1291.2151.1|organism=Fucus serratus male|type=CDS|length=4872bp|location=Sequence derived from alignment at F-serratus_M_contig1291:2713..25432+ (Fucus serratus male)back to top |