mRNA_F-serratus_M_contig1286.2104.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: A0A6H5KH14_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH14_9PHAE) HSP 1 Score: 429 bits (1102), Expect = 1.090e-142 Identity = 219/273 (80.22%), Postives = 235/273 (86.08%), Query Frame = 1
Query: 1 RHEAADEDEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSPETVFCILKHLEGMLPRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLPGSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHVDDPAGKAAVIWMVGEYGEEITEAPYMLEPLVDSWEEESSVDIKMQLLTAAVKVFFKRPPEMQA 756
RHE ADEDE FEIMNLVDPVLRTSNSGAV YERTKAPLLTLMAGGS ETV+CILKHLEGMLPRCPG+FDDE RQFFTRYNEPTGVKYAKVRCLALLAD+ TA+A+IAELGEYA D+D LARQA+RAVGKIC RLPGSAAA IERLID MGMDV YVK+EAVQVV+VL+RK+P WRTEVLPSLQRCLKH+D+PAGKAAVIWMVGEYGEEITEAPYMLEPLVD+WEEE S IKM LLTAAVK+FFKRPPEMQ+
Sbjct: 255 RHEPADEDETFEIMNLVDPVLRTSNSGAVLAAVNCFLVLTKNMPDMRYQVYERTKAPLLTLMAGGSSETVYCILKHLEGMLPRCPGVFDDEYRQFFTRYNEPTGVKYAKVRCLALLADSTTAEAIIAELGEYAGDMDHLLARQAMRAVGKICLRLPGSAAAAIERLIDLMGMDVSYVKAEAVQVVEVLLRKYPQWRTEVLPSLQRCLKHIDEPAGKAAVIWMVGEYGEEITEAPYMLEPLVDAWEEEPSCQIKMHLLTAAVKLFFKRPPEMQS 527
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: A0A835YU68_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU68_9STRA) HSP 1 Score: 289 bits (740), Expect = 1.130e-88 Identity = 148/274 (54.01%), Postives = 198/274 (72.26%), Query Frame = 1
Query: 1 RHEAADEDEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSPETVFCILKHLEGMLPRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLPGSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHV-DDPAGKAAVIWMVGEYGEEITEAPYMLEPLVDSWEEESSVDIKMQLLTAAVKVFFKRPPEMQA 756
R+ ADEDE F +MNL+DPVLRTSNSG V YER +APLLTL AG +PETV C+L H+ + R G+FD E R F+ R+N+ V+ AKV LALLA +A V+AEL EYA D ++AR+++RA+G+ICHR+P A+ G+ L++F+ +D GYV++EA VQ L+R++P WR +VLPSL+RCLK D+PAGKAA+IWMVGEYG EI EAPYMLEPL+D++EEE++V++K+QLLTAA+K+FF RPPE+Q+
Sbjct: 268 RYAPADEDELFSMMNLLDPVLRTSNSGVVLAVIDCFLHLTRDLPDLQPQVYERARAPLLTLTAGAAPETVHCVLAHVLILAQRRAGVFDSEYRLFYARHNDHAHVRRAKVELLALLAGPASAAEVLAELAEYAGGADADMARRSVRAIGEICHRVPEGASLGMGHLLEFLEVDAGYVRAEAALAVQDLLRRYPAWRDQVLPSLRRCLKRAGDEPAGKAALIWMVGEYGAEIPEAPYMLEPLIDAYEEETNVEVKLQLLTAAMKLFFARPPEVQS 541
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: A0A4D9CWN1_9STRA (B2-adapt-app_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWN1_9STRA) HSP 1 Score: 273 bits (699), Expect = 9.210e-83 Identity = 139/275 (50.55%), Postives = 190/275 (69.09%), Query Frame = 1
Query: 1 RHEAADEDEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSPETVFCILKHLEGMLPRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLPGSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHVDD-PAGKAAVIWMVGEYG-EEITEAPYMLEPLVDSWEEESSVDIKMQLLTAAVKVFFKRPPEMQA 756
++ ADE+E F IMNL+DPVLRTSNSG V Y R KAPLLTLMAGG+PE +CILKHLE M+ R PG+FDDE RQ + RYNEPT VKY K+ LA++A+ T ++AEL EYA D+D E++R++IRA+G I RLP +A +ERL+ F+ +D+ ++ E + V++ ++R++P + E LP LQ C++ VD+ P +AA+IWM GEYG + E PY+LEPL+DS+ SS +K+ LLTAA+K+FFKRPPEMQ+
Sbjct: 252 KYHPADEEELFTIMNLLDPVLRTSNSGVVLSTIKCFLHLATAVPDLQPQVYLRVKAPLLTLMAGGNPEVEYCILKHLEAMVHRAPGVFDDEYRQLYVRYNEPTFVKYEKIDILAIIANEETVGDIVAELAEYATDVDQEVSRRSIRAIGNIAFRLPSAAGMILERLVGFLDVDMNSIRPETILVMRDILRRYPERKAEALPRLQSCMRRVDNHPEAQAALIWMTGEYGGKNFPEGPYLLEPLIDSYATISSALVKLSLLTAAIKLFFKRPPEMQS 526
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: A0A7S1C8U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8U9_9STRA) HSP 1 Score: 258 bits (659), Expect = 1.420e-78 Identity = 131/272 (48.16%), Postives = 182/272 (66.91%), Query Frame = 1
Query: 1 RHEAADEDEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSPETVFCILKHLEGMLPRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLPGSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHVDDPAGKAAVIWMVGEYGEEITEAPYMLEPLVDSWEEESSVDIKMQLLTAAVKVFFKRPPEMQ 753
R+ A ++E F+IMN++D LR SNS V YER K PLLTLMA SPET FC++ H+ ++ R PG +DDE +QFF RYN+PT +K+ K+ L +A+A+ A ++AEL EY D+D E+AR AIRA+G++ R+P + IE L++ +DV YV+ E V V+Q L+R++P TEV+PS+ R LK +DDP GKA+VIWM+GEYG I +APYMLEPL+D+ E SV+++ +LLTA VK+FFKR PE+Q
Sbjct: 232 RYRPATQEETFQIMNVLDVCLRVSNSAVVLAAAKCFIELTMELAEIQAQVYERLKTPLLTLMASASPETGFCVMSHIVLLVRRQPGAYDDEFKQFFCRYNDPTPMKHLKLEVLPQVANADNAGEIVAELSEYVSDVDAEMARHAIRAIGQLVVRVPEAGGRVIETLLELNELDVDYVRGETVMVMQDLLRRYPSKATEVVPSMNRTLKKIDDPTGKASVIWMIGEYGHLIADAPYMLEPLIDNVGSEESVEVRCELLTATVKLFFKRAPEVQ 503
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: F0Y5E8_AURAN (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E8_AURAN) HSP 1 Score: 255 bits (652), Expect = 7.060e-78 Identity = 138/280 (49.29%), Postives = 191/280 (68.21%), Query Frame = 1
Query: 1 RHEAADEDEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSP-----ETVFCILKHLEGMLPRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLPGSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHVD---DPAGKAAVIWMVGEYGEEITEAPYMLEPLVDSWEEESSVDIKMQLLTAAVKVFFKRPPEMQ 753
R+E A ++E F++MN++DPVLRTSNSG V YER K PLLTLMAGG+ E ++C+LKH E ++ RC F + R F+ RY+EP+ VK+ KV LA LA +A V+AEL EYA D+D +LA+ AIRA+G I RL A A L++F+ +DV YVK+EA+ V + ++R++P R +VLPSL R LK +D +PAG+AA +++VG++GEEIT+APYMLEPL+D++ E+SVD+K+ LLTAA ++FFKRPPEMQ
Sbjct: 244 RYEPASDEETFQVMNVLDPVLRTSNSGVVLECIGCFVNLTKHLPELHAQVYERLKTPLLTLMAGGAHGGGDFELLYCLLKHAELLVFRCREAFQPDYRNFYIRYDEPSPVKHVKVHLLAELASDQSADDVMAELKEYAADVDADLAKAAIRAIGAIAGRLRTKAEAATRALVEFLELDVAYVKAEALLVAKDVLRRYPERRGDVLPSLARYLKDLDGSANPAGRAAALFIVGQWGEEITDAPYMLEPLIDAYGSETSVDVKLALLTAATRLFFKRPPEMQ 523
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: A0A7S2SSW9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSW9_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.610e-77 Identity = 131/272 (48.16%), Postives = 182/272 (66.91%), Query Frame = 1
Query: 1 RHEAADEDEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSPETVFCILKHLEGMLPRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLP-GSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHVDDPAGKAAVIWMVGEYGEEITEAPYMLEPLVDSWEEESSVDIKMQLLTAAVKVFFKRPPEM 750
R+ DE E F IMNL+DPVLRT+NSG V YER KAP+LTL+AGGSPE V+C+LKH E ++ RCPG+FD++ +QF+T++NEP VKY KV LA L + N ++ EL Y ++D LAR AI+A+GK+ +LP G A E+L++ + +D+ YV++EA+ V++ L+R++P VLP L RCL+ VD+P KAAV+WM+GEYGEEI EAPY LE +D++E+ S +K+ LLT +FFKRPPE+
Sbjct: 241 RYSPNDEQEIFTIMNLLDPVLRTTNSGVVLTTIKVFIHLTANLPHVHQQLYERIKAPVLTLVAGGSPELVYCLLKHTELLIHRCPGIFDEDYKQFYTKFNEPLHVKYLKVSLLAQLTNVNNRTDILEELSVYVSEVDVGLARSAIQAIGKVGFKLPSGFEGAAFEKLVELLDLDIDYVRAEALLVLKDLLRRYPERHASVLPILPRCLQEVDEPESKAAVLWMLGEYGEEIVEAPYALEQEIDNYEQGDSAVVKLALLTCTCTLFFKRPPEV 512
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: A0A7R9U8Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8Z4_9STRA) HSP 1 Score: 254 bits (649), Expect = 8.490e-76 Identity = 127/273 (46.52%), Postives = 182/273 (66.67%), Query Frame = 1
Query: 1 RHEAADEDEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSPETVFCILKHLEGMLPRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLPGSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHVDDPAGKAAVIWMVGEYGEEITEAPYMLEPLVDSWEE-ESSVDIKMQLLTAAVKVFFKRPPEMQ 753
R+E DEDE F IMNL+DPVLRTSNSG V YER KAPLLTLM GGS E FCILKH+ ++ RCPG+FD + RQF+ R+NEP+ +K+ KV LA +A + ++ EL E D +PE+AR++IRA+ KI RLP ++++ F+ +DV YV++EA + ++ L+RK P R +VLP+L + L+ + +P G+AA++W+VGEYG E EAPY+LE +D + + + D+++QLLTA +K+FF+RPPE+Q
Sbjct: 262 RYEPTDEDETFNIMNLLDPVLRTSNSGVVLACVKCFIHLTKNMPDLHWQVYERMKAPLLTLMTGGSDEVCFCILKHVRTLVHRCPGIFDPDYRQFYPRFNEPSSIKFIKVDVLAAIAADGSLPDIVGELAEMVSDANPEMARRSIRAIAKIGLRLPDGVGVVFDKMLQFLDLDVDYVQAEASKAMRDLLRKHPERRADVLPTLCKVLRSISEPEGRAAIVWIVGEYGAETKEAPYVLETFIDGYSDLADNYDMRLQLLTATMKLFFRRPPEVQ 534
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: A0A7S3HTK5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTK5_9STRA) HSP 1 Score: 242 bits (618), Expect = 3.550e-73 Identity = 130/275 (47.27%), Postives = 179/275 (65.09%), Query Frame = 1
Query: 1 RHEAADEDEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSPETVFCILKHLEGML--PRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLPGSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHVDDPAGKAAVIWMVGEYGEEITEAPYMLEPLVDSWEEESSVDIKMQLLTAAVKVFFKRPPEMQA 756
++ A+EDE + IMNL+DPVLRT+NSGAV Y+R K P+LTL+ G E+ +C+LKHLE ML P G+FDDE RQFF RYNE VK+ KV L L+ + A+ + +EL EY D+D EL+++AI+++G+I R+ G A L+ + MD YV+S+A V+ ++R P VLP L R LK VDD A +A+++WM+GEY + I EAPYMLE +++++EEE SV IK+QLLTA++KVFFKRPPEM A
Sbjct: 126 KYHPANEDETYAIMNLLDPVLRTANSGAVLATFKCFTSLTAKMPELQPQIYQRAKPPMLTLVTGAHSESQYCMLKHLEVMLRKPAAKGVFDDEYRQFFVRYNEAPHVKHLKVDLLPLITNPGNARDIASELSEYVTDVDAELSKRAIKSIGEIAMRIDGVADEMTMALLQLIDMDSPYVRSQAASVLVNVVRLNPSLNIMVLPYLSRMLKRVDDAAARASLVWMIGEYADSIVEAPYMLEQIINNYEEEQSVLIKLQLLTASMKVFFKRPPEMHA 400
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: A0A7S4ED65_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED65_9STRA) HSP 1 Score: 239 bits (610), Expect = 2.090e-70 Identity = 127/274 (46.35%), Postives = 184/274 (67.15%), Query Frame = 1
Query: 1 RHEAADEDEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSPETVFCILKHLEGMLPRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLPGSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHVD--DPAGKAAVIWMVGEYGEEITEAPYMLEPLVDSWEEESSVDIKMQLLTAAVKVFFKRPPEMQ 753
R+ +DE F++MN++DPVLRTSN+G V YER KAPLLTLM+ + E ++C+LKH E ++ RC +F E RQF+ RY+EP VK+ KV+ LA LA ++A+ +++EL EYA D DP LA+ AIRA G + RL A A L++F+ ++ YVK+EA+ V + ++RK+P R +VLPSL R L +D +P G+AA +++VG++GEEI APY+LEPL+D++ E+SVD+K+ LLTA ++FFKRPPE+Q
Sbjct: 243 RYAPESDDERFQVMNVLDPVLRTSNAGVVLEAIGCFVQLTKDLPELHAQVYERLKAPLLTLMSKSNNEGLYCLLKHAELLVFRCREVFASEYRQFYIRYDEPACVKHQKVQLLAQLASESSAEDILSELREYAGDCDPSLAKAAIRATGVVASRLRSKAEACCSLLVEFLDLEYSYVKAEALLVAKDVLRKYPERRGDVLPSLGRYLGELDAEEPQGRAAALFLVGQWGEEIPSAPYVLEPLIDAYATETSVDVKLALLTATCRLFFKRPPEVQ 516
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Match: A0A6S8DQV5_9STRA (AP complex subunit beta n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8DQV5_9STRA) HSP 1 Score: 222 bits (566), Expect = 5.630e-64 Identity = 110/263 (41.83%), Postives = 168/263 (63.88%), Query Frame = 1
Query: 22 DEAFEIMNLVDPVLRTSNSGAV---------------------YERTKAPLLTLMAGGSPETVFCILKHLEGMLPRCPGMFDDECRQFFTRYNEPTGVKYAKVRCLALLADANTAQAVIAELGEYAVDIDPELARQAIRAVGKICHRLPGSAAAGIERLIDFMGMDVGYVKSEAVQVVQVLMRKFPHWRTEVLPSLQRCLKHVDDPAGKAAVIWMVGEYGEEITEAPYMLEPLVDSWEEESSVDIKMQLLTAAVKVFFKRPPE 747
+E F IMN++D L+ +NS V Y R K P+LTLM G + E + +LKH+ M+ RCPG+FD E +QF+ YNEP VK+ K++ L L + ++AEL EY D++ E+A+ A+ A G+I ++P A I +L+DF+ M++ YV+S V V++ L+RK+P +VLP+L RCL+ ++DP G+AAVI+M+GEY E+ + PY+LE L+++++ E+ V++K+ LLTA VKVFFKR PE
Sbjct: 251 EETFAIMNILDGELKVANSAVVLGTTKCFLRYADTLPDLKVSIYSRLKQPILTLMTGANRELRYSLLKHIHVMVMRCPGIFDAEFKQFYCHYNEPMHVKFVKLKILPELTNEENVHELVAELSEYVADVNQEMAKAALDAFGRIAVKIPAGADGIINQLLDFINMEIDYVRSGVVCVIKDLLRKYPDRSADVLPALPRCLRKIEDPIGRAAVIFMLGEYAREMRQTPYLLENLIENYDNENDVEVKIALLTATVKVFFKRAPE 513 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1286.2104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1286.2104.1 >prot_F-serratus_M_contig1286.2104.1 ID=prot_F-serratus_M_contig1286.2104.1|Name=mRNA_F-serratus_M_contig1286.2104.1|organism=Fucus serratus male|type=polypeptide|length=252bp RHEAADEDEAFEIMNLVDPVLRTSNSGAVYERTKAPLLTLMAGGSPETVFback to top mRNA from alignment at F-serratus_M_contig1286:519..7691+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1286.2104.1 ID=mRNA_F-serratus_M_contig1286.2104.1|Name=mRNA_F-serratus_M_contig1286.2104.1|organism=Fucus serratus male|type=mRNA|length=7173bp|location=Sequence derived from alignment at F-serratus_M_contig1286:519..7691+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1286:519..7691+ >mRNA_F-serratus_M_contig1286.2104.1 ID=mRNA_F-serratus_M_contig1286.2104.1|Name=mRNA_F-serratus_M_contig1286.2104.1|organism=Fucus serratus male|type=CDS|length=1512bp|location=Sequence derived from alignment at F-serratus_M_contig1286:519..7691+ (Fucus serratus male)back to top |