mRNA_F-serratus_M_contig1286.2119.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1286.2119.1
Unique NamemRNA_F-serratus_M_contig1286.2119.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: D7G104_ECTSI (Alpha-1,2-fucosyltransferase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G104_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 6.950e-123
Identity = 185/285 (64.91%), Postives = 220/285 (77.19%), Query Frame = 3
Query:  555 RGPGLVELTFMGRLGNNLFEYATARVVADKLGWALSLK-ALLNKERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDR----PETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVDDDPRYIYRDANGLVVRP 1394
            RGPG+V L FMGRLGNNLFEYA AR +AD+LG+ALS++ A  N+++F  L +PEG ACFPGVRP+GP  SS EM  LE V+FRG++RE+ DPTPR I M+ WFQ+Y +F SEKDRLR+I+ALDPSCCGPTAPGP D+VIH+RNY+AEL  EQYEKL F+DLD+ FY+ VL+   +     PETVWVVGEF+   PL KRLQ++H NVK AEMV DQF AFCFLSRAPR +MA STFSWW AFLG  TEVHFP     + VTG  I VD+  RY+YRD  G VV P
Sbjct:   95 RGPGIVRLNFMGRLGNNLFEYAAARALADRLGFALSIQPAPYNRKKFGLLTRPEGMACFPGVRPVGPARSSPEMVGLETVKFRGVRRELGDPTPRSIEMEGWFQDYSMFKSEKDRLRKIMALDPSCCGPTAPGPGDLVIHHRNYRAELTAEQYEKLIFKDLDYEFYEAVLRDAAESAAGPPETVWVVGEFNDEEPLFKRLQQDHPNVKRAEMVEDQFHAFCFLSRAPRLVMAHSTFSWWVAFLGVGTEVHFPLTRQNQGVTGPSIAVDEG-RYVYRDEAGRVVPP 378          
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: D7G107_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G107_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 4.780e-89
Identity = 137/212 (64.62%), Postives = 161/212 (75.94%), Query Frame = 3
Query:  771 MAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDR----PETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVDDDPRYIYRDANGLVVRP 1394
            M  LE V+FRG+++E+ DPTPR I M+ WFQ+Y +F SEKDRLR+I+ALDPSCCGPTAPGP D+VIH+RNY+AEL  EQYEKL F+DLD+ FY+ VL+   +     PETVWVVGEF+   PL KRLQ++H NVK AEMV DQF AFCFLSRAPR +MA STFSWW AFLG  TEVHFP     K VTG  I VD+  RY+YRD  G VV P
Sbjct:    1 MVGLETVKFRGVRQELGDPTPRSIEMEGWFQDYSMFKSEKDRLRKIMALDPSCCGPTAPGPGDLVIHHRNYRAELTAEQYEKLIFKDLDYEFYEAVLRDAAESAAGPPETVWVVGEFNDEEPLFKRLQQDHPNVKRAEMVEDQFHAFCFLSRAPRLVMAHSTFSWWVAFLGVGTEVHFPLTKQNKGVTGPSIAVDEG-RYVYRDEAGRVVPP 211          
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: F2TVY1_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TVY1_SALR5)

HSP 1 Score: 116 bits (291), Expect = 8.250e-24
Identity = 84/285 (29.47%), Postives = 142/285 (49.82%), Query Frame = 3
Query:  564 GLVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERF-KTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDW-FQEYRVFASEKDRLRQI-LALDPSCCGPTA-----PGPNDMVIHYRNYKA-ELDKEQYEKLH-FQDLDFNFYDTVLKSTQDRP--ETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRA---FCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVD-DDPRYIYRD 1370
            G+V +   G+ GN L EY  AR+VA+   W L +  +  +E F K L+ P     F    P+            +          + DPTPR I +  + F+ Y + A  K  ++   L +D SC    +     PGP D+V+H R Y   E ++ +Y+    F DL +++YD +L+  Q +   +TVW+     +++P+ ++L  ++G   I    +  + +   + F+  A R +M+QST++WWAA+LG+A EVH+P          RH +   D+PRY++ D
Sbjct:  229 GVVLMHCHGQFGNRLGEYTIARIVAETRRWPLVMCDVFKQELFSKGLIFP-----FAVDHPIDLAAFDQLPVDTQAGHNYDFDELLRDPTPRVIDLAGFPFRNYSILAQHKAAIKDDWLRIDTSCLAAQSLPLSLPGPRDIVVHLRAYHGCEGEEHEYDPTEAFVDLPWDYYDRILQRYQRKGGWDTVWLASRCGEHHPIAQQLMTKYGARVIQGDGSKNWASMHDWLFMRSARRLVMSQSTYAWWAAWLGDAEEVHYPLAGDWWGKGPRHTLYPVDEPRYVFHD 508          
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A349D2R7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Peribacteria bacterium TaxID=2053688 RepID=A0A349D2R7_9BACT)

HSP 1 Score: 105 bits (262), Expect = 2.110e-21
Identity = 80/268 (29.85%), Postives = 132/268 (49.25%), Query Frame = 3
Query:  567 LVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIV--VDDDPRYIY 1364
            ++E+ + G LGN LF+Y  ARV+A +LG+AL  K +       T  + +GK  FPG         +  + +  +V    +   +AD   RKI ++  FQ Y  + S ++++R  +   P+C     P P  +V+H R       +  Y ++    L F+FY  VLK   D    V    +    +P  ++ +     +K  +++ D    FCFL  A +  ++QST+SWWAA+L +ATE++FP   T    + R  +    D+PRY Y
Sbjct:    1 MIEVHYSGGLGNVLFQYCFARVLAGQLGYALEAKPVPGFPH--TADRIDGKR-FPG--------GAIVVLEGHKVDLPAI---LADTRDRKIIVKGCFQRYEYYHSFREQIRTWM--QPACSAAAKPDPRALVMHVR-------RGDYLRVEGYPLPFSFYKDVLKRA-DFDHLVICTDD--PRDPFFRKFRHHDPEIKSGDLLED----FCFLKSAKKIALSQSTYSWWAAYLSDATEIYFPRSLTGPFSSSRPDIDLEVDEPRYRY 238          
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A2H0RNU4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Peregrinibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_55_24 TaxID=1974791 RepID=A0A2H0RNU4_9BACT)

HSP 1 Score: 97.1 bits (240), Expect = 1.390e-18
Identity = 74/283 (26.15%), Postives = 126/283 (44.52%), Query Frame = 3
Query:  567 LVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLN----KERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVG-------EFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFP------FQPTRKAVTGRHIVVDDDPRYIY 1364
            ++E+ ++G++GN LF+Y   R++A++LG+AL  + L      ++R      P+G               S  +  L  +        +AD  PR I ++  FQ Y  +   +D +R  L   P+C G  A   ND+V+  R       ++ Y +     L F++Y+ VL   Q     +   G        F ++NP+++R                    FC +  A +  ++QS+FSWWAAFL +A  ++FP      F P R  +     +  D+PRY+Y
Sbjct:    1 MIEVHYLGKIGNFLFQYCFGRLLAEQLGYALRAEPLPGFPGTQQRIDGQSYPDGDTLV----------LSGNVVDLPAL--------LADTRPRHIILKGAFQRYEYYRPHRDAIRTWL--QPACTGMPAASANDLVMQVR-------RDDYLRAVGYPLPFSYYEQVLTQAQYDRLVICTDGPTDPFLRRFRRFNPVIER--------------RGVMEDFCLMHSARQIAISQSSFSWWAAFLSHAETIYFPRSLTGPFSPERPDID----LEVDEPRYVY 238          
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: UPI00114CC053 (hypothetical protein n=2 Tax=Candidatus Thiosymbion oneisti TaxID=589554 RepID=UPI00114CC053)

HSP 1 Score: 89.0 bits (219), Expect = 1.070e-14
Identity = 83/282 (29.43%), Postives = 124/282 (43.97%), Query Frame = 3
Query:  567 LVELTFMGRLGNNLFEYATARVVADKLGWAL-----SLKALLNKERFKTLLKP--EGKACFPGVRPLGPPPSSAEMAKLEEVRFR----GLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRH-----IVVDDDPRYIY 1364
            +++L   G +GNNLF+YA AR++A+ LG+AL     S K   N  + + LL    +      G R   P   +A M       FR    G++    D   RKI ++ +F+ Y +F + K R+R   A+DP   G     P+D+VIH R     +            +  +FY  +L+        +   G     +  VK    + G + I     D FR   F+    R I +QSTF+WWA FL  A E+H P  P       R      + V+D+ RY Y
Sbjct:    1 MIQLRMQGLIGNNLFQYAFARILAEDLGYALEVKHSSYKPGKNIPQLEDLLSHFRDAPLAIDGKRFSRPVDRTALMGHNGFDGFRIDLEGMRNCRQD---RKILIKGFFERYEIFRTHKSRIRSWFAVDPIDLGYHI-APDDIVIHIRRGDFIVFSRA--------ISLSFYLDLLEKLDFARLYICGFG----LDEEVKASFSKFGPIYIEGSPIDDFR---FMIGFNRIIQSQSTFAWWAGFLSKAEEIHAPVPPVNATPFERRYPHIDLRVNDESRYHY 263          
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: UPI000E65365C (hypothetical protein n=2 Tax=Calidifontimicrobium TaxID=2828371 RepID=UPI000E65365C)

HSP 1 Score: 82.8 bits (203), Expect = 3.140e-13
Identity = 87/291 (29.90%), Postives = 125/291 (42.96%), Query Frame = 3
Query:  570 VELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGK-----------ACFPGVRP---LGPPPSSAEMAKLEEVRFRGLQRE--MADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVT-GRHIVVDDDPRYIYRDANGLVVR 1391
            VEL F+G LGNNLF+YA ARV+A++LG AL  +    +  F+ + +  G            A  P  RP   +  P     M + +     G+     +     R+I ++ +FQ        +DR+R+   L P      A GP D+VIH R     LD     KL  + L+ +FY   L+S    P TV V G       L   L           +  D       L+ A R ++A STFSWW A+L    +V  P +P R   +  R  V  + P   Y   +G+ VR
Sbjct:    3 VELHFVGHLGNNLFQYALARVLAEELGLALQCRPARERPGFEAVERASGIVDRLDQWHHRFADVPLQRPGREIDHPQWRQVMGEQDGWHGHGVDLPFLLRSGRERRIVLRGYFQRTEYVHPWRDRVRRWYRLPPPAPA-FAAGPRDVVIHVRQ---SLDM----KLLGRALEPSFYARALESMTPAPRTVHVCGLGLDDPALTAALAPWRPR----RLDLDAVGTLAVLAHARRIVLANSTFSWWGAYLATEAQVIHP-RPVRGYWSLDRPEVALEVPEDRYTVVDGVPVR 280          
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A7R9SV16_9CHLO (Hypothetical protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SV16_9CHLO)

HSP 1 Score: 80.1 bits (196), Expect = 3.550e-12
Identity = 86/315 (27.30%), Postives = 134/315 (42.54%), Query Frame = 3
Query:  564 GLVELTFMGRLGNNLFEYATARVVADKLGWAL-SLKALLNKE---------------------RFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQR---------EMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYR--NYKAELDKE-----QYEKLHFQ-DLDFNFYDTVLKSTQDRPETVWVVGEFHKYN-PLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPF------QPTRKAVTGRHIVVDDDPRYIYRD 1370
            G+V L + GR GNNLF+YA AR++  +LG+ + +++A   +                      R +T L  +     P V        +A+M  L E     +           ++  P  R +    WF   R  AS  + +R++           APG  D+V+H R  + +  LD+      + EKL         +Y  VL   Q     V ++ E    N PLV  L +E     +A    D    F +L  A + +M+ S+F+WW A L NATE+H+P       Q  R+      +++DD+PRYIY D
Sbjct:  133 GVVSLDYNGRFGNNLFQYAFARILNLELGFEVQTVQAHAGRSNLYEASRIMHERSVVPESVPARTRTKLSDDFMEDQPNVVVRSNKFGNADMCSLIETCRPAIVHIIDAFLHDYQLFKPYKRLLRCH-WFNFPRFEASNSETVRRV----------GAPGAEDVVVHVRLGDLETRLDRSFEESGKNEKLFLHIPAPLAYYKQVLSGIQF--SRVLLLVEPQSVNHPLVLDLVKEFDAKVLASQ--DFLLDFWYLLEAKKIVMSPSSFAWWGALLSNATEIHYPLIGYYHHQNVRRV----KLIIDDEPRYIYHD 428          
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A7C7C2S9_9FLAO (Alpha-1,2-fucosyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7C7C2S9_9FLAO)

HSP 1 Score: 66.6 bits (161), Expect = 1.540e-8
Identity = 62/270 (22.96%), Postives = 124/270 (45.93%), Query Frame = 3
Query:  567 LVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYR--NYKAELDKEQYE---KLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRH-IVVDDDPRY 1358
            ++++ ++GR+GNN+F+Y+  R++A++LG  L    +           PE +A +  V       ++ ++  +++   + +  +      + + +  +FQ+Y ++   K+RLRQ     P      A    D+VIH R  +Y + L    +    + +   ++ +    +   T D   +   +  F K NP +      +GNV          + F +L+ A + I+++S+FS+W  FL  A E++ P         GR  + VDD+ RY
Sbjct:    1 MIKVNYIGRMGNNMFQYSFGRILAEELGMHLVSNPI-----------PEFRATYQSVPGKS---NNTDVLIVDDSNCKDILDKKESLVDKSLLLNGFFQQYTLYKPYKERLRQWFK--PKKMIEKAKEA-DIVIHIRLGDYMSTLIPSHWALPAEYYLSCIEMSSAKNIHIVTDDPNHSF--LNNFSKLNPKII-----NGNV---------IQDFTYLTSAKKIILSRSSFSFWVGFLSEAEEIYSPNPDKGLWADGRQDLFVDDEERY 237          
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A7K4H580_9ARCH (Alpha-1,2-fucosyltransferase n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A7K4H580_9ARCH)

HSP 1 Score: 65.9 bits (159), Expect = 2.530e-8
Identity = 66/269 (24.54%), Postives = 113/269 (42.01%), Query Frame = 3
Query:  567 LVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFP----FQPTRKAVTGRHIVVDDDPRYI 1361
            ++ +T  G LGNN+++YA AR++A+K    L+  ++        ++   GK      R +     S     +  +               KI M  +FQ Y      K+ +++   LD +   P     ND+V+  R          Y   +    ++ F + + K   DR   +     F   +P  K L++   NV++ +        F  + ++ +  +  STF WWAAFL NA+E+++P    F PT   V      VDD+ RYI
Sbjct:    1 MITVTKNGTLGNNMWQYAVARIIAEKNNLKLNCFSIPGFHNTNNVVT--GKIINSPTRQI-----SGHRFDMNSIGSNT-----------KIIMNGFFQRYEYIKEYKNEVKEWFKLDINT--PFEVNKNDLVVSIRR-----GWNGYPVYYCPPQEY-FIENLNKIDCDR--IILCTDTFE--DPFFKFLEKL--NVEVIKANYSPLEQFSLIQKSNKIFLTSSTFCWWAAFLSNASEIYYPWINNFIPTENGVNW---YVDDEDRYI 234          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G104_ECTSI6.950e-12364.91Alpha-1,2-fucosyltransferase, putative n=2 Tax=Ect... [more]
D7G107_ECTSI4.780e-8964.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F2TVY1_SALR58.250e-2429.47Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A349D2R7_9BACT2.110e-2129.85Uncharacterized protein n=1 Tax=Candidatus Peribac... [more]
A0A2H0RNU4_9BACT1.390e-1826.15Uncharacterized protein n=1 Tax=Candidatus Peregri... [more]
UPI00114CC0531.070e-1429.43hypothetical protein n=2 Tax=Candidatus Thiosymbio... [more]
UPI000E65365C3.140e-1329.90hypothetical protein n=2 Tax=Calidifontimicrobium ... [more]
A0A7R9SV16_9CHLO3.550e-1227.30Hypothetical protein n=1 Tax=Polyblepharides amyli... [more]
A0A7C7C2S9_9FLAO1.540e-822.96Alpha-1,2-fucosyltransferase n=1 Tax=Flavobacteria... [more]
A0A7K4H580_9ARCH2.530e-824.54Alpha-1,2-fucosyltransferase n=1 Tax=Candidatus Lo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1286contigF-serratus_M_contig1286:205553..208719 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.8
Seed ortholog evalue3.6e-98
Seed eggNOG ortholog2880.D7G104
Hectar predicted targeting categoryother localisation
EggNOG OGs2D12B@1,2SGFI@2759
Ec32 ortholog descriptionalpha-1,2-fucosyltransferase, putative
Ec32 orthologEc-22_001510.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2010
Cds size819
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1286.2119.1prot_F-serratus_M_contig1286.2119.1Fucus serratus malepolypeptideF-serratus_M_contig1286 206156..208112 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929228.1803966-UTR-F-serratus_M_contig1286:205552..2060281622929228.1803966-UTR-F-serratus_M_contig1286:205552..206028Fucus serratus maleUTRF-serratus_M_contig1286 205553..206028 +
1690962759.3306806-UTR-F-serratus_M_contig1286:205552..2060281690962759.3306806-UTR-F-serratus_M_contig1286:205552..206028Fucus serratus maleUTRF-serratus_M_contig1286 205553..206028 +
1622929228.200353-UTR-F-serratus_M_contig1286:206047..2061551622929228.200353-UTR-F-serratus_M_contig1286:206047..206155Fucus serratus maleUTRF-serratus_M_contig1286 206048..206155 +
1690962759.343205-UTR-F-serratus_M_contig1286:206047..2061551690962759.343205-UTR-F-serratus_M_contig1286:206047..206155Fucus serratus maleUTRF-serratus_M_contig1286 206048..206155 +
1622929228.2775388-UTR-F-serratus_M_contig1286:208112..2087191622929228.2775388-UTR-F-serratus_M_contig1286:208112..208719Fucus serratus maleUTRF-serratus_M_contig1286 208113..208719 +
1690962759.3877363-UTR-F-serratus_M_contig1286:208112..2087191690962759.3877363-UTR-F-serratus_M_contig1286:208112..208719Fucus serratus maleUTRF-serratus_M_contig1286 208113..208719 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929228.2213397-CDS-F-serratus_M_contig1286:206155..2064761622929228.2213397-CDS-F-serratus_M_contig1286:206155..206476Fucus serratus maleCDSF-serratus_M_contig1286 206156..206476 +
1690962759.3546035-CDS-F-serratus_M_contig1286:206155..2064761690962759.3546035-CDS-F-serratus_M_contig1286:206155..206476Fucus serratus maleCDSF-serratus_M_contig1286 206156..206476 +
1622929228.2358348-CDS-F-serratus_M_contig1286:207017..2071401622929228.2358348-CDS-F-serratus_M_contig1286:207017..207140Fucus serratus maleCDSF-serratus_M_contig1286 207018..207140 +
1690962759.3627882-CDS-F-serratus_M_contig1286:207017..2071401690962759.3627882-CDS-F-serratus_M_contig1286:207017..207140Fucus serratus maleCDSF-serratus_M_contig1286 207018..207140 +
1622929228.2530198-CDS-F-serratus_M_contig1286:207435..2075761622929228.2530198-CDS-F-serratus_M_contig1286:207435..207576Fucus serratus maleCDSF-serratus_M_contig1286 207436..207576 +
1690962759.371948-CDS-F-serratus_M_contig1286:207435..2075761690962759.371948-CDS-F-serratus_M_contig1286:207435..207576Fucus serratus maleCDSF-serratus_M_contig1286 207436..207576 +
1622929228.2659566-CDS-F-serratus_M_contig1286:207878..2081121622929228.2659566-CDS-F-serratus_M_contig1286:207878..208112Fucus serratus maleCDSF-serratus_M_contig1286 207879..208112 +
1690962759.3799229-CDS-F-serratus_M_contig1286:207878..2081121690962759.3799229-CDS-F-serratus_M_contig1286:207878..208112Fucus serratus maleCDSF-serratus_M_contig1286 207879..208112 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1286.2119.1

>prot_F-serratus_M_contig1286.2119.1 ID=prot_F-serratus_M_contig1286.2119.1|Name=mRNA_F-serratus_M_contig1286.2119.1|organism=Fucus serratus male|type=polypeptide|length=273bp
MGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGKACFPG
VRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFAS
EKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDL
DFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTD
QFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHI
VVDDDPRYIYRDANGLVVRPQL*
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mRNA from alignment at F-serratus_M_contig1286:205553..208719+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1286.2119.1 ID=mRNA_F-serratus_M_contig1286.2119.1|Name=mRNA_F-serratus_M_contig1286.2119.1|organism=Fucus serratus male|type=mRNA|length=3167bp|location=Sequence derived from alignment at F-serratus_M_contig1286:205553..208719+ (Fucus serratus male)
ACGGAATCCTCCTCTCCCGTAGTCTAGGACGAAAATCTTGCAACCCCTCG TTTTTTTATCGTCCCATTGGCGTTCGAGCTCAGTCATTGGTTGTGTCGAA GACTCCCATACAACCGATTGGCGCTTCGAGATACGAGACTGTGATTTCGA TCGGAGACTGCGAATGCCGAATTTATCCGTAGTATAGTCTAGTGAGGCAT ACGAAAGGGTATTGCATTGAACTTAGGCGGGTTTTCGAGGAGCACGGGTG AGACAAAAGAAGCTACAGGCAACAATTCGATCGCTGTGGCGCCTCATAAG CACGGAGTTCCTATGCGATAGTATATGGCGCGCTCTCGGTTGCTGCTTGG ATTTGTCGCAGCTGGACTTCTCGCCGTGGTTCTGATCTACAGCGGTTTGA GTAATGGTGGCTTTATTCGTTATCAAACCGTGCTTCCGCCGAAGCGGGCC GGTGAACATGAGTTCAACGGCCGTGAGCAGCAGCAGCAACAACAGCAGCA GCAGCAACAACAGCAGCAGCAGCAACAACAGCAGCAGCAACTTCAGCAGC CGCAGGAGGAGGAACAAGAAGAAAGGGGACCAGGACTTGTCGAACTGACC TTCATGGGCCGTCTGGGCAACAATTTGTTTGAGTACGCCACCGCGCGCGT CGTCGCCGATAAACTCGGCTGGGCGCTGTCGCTCAAGGCTCTTTTAAACA AAGAGAGGTTCAAGACTCTTTTGAAGCCCGAGGGCAAGGCATGTTTCCCA GGGGTGCGACCATTGGGCCCTCCACCGTCGAGCGCGGAGATGGCGAAGCT GGAGGAGGTCCGCTTTCGAGGCCTTCAGAGGGAAATGGCGGACCCTACTC CACGGAAAATTCACATGCAAGATTGGTTTCAAGAATACCGTGTTTTCGCG TCGGAAAAAGATCGTCTACGCCAGGTAAGAAGCGGATCCTTCTTCTTGCT CGTTACGTGAATAGTACCAGTACATAGCTCTCTGCGCCTACGGTACTCCC TTGCACTACCCTTTCTTCTCTCGAGGTTAGTTGGAACTCGCACAAAGGCC AAGACGCGATCAGCGGGTAACCGGCGAATACATCGCGCTAAATAGGATAC GGTGTTGGGTCGGCGGTGCCGATCCGCATCTTATACCCGCTGGTAGAAAT GCTCGATGGTGGGTTTTCCTTTACGTACGCAAGCTTGAAGATCGTCACAC CTCGTGCCTGGAGTATCCGCGTAAGTTCGCTAGTAACAATGATGGTGTCA TGGCGAATGAAGATGTCAAGCGAACCATTCAGGTACAGGTAAGGTTTGAC TGGCAAAACTCGTCGATAAATCGCCGCTGACCCTTGAGGCTGGAACCGAT CCTCCGCTTCCAACGTAGGGCGCGTTTTCTCTCGTAACAATCGCCTGCAT GGCTCACGGTGGAACACTGTGCGTCCTCAGCCGATTACCCCGTCCTACCC TTTTCCCTGCCGCAGATACTGGCCTTAGATCCGTCCTGTTGCGGCCCCAC CGCTCCGGGACCGAACGATATGGTTATACACTATCGCAACTACAAGGCGG AGTTGGACAAGGAGCAGTACGAGAAGCTACACTTCCAGGTGCCCTTGACA CGACTTACAGTCTGTTCTTCTCAATTGCTTCGTAATTCCGAACAAAGAAA TATTACGTTTTTTTTTGCAGTTTTTTTGTGGGCCGGTTAGCAGCACAACT GGCACGAGTGTGAAAAGAAAAAGGACGAGAATCGAAAAAATGGGTGCACG ACGGCTCGAGGCGAGCAAAGTCGAATACGACGCGCCGTGGTCTGACTGGT TCAAGCGATTGAAGTGCTCTGTACGACCGTGCGTCAGGCAAGTTGGTTGG AAACACGTCAGCCGCCGCATTTTCGCTTTCCAGGACTTGGACTTCAATTT TTACGACACGGTCCTCAAAAGTACTCAAGACCGACCCGAAACCGTTTGGG TGGTGGGGGAGTTCCACAAGTACAATCCATTGGTGAAGCGCTTGCAAGAG GAGCACGGCAACGTAAAAATCGCTGTGAGTCGTGTTTTGTTTTCGTTCTG CTCAAAGTTAGACTTTCGAACGCGGGGTTACTTTACTATCCCGTCAGTGG CCGATGCGTCACCGTTCTCTTCCCAAGCGAAGGTCAACTGCCGCTGAAAA GGCGGAACCATTCTCTTTTTATTTTCGTCAAACGGTGCAACGGTCCTTTC CGAGCATGCACGAACGAATCGCGTGCATAGAAATCAAGCCGATATGCTTG GTATACATTTTTGGCAAAACGCAACCCTTCGGACTTTCTCCTCGTCGCCT CTCTGAACGAAACGCCGGCCTTGCAGGAGATGGTTACCGATCAGTTCCGC GCGTTCTGCTTCCTGAGTCGCGCTCCTCGCTTCATTATGGCTCAAAGCAC CTTCAGCTGGTGGGCAGCGTTCCTGGGCAACGCAACCGAGGTGCACTTTC CGTTCCAGCCGACGCGGAAGGCCGTCACCGGGCGACATATCGTTGTCGAC GATGATCCTCGTTATATTTACCGAGACGCCAATGGACTTGTGGTGCGTCC TCAACTGTGATGGCGAGAGAGGAAATCATGCACAAACCTGGTGTGCTGCG AGGTTTGTCGGAAATCCTCCCGACCTGGTCGTCGGACACGACAAGCTGTG ATTCAAGTGCCAGCGCACCTATACTCCTGCTGGATTTGGGGCGTTAGCAC CATGGATTGAATATACTTCTAGTGACGTTTGAGAAGGCGGATGAGGAACA GCTTTTGTAACATTTTGTAAAAAATTATATTTTTCACTCTTTCAAAGGAT TTTTTGTCACGTGTATATTGTGTCCGGCTTACACGATGCGATGTGTGAGA TTTTTTATAACTTCAGTCATGTTTCGAAAAAAGTGGCCGCGTAAGTGGTG ACCCCTTGCAGATGAACAGCAAAGACCCTGTCTGGGATGTTTCCGCCGAG GGTGCTGTCATGTACAGCTGTCGTCACGGCGGGTGGGTGGGTGTATTTTA CACTGATAGGGACATAGACTTGTAGGCACACGAAATCGTCTTGCGTTCAT TCTCCTCGTCGGTGCTGCCGTGGGGTCTGTCTGCCCTTTCGCGTTTCTCG GATACTAAATTTGAGCCCCTAGTGCTCGTTTTCTTGCCACAAAGAGTGGA CGCATGACCCGTCAAAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1286:205553..208719+

>mRNA_F-serratus_M_contig1286.2119.1 ID=mRNA_F-serratus_M_contig1286.2119.1|Name=mRNA_F-serratus_M_contig1286.2119.1|organism=Fucus serratus male|type=CDS|length=1638bp|location=Sequence derived from alignment at F-serratus_M_contig1286:205553..208719+ (Fucus serratus male)
ATGGGCCGTCTGGGCAACAATTTGTTTGAGTACGCCACCGCGCGCGTCGT
CGCCGATAAACTCGGCTGGGCGCTGTCGCTCAAGGCTCTTTTAAACAAAG
AGAGGTTCAAGACTCTTTTGAAGCCCGAGGGCAAGGCATGTTTCCCAGGG
GTGCGACCATTGGGCCCTCCACCGTCGAGCGCGGAGATGGCGAAGCTGGA
GGAGGTCCGCTTTCGAGGCCTTCAGAGGGAAATGGCGGACCCTACTCCAC
GGAAAATTCACATGCAAGATTGGTTTCAAGAATACCGTGTTTTCGCGTCG
GAAAAAGATCGTCTACGCCAGATGGGCCGTCTGGGCAACAATTTGTTTGA
GTACGCCACCGCGCGCGTCGTCGCCGATAAACTCGGCTGGGCGCTGTCGC
TCAAGGCTCTTTTAAACAAAGAGAGGTTCAAGACTCTTTTGAAGCCCGAG
GGCAAGGCATGTTTCCCAGGGGTGCGACCATTGGGCCCTCCACCGTCGAG
CGCGGAGATGGCGAAGCTGGAGGAGGTCCGCTTTCGAGGCCTTCAGAGGG
AAATGGCGGACCCTACTCCACGGAAAATTCACATGCAAGATTGGTTTCAA
GAATACCGTGTTTTCGCGTCGGAAAAAGATCGTCTACGCCAGATACTGGC
CTTAGATCCGTCCTGTTGCGGCCCCACCGCTCCGGGACCGAACGATATGG
TTATACACTATCGCAACTACAAGGCGGAGTTGGACAAGGAGCAGTACGAG
AAGCTACACTTCCAGATACTGGCCTTAGATCCGTCCTGTTGCGGCCCCAC
CGCTCCGGGACCGAACGATATGGTTATACACTATCGCAACTACAAGGCGG
AGTTGGACAAGGAGCAGTACGAGAAGCTACACTTCCAGGACTTGGACTTC
AATTTTTACGACACGGTCCTCAAAAGTACTCAAGACCGACCCGAAACCGT
TTGGGTGGTGGGGGAGTTCCACAAGTACAATCCATTGGTGAAGCGCTTGC
AAGAGGAGCACGGCAACGTAAAAATCGCTGACTTGGACTTCAATTTTTAC
GACACGGTCCTCAAAAGTACTCAAGACCGACCCGAAACCGTTTGGGTGGT
GGGGGAGTTCCACAAGTACAATCCATTGGTGAAGCGCTTGCAAGAGGAGC
ACGGCAACGTAAAAATCGCTGAGATGGTTACCGATCAGTTCCGCGCGTTC
TGCTTCCTGAGTCGCGCTCCTCGCTTCATTATGGCTCAAAGCACCTTCAG
CTGGTGGGCAGCGTTCCTGGGCAACGCAACCGAGGTGCACTTTCCGTTCC
AGCCGACGCGGAAGGCCGTCACCGGGCGACATATCGTTGTCGACGATGAT
CCTCGTTATATTTACCGAGACGCCAATGGACTTGTGGTGCGTCCTCAACT
GTGAGAGATGGTTACCGATCAGTTCCGCGCGTTCTGCTTCCTGAGTCGCG
CTCCTCGCTTCATTATGGCTCAAAGCACCTTCAGCTGGTGGGCAGCGTTC
CTGGGCAACGCAACCGAGGTGCACTTTCCGTTCCAGCCGACGCGGAAGGC
CGTCACCGGGCGACATATCGTTGTCGACGATGATCCTCGTTATATTTACC
GAGACGCCAATGGACTTGTGGTGCGTCCTCAACTGTGA
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