prot_F-serratus_M_contig1286.2113.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1286.2113.1
Unique Nameprot_F-serratus_M_contig1286.2113.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length778
Homology
BLAST of mRNA_F-serratus_M_contig1286.2113.1 vs. uniprot
Match: D8LLY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY3_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 6.490e-116
Identity = 366/708 (51.69%), Postives = 430/708 (60.73%), Query Frame = 0
Query:    1 MVDFSFSHVAPSCLPAPAELDS-----DDDMHY--------TALSLRECSLGDSGVSELAHSPWVYGDVAARALSLRHNQITATGARALFEALRSS--SADRLLYLQLDFNPLGDAGAQPLPAYLKQRAARGGGGLEELSLRFCGIGPAGCRYISSALAKSAASAAVGEISGKGGRSDSSGERVPLNATRDPPNRELPSE----DDARRAMPEAGTGPEQAMDGELSLAEPPACGFRRLLLTGN-RLGDSGARALASALAKDHSVEVLDLSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLNADQGTLETLELAGNSIGDSGALALARGLAGAGGGGREHSHRRDKNSILGQRKRGLRXXXXXXXXXXXXXXXXXXXXXXXXXXR-----VVLEELELAGNPLSLSAVRAGEVAKKNASLYKSAGGALSSLLNQFVEESYY----------------RPNTLSSTSGDVGERNGAPVLRCAIAAFGTALRDEAC-----------------SLKVLGLARTGVTDSDVLMLAASLRERDTDSPLEDVEVALNELSVEALKAVRLAVESPTVPGSGNETHEPHISADG-RWPKARDRGDGRRRRGPGPPRSRGAAFGGRRDENDD---EERAAKG-EVQKYTPLGGNVELELFGRKVASFHQGRVEESSLDVQVFGKRVRFERPSTASGAYRRGS 645
            M+DFSFS + P  L    ++D+     +   H         +ALSLRECSLGD GV+E+A SPWV G    RALSLR NQ+TA G RAL ++LRS+  S DRL  L+LDFNP+GDAGAQPLPAYLK+RAARGGGGLEELSLRFC IGPAG  Y+SSAL KSAA+A                 ++  N   + P  E P+                    +    E+ L  P A G RRLLLTGN RLGD+GA+ALASAL KD+S++VLDL+RC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +A    LE LEL GN +GD+GA+ALA GL G    G        K  I  +R  GLR XXXXXXXXXXXXXXXXXXXXXXXXX      VVLEELELAGN L+LSA +A   AK + SLYKSAGGALSSLL  FV+ESYY                 P +L + +G V ER     LRCA+A  G AL  +                   SLK +GLARTG+T+ D   LAA+LR R  DSPLE+VEV LN LSV+A +A+RLAVESPT P   + +    +  +G R            R  P  P         RR        EER+A+G EV +Y P GG+VEL LFG+K ASF Q       LDV+VFGKRVRFER   +  + R GS
Sbjct:   37 MLDFSFSPLGPRGLQ-DTDIDAAGVVEEGQQHRHPNTNPPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSATDSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAG--YLSSALLKSAAAA-----------------KIAANDDANSPASEAPTTAGXXXXXXXXXXXXXXXXXKKGGAEVVLPPPVASGIRRLLLTGNDRLGDAGAKALASALKKDNSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAGSSALECLELQGNHVGDAGAVALADGLVGGNNRGGRRXXGASKQGISSRRGPGLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGVVLEELELAGNALTLSASQAAAQAKSS-SLYKSAGGALSSLLTTFVDESYYGGNSNNRGSVQDASALTPPSLGNPAGGVAERP----LRCAVAELGEALAGQGARGXXXXXXXXXXXXGCPSLKAVGLARTGLTERDAARLAAALRARPVDSPLEEVEVGLNGLSVKAAEAIRLAVESPTAPHDRSSSFVDDLEKNGGRGRXXXXXXXXXXRHDPAAPGVDEPGLRSRRGTATAAPAEERSARGAEVGEYVPPGGSVELGLFGKKFASFQQAGGSGRELDVEVFGKRVRFERTGGSPPSPRPGS 719          
BLAST of mRNA_F-serratus_M_contig1286.2113.1 vs. uniprot
Match: A0A6H5JEB8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB8_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 5.120e-71
Identity = 246/426 (57.75%), Postives = 281/426 (65.96%), Query Frame = 0
Query:    1 MVDFSFSHVAPSCLPAPAELDS----DDDMHY---------TALSLRECSLGDSGVSELAHSPWVYGDVAARALSLRHNQITATGARALFEALRSS--SADRLLYLQLDFNPLGDAGAQPLPAYLKQRAARGGGGLEELSLRFCGIGPAGCRYISSALAKSAASAAVGEISGKGGRSDSSGERVPLNATRDPPNRELPSEDDARRAMPEAGTGPEQAMDG--ELSLAEPPACGFRRLLLTGN-RLGDSGARALASALAKDHSVEVLDLSRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLNADQGTLETLELAGNSIGDSGALALARGLAGAGGGGREHSHRRDKNSILGQRKRGLRXXXXXXXXXXXXXXXXXXXXXXXXXXR----VVLEELELAGNPLSLSAVRAGEVAK 404
            M+DFSFS + P  L    ++D+    ++  H+         +ALSLRECSLGD GV+E+A SPWV G    RALSLR NQ+TA G RAL ++LRS+  S DRL  L+LDFNP+GDAGAQPLPAYLK+RAARGGGGLEELSLRFC IGPAGCRY+SSAL KSAA+A +                   +A  DP N                         G  E  L  P A G RRLLLTGN R+GD+GA+ALASAL KD S++VLDL+RC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LL+A    LE LEL GN +GD+GA+ALA GL G    G        K     +R  GLR  XXXXXXXXXXXXXXXXXXXXXX       VVLEELELAGN L+LSA +A   AK
Sbjct:   90 MLDFSFSPLGPRGLQ-DTDIDAAGVVEEGQHHRYPDTNSPPSALSLRECSLGDLGVAEVARSPWVRGKAGVRALSLRQNQVTAAGVRALLDSLRSAADSGDRLACLELDFNPIGDAGAQPLPAYLKERAARGGGGLEELSLRFCDIGPAGCRYLSSALLKSAAAAKI-------------------SANDDPNNSAXXXXXXXXXXXXXXXXXXXXXXKGGAEFGLPPPAASGIRRLLLTGNDRIGDAGAKALASALKKDSSLQVLDLTRCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLHAGSSALECLELQGNHVGDAGAVALADGLVGGSKRGGRXXXXXAKQGSSSRRGPGLRSLXXXXXXXXXXXXXXXXXXXXXXKGGXXGGVVLEELELAGNALTLSASQAAAQAK 495          
BLAST of mRNA_F-serratus_M_contig1286.2113.1 vs. uniprot
Match: A0A835Z931_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z931_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.210e-21
Identity = 70/144 (48.61%), Postives = 85/144 (59.03%), Query Frame = 0
Query:    2 VDFSFSHVAPSCLPAPAELDSDDDMHYTALSLRECSLGDSGVSELAHSPWVYGDVAARALSLRHNQITATGARALFEALRSSSADRLLYLQLDFNPLGDAGAQPLPAYLKQRAARGGGGLEELSLRFCGIGPAGCRYISSALAK 145
            +D SFSHV P          S+     + L L+ECSLGD G  ++  S  V        LSLRHN I   G+R+L + LR++  DRL  L LDFN +GDAG QPLPA LK  +    G LE LSLRFCGI  AGCR I+SAL+K
Sbjct:   55 IDLSFSHVGPVGASEVLSGLSEASAAPSGLLLQECSLGDRGALDVVSSTLVSSPEGVGVLSLRHNHIGRVGSRSLLQHLRTAP-DRLQTLVLDFNLIGDAGLQPLPALLKDSS---NGRLESLSLRFCGISAAGCRSIASALSK 194          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1286.2113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLY3_ECTSI6.490e-11651.69Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JEB8_9PHAE5.120e-7157.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z931_9STRA2.210e-2148.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 242..269
e-value: 0.0016
score: 27.7
coord: 214..241
e-value: 0.023
score: 23.9
coord: 55..82
e-value: 1.5
score: 15.8
coord: 85..112
e-value: 0.94
score: 17.3
coord: 118..145
e-value: 0.14
score: 21.3
coord: 466..493
e-value: 0.83
score: 17.7
coord: 348..375
e-value: 0.0011
score: 28.2
coord: 299..326
e-value: 0.0066
score: 25.7
coord: 270..297
e-value: 0.0011
score: 28.2
NoneNo IPR availablePANTHERPTHR24107FAMILY NOT NAMEDcoord: 121..325
coord: 31..145
coord: 302..518
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 28..492
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 59..77
e-value: 0.11
score: 12.7
coord: 29..47
e-value: 1.1
score: 9.5
coord: 219..236
e-value: 0.6
score: 10.3
coord: 269..292
e-value: 6.5E-6
score: 25.8
coord: 121..139
e-value: 1.0
score: 9.6
coord: 301..321
e-value: 7.9E-4
score: 19.3
coord: 88..106
e-value: 0.8
score: 9.9
coord: 242..264
e-value: 1.8E-4
score: 21.3
coord: 350..365
e-value: 1.3
score: 9.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 24..150
e-value: 1.5E-19
score: 71.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 203..327
e-value: 3.3E-31
score: 109.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1286contigF-serratus_M_contig1286:111270..123167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1286.2113.1mRNA_F-serratus_M_contig1286.2113.1Fucus serratus malemRNAF-serratus_M_contig1286 111179..124149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1286.2113.1 ID=prot_F-serratus_M_contig1286.2113.1|Name=mRNA_F-serratus_M_contig1286.2113.1|organism=Fucus serratus male|type=polypeptide|length=778bp
MVDFSFSHVAPSCLPAPAELDSDDDMHYTALSLRECSLGDSGVSELAHSP
WVYGDVAARALSLRHNQITATGARALFEALRSSSADRLLYLQLDFNPLGD
AGAQPLPAYLKQRAARGGGGLEELSLRFCGIGPAGCRYISSALAKSAASA
AVGEISGKGGRSDSSGERVPLNATRDPPNRELPSEDDARRAMPEAGTGPE
QAMDGELSLAEPPACGFRRLLLTGNRLGDSGARALASALAKDHSVEVLDL
SRCRIGDEGARCLAHALRTNTHLRELRLSNNEITGEGALSLASLLNADQG
TLETLELAGNSIGDSGALALARGLAGAGGGGREHSHRRDKNSILGQRKRG
LRRLNLSGNGIGCIGGCALAKALRGSGGRVVLEELELAGNPLSLSAVRAG
EVAKKNASLYKSAGGALSSLLNQFVEESYYRPNTLSSTSGDVGERNGAPV
LRCAIAAFGTALRDEACSLKVLGLARTGVTDSDVLMLAASLRERDTDSPL
EDVEVALNELSVEALKAVRLAVESPTVPGSGNETHEPHISADGRWPKARD
RGDGRRRRGPGPPRSRGAAFGGRRDENDDEERAAKGEVQKYTPLGGNVEL
ELFGRKVASFHQGRVEESSLDVQVFGKRVRFERPSTASGAYRRGSPQTGK
AAFDDGSDEDSEWDHSDERDNDSEDEADGTDDSGSYAEDEKVVDDREMQN
EEDDEDEIDDGIADREQQEEGERDDSDNDTENGDGGKGPRGSLSGGRTYT
STWETRRSKWTLKTSTATLATDNARQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf