mRNA_F-serratus_M_contig1290.2150.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 422 bits (1085), Expect = 9.850e-139 Identity = 234/504 (46.43%), Postives = 301/504 (59.72%), Query Frame = 1
Query: 19 KEIASVKKNGVYKLVPASSVSAGQKVVGSRWVNKIKADDLFKRRMVLLEWTEVPGIDCGGTFAPVYRLQSIRMMLGIAAELD--YEVLDVQIAFLNADVDEEVYVKMVPGYETYDKSGVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPCQLL----------------------------------------RKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYFDQPADRLLDEQGKPRRS-------------RYDIFYAINQLARAMFKPSKAHMGAAKHVLRYLAGCVNFPITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTKGSLFCRNMMMELGFTEGFLSLHVYIDNISTLHVVGNRTFSPRAKHIVLRYVFVQELMKKGKVTIHFVKTEQQLADLGTKHLKKYRHRFLIKLIN 1365
+E+ S+ VYKLVP S+V G+K + S+WV K KAD FK R+V W +VPG+DCG T+APV R+QS+RM+ I E + ++ +DV AFL AD+ EEV+V+ PG+E DK G + VMK+ KS Y QSP NWF T+D L IGF +LKSDPC L + +L RFKMT LG+AS LGM + RD+E +TI Q+ Y ILER M TPG G I QP D LLDE+ + RYDI YA QLAR+M KPSK HM AAKH LRYLAG ++F ITY++GGF L ++D+N +P NG+ TSSY+ MLAN P+ F+ GLQ L A S AELVA+A K ++FC NMM ELG + F L VY DN +TLH +GNR+FS R KHI LR+ F++EL+ +GK++IH+V TE LAD+GTKH K+R + L+ LIN
Sbjct: 151 REMKSLSNRKVYKLVPRSAVPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 654
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 431 bits (1109), Expect = 1.250e-133 Identity = 236/499 (47.29%), Postives = 305/499 (61.12%), Query Frame = 1
Query: 1 WEAAVDKEIASVKKNGVYKLVPASSVSAGQKVVGSRWVNKIKADDLFKRRMVLLEWTEVPGIDCGGTFAPVYRLQSIRMMLGIAAELD--YEVLDVQIAFLNADVDEEVYVKMVPGYETYDKSGVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPCQLL---------------------------RKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYFDQPADRLLDEQGKPRRS-------------RYDIFYAINQLARAMFKPSKAHMGAAKHVLRYLAGCVNFPITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTKGSLFCRNMMMELGFTEGFLSLHVYIDNISTLHVVGNRTFSPRAKHIVLRYVFVQELMKKGKVTIHFVKTEQQLADLGTKHLKKYRHRFLIKLINEF 1371
W AA ++E+ S+ VYKLVP S+V +K + S+WV K KAD FK R+V W +VPG+DCG T+APV R+QS+RM+ I E + ++ +DV AFL AD+ EEV+V+ PG+E DK G + VMK+ KS Y QSP NWF T+D L IGF +LKSDPC L +K +L RFKMT LG+AS VLGM + RD+E +TI Q+ Y ILER + TPG G I QP D LLDE+ + RYDI YA QLAR M KPSK HM AAKH LRYLAG ++F ITY++GGF L ++D+N +P NG+ TSSY+ +LAN P+ F+ GLQ L A S AELVA+A ++F NMM ELGF + F L VY DN +TLH +GNR+FS R KHI LR+ F++EL+ +GK++IH+V TE LAD+GTKH K+R + L+ LIN F
Sbjct: 1166 WNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 391 bits (1005), Expect = 2.130e-125 Identity = 215/472 (45.55%), Postives = 294/472 (62.29%), Query Frame = 1
Query: 1 WEAAVDKEIASVKKNGVYKLVPASSVSAGQKVVGSRWVNKIKADDLFKRRMVLLEWTEVPGIDCGGTFAPVYRLQSIRMMLGIAAELDYEV--LDVQIAFLNADVDEEVYVKMVPGYETYDKSGVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPCQLLRKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYFDQPADRLLDEQGKPRR-------------SRYDIFYAINQLARAMFKPSKAHMGAAKHVLRYLAGCVNFPITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTKGSLFCRNMMMELGFTEGFLSLHVYIDNISTLHVVGNRTFSPRAKHIVLRYVFVQELMKKGKVTIHFVKTEQQLADLGTKHLKKYRHRFLIKLINEF 1371
W+AA DKEI S++ VYKLVP + V G V+GS+WV K+K ++ K R+V W +VPG DCGGTFAPV RLQSIRM+ IAAE D +V LDV+ AFL AD++E V+V+M PGYE + + VMK+ KS QSP++W T+D L IGF LKSD C + ++ Y+ D +++ R G +YT IL+R M +C + T G GP + QP + LL+ +GK R +RYDI Y +Q ARAM PSK HMGAAKH+LRYL+G +F ITY+RGGF L A ++AN + NG+ SSYIMM++ P K GLQSL A S AELVA+A K +FC NMM ELGF F S ++ID+ +TL+V+GN+TFS KH+ LR+ ++++++K+G+++IH++ TE LAD+GT++L K RH++LI I F
Sbjct: 317 WKAATDKEIKSLQDLKVYKLVPRTDVPLGHNVIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVV--VLTLYVDD------LLIIR----GGAHHQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 392 bits (1008), Expect = 1.700e-123 Identity = 224/497 (45.07%), Postives = 285/497 (57.34%), Query Frame = 1
Query: 1 WEAAVDKEIASVKKNGVYKLVPASSVSAGQKVVGSRWVNKIKADDLFKRRMVLLEWTEVPGIDCGGTFAPVYRLQSIRMMLGIAAELDYEVLDVQIAFLNADVDEEVYVKMVPGYETYDKSGVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPCQLL---------------------------RKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYFDQPADRLLDEQGKPRRS-------------RYDIFYAINQLARAMFKPSKAHMGAAKHVLRYLAGCVNFPITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTKGSLFCRNMMMELGFTEGFLSLHVYIDNISTLHVVGNRTFSPRAKHIVLRYVFVQELMKKGKVTIHFVKTEQQLADLGTKHLKKYRHRFLIKLINEF 1371
W AA ++E+ S+ VYKLVP S V +K + S+WV K KAD FK R+V W +VPG+DCG T+APV R+QS+RM+ I +D + F D G + VMK+ KS Y QSP NWF T+D L IGF +LKSDPC L +K +L RFKMT LG+AS VL M + RD+E +TI Q+ Y ILER M TPG G I QP D LLDE+ + RYDI YA QLAR M KPSK HM AAKH LRYLAG ++F ITY++GGF L ++D+N +P NG+ TSSY+ MLAN P+ F+ GLQ L A S AELVA+A K ++FC NMM ELGF + F L VY DN +TLH +GNR+FS R KHI LR+ F++EL+ +GK++IH+V+TE LAD+GTKH +R + L+ LIN F
Sbjct: 524 WNAAAEREMKSLSDRKVYKLVPRSGVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACIT-------VDFNLIFDQMD------------------DGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 352 bits (904), Expect = 2.210e-114 Identity = 199/429 (46.39%), Postives = 255/429 (59.44%), Query Frame = 1
Query: 211 VYRLQSIRMMLG-IAAELDYEVLDVQIAFLNADVDEEVYVKMVPGYETYDKS-GVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPCQLL---------------------------RKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYFDQPADRLLDEQGKPRRS-------------RYDIFYAINQLARAMFKPSKAHMGAAKHVLRYLAGCVNFPITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTKGSLFCRNMMMELGFTEGFLSLHVYIDNISTLHVVGNRTFSPRAKHIVLRYVFVQELMKKGKVTIHFVKTEQQLADLGTKHLKKYRHRFLIKLINEF 1371
++R S+R+ + L ++ +DV AFL AD+ EEV+V+ PG+E DK G + VMK+ KS Y QSP NWF T+D + IGF +LKSDPC L +K +L RFKMT LG+AS VLGM + RD+E +TI Q+ Y ILER M TPG G I QP D LLDE+ + RYDI YA QLAR M KPSK HM AAKH LRYLAG ++F ITY++GGF L ++D+N +P NG+ TSSY+ MLAN P+ F+ GLQ L A S AELVA+A K ++FC NMM ELGF + F L VY DN +TLH +GNR+FS R KHI LR+ F++EL+ +GK++IH+ TE LAD+GTKH K+R L+ LIN F
Sbjct: 7 IFRFYSLRVGAPTVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKEDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE) HSP 1 Score: 332 bits (851), Expect = 1.550e-99 Identity = 195/524 (37.21%), Postives = 284/524 (54.20%), Query Frame = 1
Query: 1 WEAAVDKEIASVKKNGVYKLVPASSVSAGQKVVGSRWVNKIKADDLFKRRMVLLEWTEVPGIDCGGTFAPVYRLQSIRMMLGIAAELDYEV--LDVQIAFLNADVDEEVYVKMVPGYETYDKSGVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPCQLLRKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYFDQPADRLLDEQGKPRRS-------------RYDIFY-------------------------AINQLARAMFKPSKAHMGAAKHVL------------------------RY--LAGCVNF---PITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTKGSLFCRNMMMELGFTEGFLSLHVYIDNISTLHVVGNRTFSPRAKHIVLRYVFVQELMKKGKVTIHFVKTEQQLADLGTKHLKKYRHRFLIKLIN 1365
W A ++EIAS+K+ VYKLVP ++V G+K S+WV K KAD FK R+V W +VPG+ CG T+APV RLQSIRM+ IA + + E+ +DV AFL D+ E V+V+ PG+E +K G + VM++++S Y QSP NWF T+D L IGF SLKSD C L FKMT +G+ VLGM + +D G +TI Q+ Y+ ILER M C + TPG G + QP D LLDE+ R RYD+ + I+Q A + + M K + RY + GC+ + + Y G L ++++N +P NG+ +S Y+ ML N P+ FK G+Q A S AEL+A+A K ++FC N++ ELG + F + +Y DN +TLH +GNR+FS R KHI LR+ +++EL+ +G+++IH++ T+ +AD+GTKHL K+R + L+ +I+
Sbjct: 650 WNTAAEREIASLKERQVYKLVPPTAVPPGRKRTTSKWVFKRKADGSFKGRLVAQGWNQVPGLGCGSTYAPVCRLQSIRMLACIAVQFNLELDQIDVFTAFLYVDILENVFVEQPPGFEVKNKDGGDLVMQLQESLYGLAQSPSNWFHTIDPFLVEIGFVSLKSDTCVYL----------FKMTNMGEVKLVLGMDIKKDCNRGTLTISQEAYSKSILERFGMSECKPISTPGYGSELSNKQPEDTLLDEEETRRYQGIVGCLMYIAQVLRYDVMFKMTNMGEVKLVLGMDIKKDCNRGTLTISQEAYSKSILERFGMSECKPISTPGYGSELSNKQPEDTLLDEEETRRYQGIVGCLMYIAQVLRYDVIGSKLATFSESNWANNPDNGKSSSCYLTMLGNAPVSFKSGIQGPTAMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHLNKHRLKHLLDIIS 1163
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE) HSP 1 Score: 317 bits (812), Expect = 3.150e-97 Identity = 189/502 (37.65%), Postives = 277/502 (55.18%), Query Frame = 1
Query: 1 WEAAVDKEIASVKKNGVYKLVPASSVSAGQKVVGSRWVNKIKADDLFKRRMVLLEWTEVPGIDCGGTFAPVYRLQSIRMMLGIAAELDYEV--LDVQIAFLNADVDEEVYVKMVPGYETYDKS-GVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPC---------------------------QLLRKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYFDQPADRLLDEQGKPRR-------------SRYDIFYAINQLARAMFKPSKAHMGAAKHVLRYLAGCVNFPITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTKGSLFCRNMMMELGFTEGFLSLHVYIDNISTLHVVGNRTFSPRAKHIVLRYVFVQELMKKGKVTIHFVKTEQQLADLGTKHLKKYRHRFLIKLINEFRA 1377
W++A+D E+ ++ K+ V+K V S V + + +R+V KIKAD FK R+V + G G +APV RL SIRM+ IA E +EV LDV AFLNA D +VYV+ PG E D + G V K+ KS Y QSP W ++D L G++ +SDPC +++ + KK+LMD F+MT +G+ +V+G+ V RD E+G + I Q Y DIL+R M N V TPG G + +QP D+LL + K R +RYD+ YA++QL RA P++ HM AAKH+LRYL G + PI Y++G F L +TD++ +P NGR T+ Y+ L G I + Q+L AQ+ AEL A + + + +++ N M E+GF + F S+ + D+ L V N FS R KHI LR+ F++EL K ++T+H + LAD+ TKHL K R +++LI +++
Sbjct: 234 WKSAIDTEMGNLAKHKVFKKVRISLVPKDEDIFDTRFVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGF-KTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLIKDYKC 734
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 327 bits (839), Expect = 3.430e-96 Identity = 200/496 (40.32%), Postives = 261/496 (52.62%), Query Frame = 1
Query: 1 WEAAVDKEIASVKKNGVYKLVPASSVSAGQKVVGSRWVNKIKADDLFKRRMVLLEWTEVPGIDCGGTFAPVYRLQSIRMMLGIAAELD--YEVLDVQIAFLNADVDEEVYVKMVPGYETYDKSGVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPCQLL---------------------------RKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYFDQPADRLLDEQ---------GKPRRSRYDIFYAINQLARAMFKPSKAHMGAAKHVLRYLAGCVNFPITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTKGSLFCRNMMMELGFTEGFLSLHVYIDNISTLHVVGNRTFSPRAKHIVLRYVFVQELMKKGKVTIHFVKTEQQLADLGTKHLKKYRHRFLIKLINEFR 1374
W AA ++E+ S+ VYKLVP S+V +K + S+WV K KAD FK R+V W +VPG+DCG T+APV R+QS+RM+ I E + ++ +DV AFL AD+ EEV+V+ PG+E DK G + VMK+ KS Y QSP NWF T+D L IGF +LKSDPC L +K +L RFKMT LG+AS VLGM + RD+E +TI Q+ Y ILER M TPG G I QP LLDE+ G P + Y LAR M KPSK HM AAKH LR+L G ++F ITY++GGF L ++D+N +P NG+ T+SY+ ML N P+ S G H + R S R KHI LR+ FV+EL+ +GK++IH+V TE LAD+GTKH K+R + L+ LIN R
Sbjct: 1331 WNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPDYTLLDEKETRKYQGIVGSPMYIAHXDQYTW--LARPMAKPSKVHMVAAKHTLRFLVGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTASYLTMLVNAPM------------SXAGER---------------------------------------SHELQVRAASSRTKHIALRFFFVRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLVDLINNLR 1773
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE) HSP 1 Score: 301 bits (771), Expect = 1.410e-94 Identity = 172/376 (45.74%), Postives = 217/376 (57.71%), Query Frame = 1
Query: 1 WEAAVDKEIASVKKNGVYKLVPASSVSAGQKVVGSRWVNKIKADDLFKRRMVLLEWTEVPGIDCGGTFAPVYRLQSIRMMLGIAAELDYEV--LDVQIAFLNADVDEEVYVKMVPGYETYDKSGVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPCQLLRKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYFDQPADRLLDEQGKPRRS-------------RYDIFYAINQLARAMFKPSKAHMGAAKHVLRYLAGCVNFPITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTK 1083
W AA ++EIAS+K+ VYKLVP ++V G+K + S+WV K KAD FK R+V W +VPG+DCG T+APV RLQSIRM+ I + + E+ +DV AF AD+ E V+V+ PG+E DK G + VM+++KS Y Q NWF T+D L KSD C L FKMT +G+ VLGM + RD G +TI QK YT ILER M C TPG G + QP D LL E+ R RYDI YA QLAR M KPSK HM AAKH LRY+AG NF ITY+ GF L ++D+N +P NG+ TS Y+ ML N P+ K G+Q A S AEL+A+A K
Sbjct: 65 WNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIVVQFNLELDQMDVSTAFFYADILENVFVERPPGFEVKDKDGGDLVMQLQKSLYGLAQIASNWFHTIDPFLVENISVPRKSDTCVYL----------FKMTDMGEVKLVLGMEIKRDHNQGTLTISQKAYTKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIVGCLMYIAQVLRYDIMYATGQLARPMEKPSKIHMVAAKHTLRYVAGTTNFRITYKSEGFKLATFSDSNWANNPDNGKSTSCYLTMLGNTPVSLKSGIQGPTAMSTMEAELIASALAMK 430
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE) HSP 1 Score: 296 bits (758), Expect = 5.870e-86 Identity = 176/423 (41.61%), Postives = 231/423 (54.61%), Query Frame = 1
Query: 1 WEAAVDKEIASVKKNGVYKLVPASSVSAGQKVVGSRWVNKIKADDLFKRRMVLLEWTEVPGIDCGGTFAPVYRLQSIRMMLGIAAELDYEV--LDVQIAFLNADVDEEVYVKMVPGYETYDKSGVNFVMKVRKSHYDF*QSPKNWFGTMDDHLSNIGFRSLKSDPCQL-------LRKLKKQLMDRFKMTYLGDASKVLGMMVTRDQENGMITIDQKDYTDDILERDVMPNCNVVFTPGVGPNIYF-----------------------DQPADRLLDEQGKPRRS-------------------------RYDIFYAINQLARAMFKPSKAHMGAAKHVLRYLAGCVNFPITYRRGGFTLMAYTDANKRGHPGNGRLTSSYIMMLANGPIIFKVGLQSLLAQSIRGAELVATATTTKGSLFC 1098
W AA ++EIAS+K+ V+KLVP ++V G+K + SRWV K K D FK R+V W +VPG+DCG T+APV RLQSIRM+ IA + + E+ +DV AFL AD+ E V+V+ PG+E DK G + VM+++KS Y QSP NWF T+D L I + +L D L + +KK+L RFKMT +G+ VLGM + RD+ G +TI Q+ YT ILER M C TPG GP + DQ A + R RYDI YA QLAR M KPSK HM AAKH LRY+AG +F ITY+ GF L +D+N +P NG+ T+ Y+ ML N P+ FK G+Q A S AEL+A+A K ++FC
Sbjct: 851 WNAAAEREIASLKERQVFKLVPRTAVPPGRKRIKSRWVFKRKVDGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIVYLTLYVDDLLLASNNSNAISMIKKKLKQRFKMTDMGEVKLVLGMEIKRDRNQGTLTISQEAYTKSILERFGMSECKPTSTPGXGPQPRYPDDFPESVYQVHLREIRDVGMQTDQHAWLWFGALQQATRGHSAKRGGNQTLSGHRGVLVYIAQVLRYDIMYATGQLARPMAKPSKIHMVAAKHTLRYVAGTTDFRITYKSEGFKLATLSDSNWANNPDNGKSTACYLTMLGNAPVRFKSGIQGPTAMSTMEAELIASALAMKEAVFC 1273 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1290.2150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1290.2150.1 >prot_F-serratus_M_contig1290.2150.1 ID=prot_F-serratus_M_contig1290.2150.1|Name=mRNA_F-serratus_M_contig1290.2150.1|organism=Fucus serratus male|type=polypeptide|length=314bp MDDHLSNIGFRSLKSDPCQLLRKLKKQLMDRFKMTYLGDASKVLGMMVTRback to top mRNA from alignment at F-serratus_M_contig1290:244159..245618- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1290.2150.1 ID=mRNA_F-serratus_M_contig1290.2150.1|Name=mRNA_F-serratus_M_contig1290.2150.1|organism=Fucus serratus male|type=mRNA|length=1460bp|location=Sequence derived from alignment at F-serratus_M_contig1290:244159..245618- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1290:244159..245618- >mRNA_F-serratus_M_contig1290.2150.1 ID=mRNA_F-serratus_M_contig1290.2150.1|Name=mRNA_F-serratus_M_contig1290.2150.1|organism=Fucus serratus male|type=CDS|length=1884bp|location=Sequence derived from alignment at F-serratus_M_contig1290:244159..245618- (Fucus serratus male)back to top |