mRNA_F-serratus_M_contig1288.2132.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1288.2132.1 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE) HSP 1 Score: 583 bits (1502), Expect = 2.670e-179 Identity = 661/1470 (44.97%), Postives = 755/1470 (51.36%), Query Frame = 3
Query: 510 MTTNGSELFLDRATRVRKIQQIAQFLASIENKDPQDRNLHNLAQKFENQIFSAAMNVEDYNNRIHKKLTKVQKVRQQQ--------------AAAVQ-AKQGTQPLDQNRLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQGLPIQTSTATSGVSTPGAXXXXXXXXXXVTAAWPNQAYTPPDSTINNVPGISSVGGRGSRGP-----------SGAYEGQAGNALVSNASQMGQGVDAAAQAAANVVASAAMGIPRQAAPLGPGSRGIGRNVSSGMVMPTGH-----------GSGSTQSQVDA---EDRAKQHRSLRAEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCHDTGHVPSAASLHSLEHTLIRVHKASNALQVVMIRDHSRTQQNNNPYGPGXXXXXXXXXXXXRLFPPMLVSSRQMSRQFG--DPGYSPAHSGMPQASPTLSLLQQQGSGVVSPVNS----LSTSLDPHDSG-LDLEPIPLPDNAAFGSPTPTTPHTQQHQHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPXXXXXXXXXXXXQIQRQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATATAEKSSDAFWSSVDIGGLEPNPLDVTPLDDGLTANLDAGDADLDMPVEDLLAFDXXXXXXXXXXXXGDDWLSTQNLPDEC------SPRFGQQSVSESTSGTVGGATTRPGAFVP-------SSQG--SVSSTAQQA------------------------------------------------------------------------------GAIAAAATTQQLQSMQHIQXXXXXXXXXXXXLHQQ-----------------------------------QIKNPAADTSHSDPSMLRDVIFHQLGPVPRLLDGLVSGCS------SVASASPTSAGAPGAVLSR----------------LGNKRAQEDCPDGNE-RPQKKMNLSGRDTAADRDVTLGGAGAGGQPGSTSVTTTIKSEAGGSNTDLSAVGSQTTXXXXXXXXXXXXXXXXXXTSNLLARPAGADFRHEGGEELMAVLRAKVGRLFTLDAEYTHVRRGKREGDKVTVNGGIDVGMTAADGSK-------------------------AAGLRRVLSRLKAVRTGQFVVNVKFDVTG-NECRPCDVSVLSWAEADEAHTSKSDGSGIQAESDPWSEQNFLQAMEGTKPWRTSNHAVFSRVSSHAFKALHDFVDKRQDGNMSEALVSFFQWMSKYDRLFQDPCKIANKLVTQDSGTGEPLPPTLRTTDGQAIMPESLAGMPQREPQQPTFATTVGSASATAAQT 4247
M NGSELFLDR TRVRKIQQIA FLA IE KDPQDR+LH LAQKFENQIF+AAMNVEDYN RI+KKL+KV+ + Q AA++Q Q LD RL QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX GAY+G G A + GQGVDAAAQAAANVVASAAMG PRQ + +G + +G VS+GMVM TGH GSG++ Q +A E+RAKQHRS RAEELR IYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCH+TGHVPSAASL SLEHTLIRVHKASNALQV MIRDHS+TQ YG XXXX +Q SRQ+ +SP Q++ TL L GVV+PV S L+ S+D DS L L+ IPLPD G TP QQ XXXXXX Q+Q Q XXXXXXXXXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX A E S+D FW SVDIG LEP PL D + NL+ G D DMPVED L D GDDWLSTQ LP+ SPR G S+ S G GGA+TRPGA+VP S G +VSS QQ G+ AAAA + + Q + Q + AAD + +P++L +VI HQLGP+PRLL+GLVSGC+ SVA+ P +G+ G+ ++ L NKR +++C DG++ RP+KK+ L XXXXXXXXXXXXXXXXXX NLLARPA ADFRH GGEELMA+LRAKVGRLF+L AEYTHVR G G+ + G +VG DG GLRRVLSR+KAVR G FVV++ FDV G NECRPCDVSVLSW EA E ++ + G+ + + + F+ + G+KPWR S H F RVS HAF+ALH FV+KR DGN+ EAL SF WM+ YDR+FQDPC IANKLV DSGTGEPLPPTLRT+DG A++ ESLAG PQREPQ P + T +A+ T T
Sbjct: 1 MAANGSELFLDRNTRVRKIQQIATFLAQIEGKDPQDRSLHGLAQKFENQIFTAAMNVEDYNTRINKKLSKVRHQQAMQXXXXXXXXXXXXXXAASLQDPSQQLDSLDHQRLQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGAYQGSGGQPWALGAGRGGQGVDAAAQAAANVVASAAMGFPRQNS-IGSSTGMVG--VSAGMVMSTGHTGGGGVGAVGGGSGTSTGQHEAALKEERAKQHRSRRAEELRTIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCHETGHVPSAASLQSLEHTLIRVHKASNALQV-MIRDHSKTQ-----YG-------GCGXXXXXXXXXXXXXXQQPSRQYSADQNAFSPG-----QSNSTLGPLGGTAGGVVTPVCSVGPTLTGSIDGGDSAALSLDAIPLPDTGT-GYRTP-----QQ----------------------------------------------------XXXXXXNFLRQTQQQVGTARRQRAHQLQLQXXXXXXXXXXXXXXXXXXXXXXXXXLQQQQLXXQQNXXXXXXXXXXXXXXXXXXXXXXXMPFRQXXXXXXXXXXXXXXXASASSGALPDARLLL-AQGESSNDMFWGSVDIGDLEPTPLSGPLEDQVIPPNLEEG-GDFDMPVEDFLDLDPFPLEGMPLD--GDDWLSTQCLPEGSGNKPGGSPRAGNNSMDSSAVGGCGGASTRPGAYVPPPGALGDSGAGGLAVSSGLQQQQQQGLPQLQTQLSVGGLTPLGNGASGVAPINPADPIPEPLPQTVVDRLAAVVAGGGTAASNLGRLAGSVSAQLGFRAPGSTAAAADSSRSYLGGAAQDPDLLAAEASLGMGQSGRASGXXXXXXCGALTASGLRSAGQTLCRQANSAFEAMATAADVNKGNPALLHNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVPPARSGSRGSGAAQDGTAXXXXXXXXXXXALSNKRTKDECGDGDDGRPEKKIALGXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMALLRAKVGRLFSLSAEYTHVRTGGMSGNGSSAALGGEVGKKQEDGLTXXXXXXXXXXXXXXXTAGDVKPDVGGGGLRRVLSRVKAVRAGHFVVHINFDVAGSNECRPCDVSVLSWNEAQEGESASAGGADARVKVEGG---GFMDTVHGSKPWRASQHTAFVRVSGHAFQALHGFVNKRTDGNVGEALASFLTWMANYDRVFQDPCTIANKLVATDSGTGEPLPPTLRTSDGSALLAESLAGTPQREPQSPASSQTASTAAGTGVAT 1375
BLAST of mRNA_F-serratus_M_contig1288.2132.1 vs. uniprot
Match: D7FX92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX92_ECTSI) HSP 1 Score: 362 bits (929), Expect = 2.790e-106 Identity = 272/616 (44.16%), Postives = 331/616 (53.73%), Query Frame = 3
Query: 2544 EKSSDAFWSSVDIGGLEPNPLDVTPLDDGLTANLDAGDADLDMPVEDLLAFDXXXXXXXXXXXXGDDWLSTQNLPDEC------SPRFGQQSVSESTSGTVGGATTRPGAFVPSSQGSVSSTAQQAGAIAAAATTQQLQSMQHIQXXXXXXXXXXXXLHQQQIK--NPAADTSHSDPSMLRDVIFHQLGPVPRLLDGLVSGCSSVASASPTSAGAPGAVLSRLG-----------------------NKRAQEDCPDGNE-RPQKKMNLSGRDTAADRDVTLGGAGAGGQPGSTSVTTTIKSEAGGSNTDLSAVGSQTTXXXXXXXXXXXXXXXXXXTSNLLARPAGADFRHEGGEELMAVLRAKVGRLFTLDAEYTHVRRG--KREGDKVTVNGGI-----DVGMT-------------------AADGSK---AAGLRRVLSRLKAVRTGQFVVNVKFDVTG-NECRPCDVSVLSWAEADEAHTSKSDGSG--IQAESDPWSEQNFLQAMEGTKPWRTSNHAVFSRVSSHAFKALHDFVDKRQDGNMSEALVSFFQWMSKYDRLFQDPCKIANKLVTQDSGTGEPLPPTLRTTDGQAIMPESLAGMPQREPQQP 4199
E S+D FW SVDIG LEP PL + D + NL+ G D DMPVED L D GDDWLSTQ+LP+ SPR G S+ S G GGA+TRPGA+VP G++ ++ A+++ QQ Q + +Q + NPA +P++L++VI HQLGP+PRLL+GLVSGC+ V A P+ A P NKR +++C DG++ RP XXXXXXXXXXXXXXXXXX NLLARPA ADFRH GGEELMA L+AKVGRLF+L AEYTHVR G G + GG + G+T A D GLRRVL+R+KAVR G FVV++KFDV G NECRPCDVSVLSW EA E ++ + G+ ++ E S F+ + G+KPWRTS H F RVS HAF+ALH +V+KR DGN+ EALVSF WM+ YDR+FQDPC IANKLV DSGTGEPLPPTLRT DG A++ ESLAG PQREPQ P
Sbjct: 4 ESSNDMFWGSVDIGDLEPTPLSGSLEDQVIPPNLEEG-GDFDMPVEDFLDLDPFPLEGMPLE--GDDWLSTQSLPEGSGNKPGGSPRAGNVSMDSSAVGGSGGASTRPGAYVPP-PGALGASGAGGLAVSSGLQQQQQQGLPQLQTQLSVGGLTPLGNGASGVAPINPADPIPEGNPALLQNVINHQLGPMPRLLNGLVSGCTVVVPA-PSVAAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKRTKDECGDGDDGRPXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMARLKAKVGRLFSLSAEYTHVRTGVVPENGSPAALGGGEVGKKQEAGLTNXXXXXXXXXXXXXXXXXXAGDVKSDVGGGGLRRVLARVKAVRAGHFVVHIKFDVAGSNECRPCDVSVLSWNEAQEGESASTGGADARVKVEGGGQSGGGFMDTVHGSKPWRTSQHTAFVRVSGHAFQALHGYVNKRTDGNVGEALVSFLTWMANYDRVFQDPCTIANKLVATDSGTGEPLPPTLRTPDGSALLAESLAGTPQREPQSP 605
BLAST of mRNA_F-serratus_M_contig1288.2132.1 vs. uniprot
Match: A0A835Z449_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z449_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.310e-14 Identity = 85/206 (41.26%), Postives = 108/206 (52.43%), Query Frame = 3
Query: 1374 AEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQ------NSEQVLKLVQYVKEGHNALLYINRCHDTGHVPSAASLHSLEHTLIRVHKASNALQVVMIRDHSRTQQNNNPYGPGXXXXXXXXXXXXRLFPPMLVSSRQMSRQFGDPGYSPAHSGMPQASPTLSLLQQQGSGVVSPVNSLSTSLDPHDSGLDLEPIPLPDNAAFGS 1973
AE+LR Y+ DI FVQ G S+L K H P S ++Q+ KL QYV+EG NAL+Y+ RCH GHVPSA SL SLE TL +VH AS L+ +M+ XXXXXXXXXXXXR + + ++Q R + + G + SG+ G+ L+ LDP DLEPIPLPD GS
Sbjct: 447 AEQLRRRYEADIRAFVQQGRSVLLK-HDGSPRSMAAHGSGGADQIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAQQLSLDAQQQQRLYANGGAGSSSSGI--------------GGISGGCGDLA--LDPAID--DLEPIPLPDAYCNGS 633
BLAST of mRNA_F-serratus_M_contig1288.2132.1 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 8.990e-7 Identity = 54/179 (30.17%), Postives = 74/179 (41.34%), Query Frame = 3
Query: 3762 RPCDVSVLSWAEADEAHTSKSDGSGIQAESDPWSEQ---NFLQAMEGTKPWRTSNHAVFSRVSSHAFKALHDFV-DKRQDGNMSE---------ALVSFFQWMSKYDRLFQDPCKIANKLVTQDSGTGEPL------PPTLRTTDGQAIMPESLAGMPQREPQQPTFATTVGSASATAA 4241
RPCDVS+++ EA + ++DG + M G W TS H +S S+HAF+ L V + +DG ALV FF+W+ Y LF D C +++KL+ +G PPT RT DG QP FA +A A AA
Sbjct: 773 RPCDVSIIALEEAPPP-SPRTDGEXXXXXXXXXXXXXXXSIAALMRGASLWPTSAHDAYSASSAHAFQVLRSMVKEDERDGXXXXXXXXXAAHGALVRFFRWLMTYRGLFHDACAVSDKLLAFTPCSGXXXXXXXXXPPTARTLDG-----------------QPRFAHVADAAEAEAA 933 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1288.2132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1288.2132.1 >prot_F-serratus_M_contig1288.2132.1 ID=prot_F-serratus_M_contig1288.2132.1|Name=mRNA_F-serratus_M_contig1288.2132.1|organism=Fucus serratus male|type=polypeptide|length=1247bp MTTNGSELFLDRATRVRKIQQIAQFLASIENKDPQDRNLHNLAQKFENQIback to top mRNA from alignment at F-serratus_M_contig1288:212501..230343+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1288.2132.1 ID=mRNA_F-serratus_M_contig1288.2132.1|Name=mRNA_F-serratus_M_contig1288.2132.1|organism=Fucus serratus male|type=mRNA|length=17843bp|location=Sequence derived from alignment at F-serratus_M_contig1288:212501..230343+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1288:212501..230343+ >mRNA_F-serratus_M_contig1288.2132.1 ID=mRNA_F-serratus_M_contig1288.2132.1|Name=mRNA_F-serratus_M_contig1288.2132.1|organism=Fucus serratus male|type=CDS|length=7482bp|location=Sequence derived from alignment at F-serratus_M_contig1288:212501..230343+ (Fucus serratus male)back to top |