mRNA_F-serratus_M_contig999.21263.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.090e-40 Identity = 85/171 (49.71%), Postives = 109/171 (63.74%), Query Frame = 1 Query: 7 CDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVR----NSITRAARPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQ------NANKKHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFA 489 CD+IGLQETRR+GQ A + GY++ SG R G D K+G GVG A++ +S+ R E IS RL+KV L++ GR VTFVV YAPT+ + N K +FWT+LD + EV + L VLM+ANARTGRR G D+KI+GAYGRD +N+NGE LL A Sbjct: 12 CDVIGLQETRRAGQGAITHDGYVIIWSGARAGTKD-KRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLA 177
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE) HSP 1 Score: 148 bits (374), Expect = 2.810e-40 Identity = 85/174 (48.85%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 4 GCDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRN----SITRAARPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQNA------NKKHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFANN 495 GCD+IGLQETRR GQ + + GY++ SG R G D K+G GVG A++ S+ R E I RL+KV L + GR +TFVV YAPT+ N K +FWT+LD V+ EV H+ L VLM+ANARTGRR G D+KI+G YGRD +N+NGE LL A+N Sbjct: 181 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRI-GRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDGCC---DAKIMGVYGRDIMNNNGERLLGLASN 349
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5JMM5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM5_9PHAE) HSP 1 Score: 142 bits (358), Expect = 2.270e-39 Identity = 83/173 (47.98%), Postives = 109/173 (63.01%), Query Frame = 1 Query: 7 CDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRN----SITRAARPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQ------NANKKHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFANN 495 CD+IGLQETRR GQ + + GY++ SG R G D K+G GVG A++ S+ R E IS RL+KV L++ GR VTFVV YAPT+ + N K +FWT+LD + EV + L VLM+ANARTGRR +VG D K++GAYGRD + +NGE LL A++ Sbjct: 12 CDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGRAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRR---RVGCCDGKMMGAYGRDIMTNNGERLLGLASD 179
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE) HSP 1 Score: 145 bits (366), Expect = 3.260e-39 Identity = 84/174 (48.28%), Postives = 109/174 (62.64%), Query Frame = 1 Query: 4 GCDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRN----SITRAARPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQ------NANKKHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFANN 495 GCD+IGLQETRR GQ + + GY++ SG R G D K+G GVG A++ S+ R E IS RL+KV L++ GR VTFVV YAPT+ + N K +FWT+LD + EV + L VLM+ANARTGRR G D+K+LGAYGRD +N+NGE L A++ Sbjct: 11 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGGCC---DAKVLGAYGRDIMNNNGERLFGLASD 179
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5KTK0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK0_9PHAE) HSP 1 Score: 147 bits (371), Expect = 5.300e-39 Identity = 85/174 (48.85%), Postives = 110/174 (63.22%), Query Frame = 1 Query: 4 GCDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRN----SITRAARPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQNANK------KHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFANN 495 GCD+IGLQETRR GQ + + GY++ SG R G D K+G GVG A++ S+ R E IS RL+KV L++ GR VTFVV YAPT+ N K +FWT+LD V+ EV H+ L V M+ANARTGR+ G D+KI+GAYG DT+N+NGE LL A++ Sbjct: 11 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTNAGGDVHAKESFWTALDAVMREVHSHDHLVVPMDANARTGRKRDGCC---DAKIMGAYGHDTMNNNGERLLGLASD 179
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE) HSP 1 Score: 148 bits (374), Expect = 1.040e-38 Identity = 85/174 (48.85%), Postives = 112/174 (64.37%), Query Frame = 1 Query: 4 GCDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRN----SITRAARPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQ------NANKKHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFANN 495 GCD+IGLQETRR+GQ + + GY++ SG R G D K+G GVG A++ S+ R E IS RL+KV L++ GR VTF+V YAPT+ + N K +FWT+LD + EV + L VLM+ANARTGRR KG D+KI+GAYGRD +N+NGE LL A++ Sbjct: 208 GCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCC---DAKIMGAYGRDIMNNNGERLLGLASD 376
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE) HSP 1 Score: 143 bits (361), Expect = 2.460e-38 Identity = 84/173 (48.55%), Postives = 109/173 (63.01%), Query Frame = 1 Query: 4 GCDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRN----SITRAARPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQ------NANKKHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFAN 492 GCD+IGLQETRR GQ + + GY++ SG R G D K+G GVG A++ S+ R E I+ RL+KV L++ GR VTFVV YAPT+ + N K +FWT+LD + EV + L VLM+ANARTGRR G D+KI+GAYGRD +N+NGE LL A+ Sbjct: 11 GCDVIGLQETRREGQGSLAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLAS 178
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE) HSP 1 Score: 142 bits (357), Expect = 2.750e-38 Identity = 84/174 (48.28%), Postives = 109/174 (62.64%), Query Frame = 1 Query: 4 GCDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRNSITRAA----RPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQNA------NKKHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFANN 495 GCD+IGLQETRR GQ + + GY++ SG R G D K+G GVG A++ +I + R E IS RL+KV L++ GR VTFVV YAPT+ + N K +FWT+LD + EV + L VLM ANARTGRR G D+KI+GA GRD +N+NGE LL A++ Sbjct: 42 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRRRDGCC---DAKIMGANGRDIMNNNGERLLELASD 210
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE) HSP 1 Score: 147 bits (371), Expect = 3.990e-38 Identity = 85/174 (48.85%), Postives = 111/174 (63.79%), Query Frame = 1 Query: 4 GCDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRN----SITRAARPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQ------NANKKHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFANN 495 GCD+IGLQETRR+GQ + + GY++ SG R G D K+G GVG A++ S+ R E IS RL+KV L++ GR VTFVV YAPT+ + N K +FWT+LD + EV + L VLM+ANARTGRR G D+KI+GAYGRD +N+NGE LL A++ Sbjct: 119 GCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLASD 287
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Match: A0A6H5KQ63_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ63_9PHAE) HSP 1 Score: 143 bits (360), Expect = 7.770e-38 Identity = 85/174 (48.85%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 4 GCDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRN----SITRAARPPEFISDRLLKVTLELRGRAKAVTFVVAYAPTKPQ------NANKKHAFWTSLDIVVEEVPKHEQLFVLMEANARTGRREKGQVGSKDSKILGAYGRDTLNDNGELLLSFANN 495 GCD+IGLQETRR GQ + + GY+ SG R G GK G GVG A++ S+ R E IS RL+KV L++ GR VTFVV YAPT+ + N K +FWT+LD + EV + L VLM+ANARTGRR G D+KI+GAYGRD +N+NGE LL A++ Sbjct: 11 GCDVIGLQETRREGQGSIAHDGYVFIWSGARAGTK-GKWGVHGVGIAIKEAMWQSVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCC---DAKIMGAYGRDIMNNNGERLLGLASD 179 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig999.21263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig999.21263.1 >prot_F-serratus_M_contig999.21263.1 ID=prot_F-serratus_M_contig999.21263.1|Name=mRNA_F-serratus_M_contig999.21263.1|organism=Fucus serratus male|type=polypeptide|length=174bp LGCDIIGLQETRRSGQSAFSQAGYLVYCSGERGGENDGKKGQGGVGCAVRback to top mRNA from alignment at F-serratus_M_contig999:160584..161105- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig999.21263.1 ID=mRNA_F-serratus_M_contig999.21263.1|Name=mRNA_F-serratus_M_contig999.21263.1|organism=Fucus serratus male|type=mRNA|length=522bp|location=Sequence derived from alignment at F-serratus_M_contig999:160584..161105- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig999:160584..161105- >mRNA_F-serratus_M_contig999.21263.1 ID=mRNA_F-serratus_M_contig999.21263.1|Name=mRNA_F-serratus_M_contig999.21263.1|organism=Fucus serratus male|type=CDS|length=1044bp|location=Sequence derived from alignment at F-serratus_M_contig999:160584..161105- (Fucus serratus male)back to top |