mRNA_F-serratus_M_contig1290.2145.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1290.2145.1
Unique NamemRNA_F-serratus_M_contig1290.2145.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: D7FT29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT29_ECTSI)

HSP 1 Score: 461 bits (1185), Expect = 6.550e-160
Identity = 244/379 (64.38%), Postives = 275/379 (72.56%), Query Frame = 1
Query:    7 MGSFLLLDATDQAITVCWEREVGVSTEAVQMK----PTDEG--------DGAE-----------------------------WTTLSDSLATSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEGVQQQPPPAVKLREAGALVMEWSSVPAAGGYEIQMSASGGRWATIAPCFGSTLLRKKGLD-SKPYRFRIRPVFKPASDGDGQEAAEEKRWGWSPASTPASPAVLNSFLSSSIPQQLVRRGKEVVSRDVLAGKVVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKAFEVVFLSLDSDEASMERYHAGMPWLAVPFEDPFREEFASAKGVNSVPRLIVTGRRGQEISSNAVGMTWDQLVAWESQG 1017
            M +FLLLDATDQAIT+CWER   VS E VQMK    P ++         DG+E                             W TLS SL +SALRK KL PGT YVFRRR+R+ +   WGPWS+ SEPF TLSEG  Q   PAVKLREAGALVMEW +VP+A GYEIQMS SG  W T+   FGSTLLRKKGL+ SK YRFR+RPVF     G  QE      WGWSP+S  ASPAVLN+FL S  P +LV RGK VVSRD+LAGK+VAFYFSASWCGPCRKYTPQLAALY+RAKAQHKAFEVVF+SLD DE SM+RYHAGMPW AVP++ PFRE+FAS+KGVNSVPRL+VTGRRGQEI+SNAVGMTW+QLV WE+ G
Sbjct:    1 MATFLLLDATDQAITLCWERGPDVSVEEVQMKMKTTPANDQQRQQQEVKDGSEVGNEVAPSSGSXXXXXXXXXXXXXXXXXDWVTLSKSLGSSALRKKKLAPGTEYVFRRRARKQEEEEWGPWSKTSEPFRTLSEGEMQPSAPAVKLREAGALVMEWPAVPSASGYEIQMSTSGSEWCTLTASFGSTLLRKKGLEGSKQYRFRLRPVF----GGGTQEG--RGGWGWSPSSDLASPAVLNAFLRSQAPAELVGRGKAVVSRDILAGKIVAFYFSASWCGPCRKYTPQLAALYTRAKAQHKAFEVVFVSLDGDEESMDRYHAGMPWPAVPYDHPFREDFASSKGVNSVPRLVVTGRRGQEIASNAVGMTWEQLVTWEAHG 373          
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: A0A6S9IW74_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IW74_HETAK)

HSP 1 Score: 224 bits (571), Expect = 1.240e-67
Identity = 130/305 (42.62%), Postives = 175/305 (57.38%), Query Frame = 1
Query:  118 DGAEWTTLSDSLATSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEGVQQ-QPPPAVKLREAGALVMEWSSVPAAGGYEIQMS-ASGGRWATIAPCFGSTLLRKKGLDSKP-YRFRIRPVFKPASDGDGQEAAEEKRWGWSPASTPASPAVLNSFLSSSIPQQLVRRGKEVVSRDVLAGKVVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKAFEVVFLSLDSDEASMERYHAGMPWLAVPFEDPFREEFASAKGVNSVPRLIVTGRRGQEISSNAVGMTW-DQLVA-WESQG 1017
            D   WTTLS S   + ++K  L PG +Y FR RSR      W  +S  S+P  TL  G  + +  P +   E GA+++ W  V  A  YE+Q+S A+   W T++       ++KKGLD+   Y FR+RP+F            +   W +SP S+  SP +L+  LSS +P  L+    + VS+  LAGKVVA YFSA WCGPCRK+TPQLA  Y++ KA  + FEVVF+S D D  SM  Y + MPWLAVPF+D  RE+  S   V+ +PRL+V G  G  ++ NAVGM   +QLV  W S G
Sbjct:   13 DNINWTTLSSSFKGNKVKKKNLEPGKAYTFRYRSRDRL--GWNLFSPSSKPSWTLQSGQNRLENGPQIHAVETGAVMLGWQCVEGASSYELQISDAAYPVWQTVSTNIQHPAVKKKGLDANTKYIFRVRPLF---------AHEDSASWAFSPPSSEISPPILSQLLSSMLPVNLINNQNQAVSQGALAGKVVAIYFSAHWCGPCRKFTPQLATFYNQMKAARRPFEVVFVSCDGDAGSMMSYFSEMPWLAVPFDDDKREQIQSDYQVSGIPRLMVVGPGGAIVAENAVGMPLSEQLVTHWASGG 306          
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: L1IDF0_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IDF0_GUITC)

HSP 1 Score: 184 bits (466), Expect = 5.560e-52
Identity = 117/330 (35.45%), Postives = 169/330 (51.21%), Query Frame = 1
Query:   28 DATDQAITVCWEREVGVSTEAVQMKPTDEGDGAEWTTLSDSLATSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEGVQQQPPPAVKLREAGALVMEWSSVPAAGGYEIQM-SASGGRWATIAPCFGSTLLRKKGLDSKP-YRFRIRPVFKPASDGDGQEAAEEKRWGWSPASTPASPAVLNSFLSSSIPQQLVRRGKEVVSRDVLAGKVVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKAFEVVFLSLDSDEASMERYHAGMPWLAVPFEDPFREEFASAKGVNSVPRLIVTGRRGQEISSNAVG--MTWDQLVAW 1005
            D   +A+T+ W +        VQ+K   + +G ++TT+SDSL ++ +RK  L P T Y  R R R A    W  + EP    T   + V++   P V  R+  ++ ++W + P    Y +++ S     W TI+    + ++RKK L+    Y FR++P     ++G G        W +SP S  A  A L  FLS+ +   LV           LAG VVA Y SASWCGPCR++TPQL+  Y++ K   K FEVVFLS D D  S   Y   MPWLAVPF+   RE    A  V  +P+L++ G  G  +  NAVG  +   +L +W
Sbjct:    8 DVEAEAVTLSWSKVPNAVKYEVQIK---QEEGGDFTTISDSLTSTLVRKKNLKPNTEYFARVRHRDALD--WSGFCEPVSFHTLAGQDVKRLEHPQVVSRDGESITLQWPTAPDCESYTVEIRSDKDPTWRTISDHLKNNIVRKKNLEKHVMYYFRVKPNL---AEGSGS-------WFFSPPSEGAMLADLPPFLSNLLSPTLVDAQGTSKPVSSLAGCVVALYCSASWCGPCRQFTPQLSQFYTQMKQLGKPFEVVFLSCDRDSKSFTNYFGHMPWLAVPFDSDKRENALGALQVEGIPKLVIVGANGMVLQDNAVGTPLNAQKLDSW 322          
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: A0A7S1IM31_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IM31_9EUGL)

HSP 1 Score: 184 bits (466), Expect = 6.880e-52
Identity = 119/334 (35.63%), Postives = 167/334 (50.00%), Query Frame = 1
Query:   28 DATDQAITVCWEREVGVSTEAVQMKPTDEGDGAEWTTLSDSLATSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEGVQQQPPPAVKLREAGALVMEWSSVPAAGGYEIQM-SASGGRWATIAPCFGSTLLRKKGLDS-KPYRFRIRPVFKPASDGDGQEAAEEKRWGWSPASTPASPAVLNSFLSS--SIPQQLVRRGKEVVSRDVLAGKVVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKAFEVVFLSLDSDEASMERYHAGMPWLAVPFEDP-FREEFASAKGVNSVPRLIVTGRRGQEISSNAVG--MTWDQLVAWE 1008
            +A    +T+ W   V  +   VQ+K    G   +W T++    +  LRK  LLP T+Y FR R++ +    +G WS P+    TL EG QQ   P ++  +  +L ++W +VP A GYE+Q    S   W T      ST +RKK L+  K Y +R++P           EA   K W +S    P     ++S         + LV      V  + LAGKVVA Y SASWC PC+++TPQLA  Y+  K +   FEVVF+S+D D AS   Y   MPW+AV ++D   R+       V  +PRLIV G  GQ +  NAV   +TW     W+
Sbjct:    8 EAEVSCLTIGWLPVVNATKYEVQIKG---GPDTDWRTITSEFTSCLLRKKNLLPATTYQFRLRAQDSA--GFGEWSAPTTDLQTLPEGTQQLEAPQLQSADGVSLTIKWEAVPDATGYEVQFREQSKPEWTTAIASISSTAMRKKNLEERKAYLWRVKP--------SAPEAVSTK-WAFSRIGGPFQVPTVSSTCVQLFGTGESLVTNMGHSVPLNTLAGKVVAIYCSASWCPPCKQFTPQLAHFYNAVKNEGHGFEVVFVSMDRDRASWLGYLNTMPWIAVDYDDAQTRQAIPQRYNVQGIPRLIVFGATGQMLEENAVQTPLTWQTWGCWQ 327          
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: A0A7S0E8P9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E8P9_9CRYP)

HSP 1 Score: 180 bits (456), Expect = 9.130e-51
Identity = 117/310 (37.74%), Postives = 162/310 (52.26%), Query Frame = 1
Query:   91 VQMKPTDEGDGAEWTTLSDSLATSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEG-VQQQPPPAVKLREAGALVMEWSSVPAAGGYEIQM-SASGGRWATIAPCFGSTLLRKKGLDSKP-YRFRIRPVFKPASDGDGQEAAEEKRWGWSPASTPASPAVLNSFLSSSIPQQLVRRGKEVVSRDVLAGKVVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKAFEVVFLSLDSDEASMERYHAGMPWLAVPFEDPFREEFASAKGVNSVPRLIVTGRRGQEISSNAVG--MTWDQLVAW 1005
            VQ+K   + DG ++TT+SDSL ++ +RK  L P T Y  R R R A    W  + EP  PF TL+   V +   P +  ++A +L ++W +VP    Y ++M S     W  I+    + ++RKK LD    Y FR++P              E   W +SP S  A+ A L  FLS+ +   L+           LAG VVA Y SASWCGPCR++TPQL+  Y++ K   K FEVVFLS D D  S   Y   MPWLAVPF+   RE    A  V  +P+L++ G  G  +  NAVG  +   +L +W
Sbjct:    6 VQIK---QEDGGDFTTISDSLTSTLVRKKNLKPNTQYFARVRHRDALD--WSNFCEPV-PFQTLTGAEVNRLENPKIVSKDAESLTVQWPTVPDCESYTVEMRSDKEPLWRPISDHLKNNIVRKKNLDKHVMYYFRVKPNL----------GVESGSWFFSPPSEGATLADLPPFLSNLLTPTLIDAQGTSKPVSSLAGSVVALYCSASWCGPCRQFTPQLSQFYTQMKQLGKPFEVVFLSCDRDSKSFSNYFGHMPWLAVPFDSDKRENALGALQVEGIPKLVIVGANGMVLQDNAVGTPLNAQKLDSW 299          
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: A0A7S4K6K6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6K6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 7.530e-47
Identity = 128/355 (36.06%), Postives = 179/355 (50.42%), Query Frame = 1
Query:   19 LLLDATDQAITVCWEREVGVSTEAVQMK-PTDEGDGAEWTTLSDSLATSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEGVQQQPPPAVKLREAGALVMEWSSVPAAG--------GYEIQMSAS-GGR-WATIAPCFGSTLLRKKGLDSK-PYRFRIRPVFKPASDGDGQEAAEEKRWGWSPASTPASPAVLNSF---LSSSIPQQLVRRGKEVVS---RDVLAGK-VVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKA--FEVVFLSLDSDEASMERYHAGMPWLAVPFEDPFREEFASAKGVNSVPRL-IVTGRRGQEISSNAVGMT-----WDQLVA 1002
            +LLDATD ++TV W    G     +Q +  +D  +G ++ TLS++L ++  RK  L P +++ FR RS       W    E     T   + ++ + P A       A+V  W + P  G        GYE+QM  + GGR W T+AP  G   +RKK L S+  Y+FR+RPV    +  DG+ A       +SP S P     L+     L S +    + RG    +    D LAGK  V FY SA WCGPCR++TPQL   Y   K Q      +VVFLS D DE S + Y++ MPWLAVP++   RE   +   V  +PRL ++ GR G+ I  NAVG +     W QL +
Sbjct:    6 VLLDATDDSLTVSWPSVAGADRYVLQYRRESDSEEGGDYETLSENLKSTQARKRNLPPESAFSFRARSSSGADGEWIGHEESFRLLTAAEQALRMEAPTATADGNQAAVV-RWKA-PTGGAEAGTSVDGYELQMRENDGGRGWCTVAPRLGGIEVRKKNLISRLGYQFRVRPV----NPSDGRNA-------FSPPSDPLVGRTLSEGMRRLFSDLEDGALLRGGTTTNIPLDDALAGKEFVLFYASAHWCGPCRQFTPQLTNWYKSVKRQPAGTGVDVVFLSADHDEGSFKSYYSTMPWLAVPYDSDAREGLMAHIRVQGIPRLCVLDGRTGRIIEDNAVGKSLDINRWRQLAS 347          
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: A0A7S0QF75_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QF75_9CRYP)

HSP 1 Score: 159 bits (401), Expect = 6.340e-42
Identity = 101/315 (32.06%), Postives = 158/315 (50.16%), Query Frame = 1
Query:   94 QMKPTDEGDGAEWTTLSDSLATSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEGVQQQPPPAVKLREAGALVMEWSSVPAAGGYEIQ----MSASG--GRWATIAPCFGSTLLRKKGLDSKP-YRFRIRPVFKPASDGDGQEAAEEKRWGWSPASTPASPAVLNSFLSSSIPQQLVRRGKEVVSRDVLAGKVVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKAFEVVFLSLDSDEASMERYHAGMPWLAVPFEDPFREEFASAKGVNSVPRLIVTGRRGQEISSNAVG--MTWDQLVAWES 1011
            ++ P  E     W T+S++L +S ++K  L+PGT +  R R R +    W  +S P   F T+ E   +   P++   ++ ++ ++W  V  A  Y +Q    +S+ G    W  + P     ++RKK L+S   Y FR+ P F   SD          RW +SP S   S      +  + +  +LV      +  + LAG  +  Y SASWCGPCR++TP L + Y+ A+A  + F+++F+S D D+ S + Y + MPWLA+PFE   RE       V  +PRL++    G+    NAV   +T  QL AW S
Sbjct:   48 EVPPDCELPNEMWKTVSETLKSSLIKKKNLMPGTWFAARVRYRDSID--WNSFSLPVF-FRTIQETDHRMEAPSLHSSDSQSITVQWIPVEHANSYALQYRNSISSDGHPSDWVPL-PAITGNIIRKKNLNSDGVYCFRVIPNFNEVSD----------RWAFSPPSDGFSVCRFPLYTKNLLGMKLVDAAGNEILAESLAGHTLGIYASASWCGPCRQFTPSLISFYNEARANGRKFQIIFVSCDRDKQSFDSYFSKMPWLAIPFESEARENALKEMQVQGIPRLMILNAEGRTAEVNAVQSRLTLGQLDAWSS 348          
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: A0A0L0G4C2_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G4C2_9EUKA)

HSP 1 Score: 154 bits (388), Expect = 7.350e-39
Identity = 116/341 (34.02%), Postives = 162/341 (47.51%), Query Frame = 1
Query:   61 EREVGVSTEAVQMKPTDEGDGAE--WTTLSD-----SLATSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEGVQQQPPPAVKLREAGALVMEWSS--VP-AAGGYEIQM-SASGGRWATIAPCFGSTLLRKKGLDS-KPYRFRIRPVF---KPASDGDGQEAAEEKRWGWSPASTPASPAVLNSFLSSSIPQQ--------LVRRGKEVVSRDVLAGKVVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKAFEVVFLSLDSDEASMERYHAGMPWLAVPFEDP-FREEFASAKGVNSVPRLIVTGRRGQEISSNAVG--MTWDQLVAW 1005
            E   GV  +   ++   EGD  +  W+  +D      + +  +RK  L P T Y FR      +V     ++ P+E + TL     +   P ++  E+ ALV+EW +  VP     Y++QM SA    W+ +A    ST +RK+ LD    Y FR+R V    K A  G   + + +     SP S P+       F +   P Q        LV    E      L+GK VA Y SASWCGPCR+YTP+L  +Y   K +   FEVVF S D D  SM+ Y A MPWLA+P+E+    E       V  VPRLIV    GQ + +N V   +T + +V W
Sbjct:  190 EESRGVCLQFRSLRKKREGDAGDLSWSKWADIAQGKPITSRIIRKKNLEPNTLYTFR-----TKVDGQRSYAMPTEEWRTLEISTARPTQPQLRAPESSALVVEWKAYLVPNCTVKYKLQMRSADDAEWSDVASNLTSTSVRKRNLDKDNTYSFRVRAVITKNKKAESGSDTDTSAQDDVTLSPYSVPS------EFFALRPPTQWDYLFGKSLVNARGESEPTQSLSGKCVALYCSASWCGPCRQYTPKLTQMYEDFKKKGLQFEVVFASADRDATSMQAYFAKMPWLAIPYENQEIIENIMRVYEVKGVPRLIVFDANGQVVMANGVQQPLTENMIVQW 519          
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: A0A2R5GKM3_9STRA (Thiol-disulfide oxidoreductase resA n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKM3_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.790e-37
Identity = 114/331 (34.44%), Postives = 161/331 (48.64%), Query Frame = 1
Query:   34 TDQAITVCWE-REVGVSTEAVQMKPTDEGDGAEWTTLSDSLATSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEGVQQQPPPAVKLREAG---ALVMEWSSVPAAGGYEIQM----SASGGRWATIAPCFGSTLLRKKGLDSKPYRFRIRPVFKPASDGDGQEAAEEKRWGWSPASTPASPAVL----NSFLSS-SIPQQLVRRGKE-VVSRDVLAGKVVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKAFEVVFLSLDSDEASMERYHAG--MPWLAVPFEDPFREEFASAKGVNSVPRLIVTGRRGQEISSNAVG 978
            +D ++T+ W  R+ G      Q+   +EG   EW TLSD +AT  LRK  L   T   FR R+  A   +WGP+S+P E        V   P       +     A+++ W ++  A  + + M    SA    W  ++       +RKK LD+  Y FR R V+K     DG          WS  S P++  V     +SF+     PQ  + RGKE V +   LAGK+V FYFSA WCGPCR+ T  +   Y++AKA+    EVV +S D D     +Y+ G  MPWLA+PF+   RE+      V+ +P+L V    G  +S NA G
Sbjct:   28 SDGSVTLEWRPRDAGAK---YQVDVREEG-AEEWRTLSDKVATPFLRKKTLK--TKASFRVRAANADG-SWGPFSDPVELEPNPEGSVMAAPTAGTPTGQDDGKFAVMISWPALAGAERFAVDMRAAQSADSFAWKQLSDSLKGNSVRKKNLDAGEYVFRYR-VYK-----DGA---------WSQVSAPSATVVTVPTHDSFMQLLGGPQATLLRGKERVPASAALAGKIVLFYFSAGWCGPCRQQTGMMMPWYNQAKAEGLPVEVVLISADRDAGGFTQYYEGTPMPWLALPFQASEREQLMGRFQVSGIPKLTVFAPNGAMLSDNAAG 336          
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Match: A0A1Z5JP17_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP17_FISSO)

HSP 1 Score: 137 bits (346), Expect = 3.820e-34
Identity = 119/352 (33.81%), Postives = 164/352 (46.59%), Query Frame = 1
Query:   22 LLDATDQAITVCWEREVGVSTEAVQMKPTDEGDGA--EWTTLSDSLATSALRKNKLLPGTS-----YVFR-----RRSRQAQVRAWGPWSEPSEPFTTLSEGVQ--QQPPPAVKLREAG-ALVMEWSSVPAAGGYEIQM--SASGGRWATIAPCFGSTLLRKKGLDSKP-YRFRIRPVFK--PASDGDGQEAAEEKRWGWSPASTPASPAVLNSFLSSSIPQQLVRRGKEVVSRDVLAGK-VVAFYFSASWCGPCRKYTPQLAALYSRAKAQHKAFEVVFLSLDSDEASMERYHAGMPWLAVPFEDPFREEFASAKGVNSVPRL-IVTGRRGQEISSNAVGMTWDQLVAWES 1011
            L+DATD +IT+ W          +Q    D  + A  ++ TLSD L ++  +K  L  GT+     Y FR     + S  + +     W   ++ F  L+   Q  +  PP V L  A  AL++ W     A  Y +QM  +  G  W TIA  F +T ++KK L +   Y+FR+RP  +  P S      AA     G            L    SSS    LV         D L GK  V  Y SASWCGPCR++TP+L+  Y+ +   +K  EVVFLS D D  S + Y++ MPWLAV  E+  REE  S   V  +P L ++  R G+ I  NAV    D +  W S
Sbjct:    5 LVDATDDSITISWTAVKDADRYVLQYCKADSDNNANSDFETLSDKLTSTQAKKKNLTSGTNETSGRYFFRVGALLQGSDSSSLPTT--WITHADAFELLTSDAQTSRPHPPTVTLAGANDALIISWKPHDGATDYAVQMRENIGGSEWVTIASNFSNTQVKKKNLSNPSGYQFRVRPNLEGLPYSSPSTPVAAIGLSDGIKRLFRSLENGTLLKDSSSSSGIPLV---------DALGGKEFVLLYASASWCGPCRQFTPKLSKWYN-SLGPNKTVEVVFLSADHDANSFKSYYSHMPWLAVAHEEDTREELMSYIRVKGIPHLAVLDARTGRIIEENAVSKPLD-INRWRS 343          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1290.2145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT29_ECTSI6.550e-16064.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S9IW74_HETAK1.240e-6742.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
L1IDF0_GUITC5.560e-5235.45Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S1IM31_9EUGL6.880e-5235.63Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0E8P9_9CRYP9.130e-5137.74Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S4K6K6_9STRA7.530e-4736.06Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0QF75_9CRYP6.340e-4232.06Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A0L0G4C2_9EUKA7.350e-3934.02Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A2R5GKM3_9STRA2.790e-3734.44Thiol-disulfide oxidoreductase resA n=1 Tax=Hondae... [more]
A0A1Z5JP17_FISSO3.820e-3433.81Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1290contigF-serratus_M_contig1290:157599..161989 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score464.2
Seed ortholog evalue5.4e-128
Seed eggNOG ortholog2880.D7FT29
KEGG koko:K17609
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cellular oxidant detoxification
EggNOG OGsKOG2501@1,KOG2501@2759
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-04_002600.1
EC1.8.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009
Exons6
Model size1020
Cds size1014
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929232.6226392-UTR-F-serratus_M_contig1290:157598..1576041622929232.6226392-UTR-F-serratus_M_contig1290:157598..157604Fucus serratus maleUTRF-serratus_M_contig1290 157599..157604 +
1690962761.4544034-UTR-F-serratus_M_contig1290:157598..1576041690962761.4544034-UTR-F-serratus_M_contig1290:157598..157604Fucus serratus maleUTRF-serratus_M_contig1290 157599..157604 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929232.6567538-CDS-F-serratus_M_contig1290:157604..1578351622929232.6567538-CDS-F-serratus_M_contig1290:157604..157835Fucus serratus maleCDSF-serratus_M_contig1290 157605..157835 +
1690962761.4672656-CDS-F-serratus_M_contig1290:157604..1578351690962761.4672656-CDS-F-serratus_M_contig1290:157604..157835Fucus serratus maleCDSF-serratus_M_contig1290 157605..157835 +
1622929232.6729128-CDS-F-serratus_M_contig1290:158837..1589451622929232.6729128-CDS-F-serratus_M_contig1290:158837..158945Fucus serratus maleCDSF-serratus_M_contig1290 158838..158945 +
1690962761.4772341-CDS-F-serratus_M_contig1290:158837..1589451690962761.4772341-CDS-F-serratus_M_contig1290:158837..158945Fucus serratus maleCDSF-serratus_M_contig1290 158838..158945 +
1622929232.6982086-CDS-F-serratus_M_contig1290:159943..1600581622929232.6982086-CDS-F-serratus_M_contig1290:159943..160058Fucus serratus maleCDSF-serratus_M_contig1290 159944..160058 +
1690962761.491213-CDS-F-serratus_M_contig1290:159943..1600581690962761.491213-CDS-F-serratus_M_contig1290:159943..160058Fucus serratus maleCDSF-serratus_M_contig1290 159944..160058 +
1622929232.7117772-CDS-F-serratus_M_contig1290:160420..1606481622929232.7117772-CDS-F-serratus_M_contig1290:160420..160648Fucus serratus maleCDSF-serratus_M_contig1290 160421..160648 +
1690962761.5024996-CDS-F-serratus_M_contig1290:160420..1606481690962761.5024996-CDS-F-serratus_M_contig1290:160420..160648Fucus serratus maleCDSF-serratus_M_contig1290 160421..160648 +
1622929232.725536-CDS-F-serratus_M_contig1290:161167..1611951622929232.725536-CDS-F-serratus_M_contig1290:161167..161195Fucus serratus maleCDSF-serratus_M_contig1290 161168..161195 +
1690962761.5101259-CDS-F-serratus_M_contig1290:161167..1611951690962761.5101259-CDS-F-serratus_M_contig1290:161167..161195Fucus serratus maleCDSF-serratus_M_contig1290 161168..161195 +
1622929232.73884-CDS-F-serratus_M_contig1290:161685..1619891622929232.73884-CDS-F-serratus_M_contig1290:161685..161989Fucus serratus maleCDSF-serratus_M_contig1290 161686..161989 +
1690962761.5229115-CDS-F-serratus_M_contig1290:161685..1619891690962761.5229115-CDS-F-serratus_M_contig1290:161685..161989Fucus serratus maleCDSF-serratus_M_contig1290 161686..161989 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1290.2145.1prot_F-serratus_M_contig1290.2145.1Fucus serratus malepolypeptideF-serratus_M_contig1290 157605..161989 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1290.2145.1

>prot_F-serratus_M_contig1290.2145.1 ID=prot_F-serratus_M_contig1290.2145.1|Name=mRNA_F-serratus_M_contig1290.2145.1|organism=Fucus serratus male|type=polypeptide|length=338bp
MGSFLLLDATDQAITVCWEREVGVSTEAVQMKPTDEGDGAEWTTLSDSLA
TSALRKNKLLPGTSYVFRRRSRQAQVRAWGPWSEPSEPFTTLSEGVQQQP
PPAVKLREAGALVMEWSSVPAAGGYEIQMSASGGRWATIAPCFGSTLLRK
KGLDSKPYRFRIRPVFKPASDGDGQEAAEEKRWGWSPASTPASPAVLNSF
LSSSIPQQLVRRGKEVVSRDVLAGKVVAFYFSASWCGPCRKYTPQLAALY
SRAKAQHKAFEVVFLSLDSDEASMERYHAGMPWLAVPFEDPFREEFASAK
GVNSVPRLIVTGRRGQEISSNAVGMTWDQLVAWESQG*
back to top

mRNA from alignment at F-serratus_M_contig1290:157599..161989+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1290.2145.1 ID=mRNA_F-serratus_M_contig1290.2145.1|Name=mRNA_F-serratus_M_contig1290.2145.1|organism=Fucus serratus male|type=mRNA|length=4391bp|location=Sequence derived from alignment at F-serratus_M_contig1290:157599..161989+ (Fucus serratus male)
GTCCCCATGGGGTCTTTCCTGCTCCTGGATGCAACGGACCAAGCCATCAC CGTGTGCTGGGAGCGCGAGGTGGGCGTATCGACGGAGGCGGTGCAGATGA AGCCGACCGACGAAGGCGACGGCGCCGAATGGACGACCCTGTCCGACAGC CTCGCGACCAGCGCCCTTCGAAAGAACAAGCTCCTCCCCGGGACCAGTTA CGTTTTCCGTCGGCGTTCGAGGCAGGCGCAGGTACGAGTCACGCTGTCTT CGTGCGTCTTCATTTCACCCTTTGATCTATTAAAAGCATCAGCCTATAGT CTCACCCGTCGTTCACAGTAATAGTTGCGGCATTATTCTCTCGCCAGCAT GCAATATCGCGACGGTTCCCCCCCCCCCACCTTCTTTGGAATTCGAGGTC GCAAAACTCTTAACCTTGCTTGCTACCCGATCGAATTTCCCGGGGGCTCG AGACGAAGCCCCGCCCGCCCCCACCCTCCCTCTCCCAGTCCCTCGTTCTC GGCTCGTGCTGTCTCTTAACTGACACTTTGCTGATTTTACTCCCCGCTCT TGACATTCCGATCACGATCAGCCGAAGCGCGTGTTACACATCCCCGTAGA TACTAATATACTACTAATTATTACTAGGGTATGGCTATTTGCCCCACCGG TGGGCTATTCTCTTGTTTACCCCCCCACCTGGATCTCGCGTCAGAAGACT TGGTTGGTCACAGTACATGCATGTGTGTGTTAGGGTTAGGGTAAGCTATC CTGGGGTCTATCGTGCAGCCCAAACGGTCCTGTCTACGTGCTACCACGGC CGGTGGGGTGGTTGGTGTTTTCTGGTATGTATGGCTATTTGCCCTTACCT ACCAGAAAACACCAACCAGCCCACCGACCGTAACAGCACGTAGACAGGAC CGTTTGGGCTGCACGATAGACCCCATGACAGCCCTGCAACGCGCCTACAC ACTCATGCATGTACTGTGACCAACCGTGTCTTCTGACGCGAGATCCAGGT GGTGGGGTAAATTTGGAAATGGCCCACCGGTGGGGCAAATAGCCATTTCC CTATCAATACGATAACATTGTAAAAGGATAAAGGCTTCTGCAACTATGAT AGCTCCAAGTGGAACGTTCTCTATTCCACTTTTCACGGAATTTCGAGCCA AAAAAAGCACGGACGGTGTTGGTTTTTTTAATCAGCTTGCTTTGTCTTCA GTACACTTGCTCACGAGGCGTGCGCGCTCGCGTCTGCAGGCGTGGGGCCC TTGGTCTGAACCCTCTGAACCCTTCACAACGCTCTCCGAAGGCGTGCAGC AGCAACCTCCGCCAGCGGTGAAGCTTCGAGAGGCGGGTGCTTTGGTGGTG AGAGCAAAGTGCGGCGGTGGTGATGAAAGCCTCTATTCATCTGTGTCATG GTCTAGCTTCTTGTGACTTTTGAGCCGCAGGCGGTTGCGCCCACGGGGAG GGCCCGCACAAATCCCCCTCTCTTTCCCTCCTCCCCTGCTTTTTCAATGA CTCGAAACCAGTATACGGGTCGCGTGTTGCAACACACTGGCTCTGCTAGT CCTATTCGGGAGGAGTGTGTAAAGGCCGTAACCGCTGCTTTGGAAGTAAG GGAAATAGGAACCACAGCATCATTTGTGTTACAGACTATTATTAGTATAG TCGCTCCCTGGTACTCGAACCTCGCATTTCGTGAAAACTGGCAGAACACA GCCAGTAGTGACTAGTAATAGGGAGATTTTCCGTACACTCCAACGCACAC ATCACGAGCATGAGACATAGGACATTAAAACACACACACACACACACACA CAATTCCCTTTGTCGCGTATGATCAGAGGTTTTCGTAATAAGTATCATTG ATcCCCCCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGATGAC AGGGCCGGATTGCGCGGTTATGTGCAATTTAATAAATACACACACACACA CACACACGCGCACACACCTAGAACTACTTCTCCAAGTGCATTCGTGATGC AGAGAGATAGAGAGAGACAGAGACAGATACAGAGAGAGACAGATACAGAG AGAGGGAGACCGAGAGAGAGAGCTACGTGGTCGAGAGAGAAAGGTCGCAG CTTCTCCTATTTCAGTTGCATCTCCTAGCCAGAACAGAACCGGAAGATAC ACGGTGTGACCTTCACGGGCTCGAGTTGCTAATCGCTGCCAACCCCCGCC GTTATAATGTATCCGCGGCCGTTTTCTGTGGCACGTCCTGCCTCTGCCCC TCCCTGATCACTCATGCCTCCGGAACAATGGTCGGCCGCAAACAACACTT GCGGCTGATTCGCGGTGGCTTGATCGGTTGCTTCCTTTCTCCCAGATGGA GTGGTCATCGGTTCCCGCGGCGGGCGGTTACGAGATCCAGATGAGCGCGT CGGGCGGGCGGTGGGCGACGATCGCGCCCTGCTTCGGCTCGACGCTCCTG CGCAAGAAAGGTGAAAAAAGCTCTGAGTGGTACCTGGTATGCTACAAAAG AGGCGGTTACTGAGTTCTGGTTGACCGTTCATTTGCATGCGGGTGACGGA GGGAAGGAAGCGTTCCGATTGGGAAGGTGGGGAGCAGAGGGATATGGGGA ACCTATTTCCTTCCGTTTCCCCCTCGGGAGGCTGGAAGGACATCAGGCAT ATGGTGTGTGAATGGTTTGTGAATGTGCCATCAGGGAGAGTAAAACTTTC AATTTTTTATAAGTGAACCCATCATCTCATAAAGCGATGTTCGCTCTCTG GCGTGACATGTCGTGACCGCCACCGCGGCAACGCCGGACGGGGAACGGAC GGGACTGAACGGAACGGCTCAGGGTTGGATTCGAAGCCCTATCGCTTCCG CATCCGTCCCGTGTTCAAACCTGCGAGCGACGGTGATGGACAAGAAGCGG CGGAGGAAAAGCGGTGGGGGTGGTCCCCTGCGTCGACACCCGCCTCGCCG GCTGTGTTGAACTCCTTCCTGAGCTCAAGCATTCCGCAGCAGCTTGTCCG TAGGGGGAAGGAGGTCGTGAGCAGGGATGTTCTGGCGGGGAAAGTCGTAG GTGAGCGTCGCGTAAACGCGCTTTTTTATATATCCTCTCCATAATGCCAT GGCAACGAGCTCATCTTATGAGTTGTGTCAAGGAGCACATGTAAGAGTAT TCCTTCCTGGGTATCGCGTGATGTACTGTACACGAGGTACGGTAGGCATT TCGCTCGATCCCGCCTAGCGTCCATTTCTTCCTCTGTGAGTGATTCGGGG CGTACTTGATCCGTTGTTTTTGTATTCGCACTTATTGCTTTGTTTTTTCT ATCCGACGTCTCTCCTTCGAGACATGCTTGACTACACTCCACGCAGTATG GTACGGTGGAACTGCTCTCCCCATTCTGTTGCCAAGACTAACACCCTTTT GCTCCCGTTAAGCCCGAAAAAGCTTTTGTACCAACTTCTCTCATGAGACA CAGCTTGCTTCTGTTTGGTGTAGCAATCGCGATCGAAGTATTGGCTCACT TGTGATAACACCCTCTCCGCCTTCTTTCGGGACGTTTTCCGCCGGAACCG CTGAACGGCACGCTGGCAGCATTCTACTTTTCGGCGTCGTGGTGCGGGTG AGCAAAAACTTCTTCGCACCAAGTAGGCGTTATTTTTCTGGCCCGTGACA GCGGGGATACATTGGCTTCATACCTCGCTGGAATGTTGATTTTATACGTA GCTTGGAAAACGTGTTAACAAAGGTTACTAAACGCTTACGGTTGCATTTG ACGAAACAGGGAGAGAAGGCACCAGTCGTGTCTCTTTCAATTGTTCGCTG GGCTCGGGGAGCTTCGCGGCGCGAGGACGTCCGCGCTACATTTTATGATC ACAAAACCGCCCGGTGCCTGGAGTAGTACAGCTTCGAATGGTAGTCTCGG AACAACGAATGTCTCTTAAAACCCCTTACTCAATATATGTAAATACTTAT TTCCCCTTCTCCCCTCCCCTCGTTGCTACTAATACTGCCAAATCACTCAT TCGACGTCATGGATCGGCTCGGTATTCTCCAATTTTGCGTATACTAATCA AAAACCTACACGAAAACTCGACCACGAACAAGCCCAGGCCGTGCCGCAAG TACACCCCTCAGCTCGCTGCGCTCTACAGCAGGGCGAAGGCGCAACACAA GGCGTTCGAGGTGGTGTTCCTCAGCCTCGACTCCGACGAGGCGTCCATGG AGAGGTACCACGCGGGCATGCCGTGGCTCGCGGTGCCGTTCGAAGATCCC TTTCGGGAAGAGTTCGCGTCGGCCAAGGGCGTCAACTCCGTCCCGCGGCT GATCGTCACGGGCCGCCGCGGTCAAGAGATCTCCAGCAACGCCGTCGGGA TGACGTGGGATCAGCTCGTTGCGTGGGAAAGTCAGGGGTAA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1290:157599..161989+

>mRNA_F-serratus_M_contig1290.2145.1 ID=mRNA_F-serratus_M_contig1290.2145.1|Name=mRNA_F-serratus_M_contig1290.2145.1|organism=Fucus serratus male|type=CDS|length=2028bp|location=Sequence derived from alignment at F-serratus_M_contig1290:157599..161989+ (Fucus serratus male)
ATGGGGTCTTTCCTGCTCCTGGATGCAACGGACCAAGCCATCACCGTGTG
CTGGGAGCGCGAGGTGGGCGTATCGACGGAGGCGGTGCAGATGAAGCCGA
CCGACGAAGGCGACGGCGCCGAATGGACGACCCTGTCCGACAGCCTCGCG
ACCAGCGCCCTTCGAAAGAACAAGCTCCTCCCCGGGACCAGTTACGTTTT
CCGTCGGCGTTCGAGGCAGGCGCAGGTACGAATGGGGTCTTTCCTGCTCC
TGGATGCAACGGACCAAGCCATCACCGTGTGCTGGGAGCGCGAGGTGGGC
GTATCGACGGAGGCGGTGCAGATGAAGCCGACCGACGAAGGCGACGGCGC
CGAATGGACGACCCTGTCCGACAGCCTCGCGACCAGCGCCCTTCGAAAGA
ACAAGCTCCTCCCCGGGACCAGTTACGTTTTCCGTCGGCGTTCGAGGCAG
GCGCAGGTACGAGCGTGGGGCCCTTGGTCTGAACCCTCTGAACCCTTCAC
AACGCTCTCCGAAGGCGTGCAGCAGCAACCTCCGCCAGCGGTGAAGCTTC
GAGAGGCGGGTGCTTTGGTGGCGTGGGGCCCTTGGTCTGAACCCTCTGAA
CCCTTCACAACGCTCTCCGAAGGCGTGCAGCAGCAACCTCCGCCAGCGGT
GAAGCTTCGAGAGGCGGGTGCTTTGGTGATGGAGTGGTCATCGGTTCCCG
CGGCGGGCGGTTACGAGATCCAGATGAGCGCGTCGGGCGGGCGGTGGGCG
ACGATCGCGCCCTGCTTCGGCTCGACGCTCCTGCGCAAGAAAGATGGAGT
GGTCATCGGTTCCCGCGGCGGGCGGTTACGAGATCCAGATGAGCGCGTCG
GGCGGGCGGTGGGCGACGATCGCGCCCTGCTTCGGCTCGACGCTCCTGCG
CAAGAAAGGGTTGGATTCGAAGCCCTATCGCTTCCGCATCCGTCCCGTGT
TCAAACCTGCGAGCGACGGTGATGGACAAGAAGCGGCGGAGGAAAAGCGG
TGGGGGTGGTCCCCTGCGTCGACACCCGCCTCGCCGGCTGTGTTGAACTC
CTTCCTGAGCTCAAGCATTCCGCAGCAGCTTGTCCGTAGGGGGAAGGAGG
TCGTGAGCAGGGATGTTCTGGCGGGGAAAGTCGTAGGGTTGGATTCGAAG
CCCTATCGCTTCCGCATCCGTCCCGTGTTCAAACCTGCGAGCGACGGTGA
TGGACAAGAAGCGGCGGAGGAAAAGCGGTGGGGGTGGTCCCCTGCGTCGA
CACCCGCCTCGCCGGCTGTGTTGAACTCCTTCCTGAGCTCAAGCATTCCG
CAGCAGCTTGTCCGTAGGGGGAAGGAGGTCGTGAGCAGGGATGTTCTGGC
GGGGAAAGTCGTAGCATTCTACTTTTCGGCGTCGTGGTGCGGCATTCTAC
TTTTCGGCGTCGTGGTGCGGGCCGTGCCGCAAGTACACCCCTCAGCTCGC
TGCGCTCTACAGCAGGGCGAAGGCGCAACACAAGGCGTTCGAGGTGGTGT
TCCTCAGCCTCGACTCCGACGAGGCGTCCATGGAGAGGTACCACGCGGGC
ATGCCGTGGCTCGCGGTGCCGTTCGAAGATCCCTTTCGGGAAGAGTTCGC
GTCGGCCAAGGGCGTCAACTCCGTCCCGCGGCTGATCGTCACGGGCCGCC
GCGGTCAAGAGATCTCCAGCAACGCCGTCGGGATGACGTGGGATCAGCTC
GTTGCGTGGGAAAGTCAGGGGTAAGCCGTGCCGCAAGTACACCCCTCAGC
TCGCTGCGCTCTACAGCAGGGCGAAGGCGCAACACAAGGCGTTCGAGGTG
GTGTTCCTCAGCCTCGACTCCGACGAGGCGTCCATGGAGAGGTACCACGC
GGGCATGCCGTGGCTCGCGGTGCCGTTCGAAGATCCCTTTCGGGAAGAGT
TCGCGTCGGCCAAGGGCGTCAACTCCGTCCCGCGGCTGATCGTCACGGGC
CGCCGCGGTCAAGAGATCTCCAGCAACGCCGTCGGGATGACGTGGGATCA
GCTCGTTGCGTGGGAAAGTCAGGGGTAA
back to top