mRNA_F-serratus_M_contig973.21060.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig973.21060.1 vs. uniprot
Match: D7FTH3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH3_ECTSI) HSP 1 Score: 52.8 bits (125), Expect = 4.950e-6 Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = -3 Query: 373 KCNHMGCGKRPSYGLSGSGRPEVCAEHAGEGMIN 474 +C H GC K PS+G GS RPE+CA+H+ EGM+N Sbjct: 8 RCGHPGCMKHPSHGKDGSKRPEICAQHSQEGMVN 41
BLAST of mRNA_F-serratus_M_contig973.21060.1 vs. uniprot
Match: D7FLW1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW1_ECTSI) HSP 1 Score: 53.5 bits (127), Expect = 2.430e-5 Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = -3 Query: 355 CNHMGCGKRPSYGLSGSGRPEVCAEHAGEGMINVVSKRC 471 C +GC RPSYG S + E C++HA +GM+NVV KRC Sbjct: 248 CEEIGCSMRPSYGKDNSKKAEFCSQHAKQGMVNVVHKRC 286 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig973.21060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig973.21060.1 >prot_F-serratus_M_contig973.21060.1 ID=prot_F-serratus_M_contig973.21060.1|Name=mRNA_F-serratus_M_contig973.21060.1|organism=Fucus serratus male|type=polypeptide|length=147bp RATELALFLCTADALSDVPRAELPLSTSCNVPVGSVSIAPSDGAFPGEVDback to top mRNA from alignment at F-serratus_M_contig973:19407..19882+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig973.21060.1 ID=mRNA_F-serratus_M_contig973.21060.1|Name=mRNA_F-serratus_M_contig973.21060.1|organism=Fucus serratus male|type=mRNA|length=476bp|location=Sequence derived from alignment at F-serratus_M_contig973:19407..19882+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig973:19407..19882+ >mRNA_F-serratus_M_contig973.21060.1 ID=mRNA_F-serratus_M_contig973.21060.1|Name=mRNA_F-serratus_M_contig973.21060.1|organism=Fucus serratus male|type=CDS|length=882bp|location=Sequence derived from alignment at F-serratus_M_contig973:19407..19882+ (Fucus serratus male)back to top |