mRNA_F-serratus_M_contig972.21054.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A6H5K120_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K120_9PHAE) HSP 1 Score: 310 bits (795), Expect = 8.440e-97 Identity = 173/245 (70.61%), Postives = 197/245 (80.41%), Query Frame = 1 Query: 358 ASAGLSTLSLERSKRD----QLPRLSGRFAAICASALALGFAVTVLGSSSACAAAKAGALVVAEGAEKPLHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFGDAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKA---MLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLAGFCLSNI 1071 ASAGLST +E S + P + RFAA+ ASALA+G AV+VL +A AA KA +V E LH+GQK+A+FFRRGGLPDWATLM ISAMPVVELRGGVPVGIWMG+PI KVF LCV GNMIPIP IL L+S FV+K+AKPVL+RAREK+ FGD +SQALALTLFVGIPLPGTGAWTGAMGA LL MPFQKA MLSIFLGVVSAGVIMSCLTL+G+ GAL+ATAVLA FC++N+ Sbjct: 100 ASAGLSTFEMETSPTGLPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKA--IVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASKAMLSIFLGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTNM 342
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A835YGM4_9STRA (Putative small multi-drug export protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGM4_9STRA) HSP 1 Score: 234 bits (597), Expect = 1.650e-69 Identity = 118/177 (66.67%), Postives = 143/177 (80.79%), Query Frame = 1 Query: 544 EKPLHIGQKIAQFFRR-GGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFGDAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLAGFCLSNI 1071 E+ LH+GQKIA + R G LPDW T+ ISAMPVVELRGG+PVG+WMGLPI KVF LCV GNM+PIP IL L+S V+ V KP L+RAR K++EFGDA+ QA+AL LFVGIPLPGTGAWTGAM AS+L MP K++ +IF GVVSAG IM+ LTL+G+ GA+ ATAVLA FC+++I Sbjct: 23 EEHLHVGQKIAMYCRTTGNLPDWLTIALISAMPVVELRGGIPVGLWMGLPIAKVFGLCVAGNMVPIPLILLALRSSAVQNVLKPFLDRARSKAKEFGDAEKQAVALLLFVGIPLPGTGAWTGAMIASILGMPVAKSLAAIFAGVVSAGAIMTALTLAGKAGAIAATAVLAIFCVTSI 199
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A7S1UT50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UT50_9STRA) HSP 1 Score: 200 bits (509), Expect = 6.120e-56 Identity = 109/177 (61.58%), Postives = 128/177 (72.32%), Query Frame = 1 Query: 532 AEGAEKPLHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFG--DAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLAGF 1056 A G + LH+GQKIA +FR GLPD L ISA+PVVELRG VPVG+WMGLPIT V CV GNMIPI IL +L++ ++K+ +P+L+RA +KS G + Q +L FVGIPLPGTGAWTGAMGA LL MPF A+ SIF GVVSAGVIMS LTL+GR GAL A A LA F Sbjct: 59 AAGTTEHLHVGQKIANYFRSFGLPDTVILAIISALPVVELRGAVPVGVWMGLPITTVLPACVFGNMIPIVPILLLLRNERLKKLMEPILSRAEKKSASLGVGSPEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMPFAVALSSIFTGVVSAGVIMSALTLAGRKGALAALAALALF 235
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A7S2Y2N1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2N1_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.290e-55 Identity = 108/181 (59.67%), Postives = 136/181 (75.14%), Query Frame = 1 Query: 505 AAKAGALVVAEGAEKPLHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFGDAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVL 1047 A+ A AL A AE+ LH+GQKIA FR+ GLPD LM ISAMPVVELRGG+PVG WMGLP+ V ALCVVGN+IPI +L LK+ ++KV KPVL+RA EKS+ G ++++LA+ LFVGIPLPGTGAWTGAMGA LL M F+++ +I GV+ AG+IMS L +G+TGA+ AT + Sbjct: 145 ASAAEALSTAVSAEEHLHLGQKIANQFRKTGLPDEVVLMIISAMPVVELRGGIPVGQWMGLPLLNVLALCVVGNLIPIIPLLAALKNKTIQKVMKPVLDRAAEKSKGLGSEKNRSLAVALFVGIPLPGTGAWTGAMGAFLLGMGFRESASAISAGVLLAGIIMSILVKAGKTGAIAATVAM 325
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A7S4AR77_9STRA (Ferredoxin--NADP(+) reductase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A7S4AR77_9STRA) HSP 1 Score: 204 bits (520), Expect = 5.990e-54 Identity = 133/282 (47.16%), Postives = 178/282 (63.12%), Query Frame = 1 Query: 283 NLAIYPASYHSLPHQPPSDGP---TSSCASAGLSTLSL-----ERSKRDQLPRLSGRFA---------AICASALALGFAVTVLGSSSACAAAKAGALVVAEGAEKPLHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFG--DAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLAGFCLSNI 1071 +LA P++ ++ + PS P TS+ +S LS S+ +SKR+ R++ + + SA+AL A+T L SS A AA A VA + LH GQKIA FF GLP WA L ISAMPVVELRG +PVG+WMGLPI +VF +CV+GNM+PI +LF+LK+P ++K+ P+L RA +KS G D + Q ++L FVGIPLPGTGAWTGAMGA LL MP A+ +IF GV SAG IM+ LTL+GR G ++A +VL F ++ + Sbjct: 23 SLAFQPSTRSAVGFRLPSTSPAAPTSTSSSLNLSFSSVGNAFGNKSKRNDDVRMAKNTSQSKRAVLSKVLRRSAVAL-VALTFLTSSPAFAAKTA----VAADPVEHLHTGQKIANFFINFGLPKWAVLSVISAMPVVELRGAIPVGVWMGLPIEQVFPICVLGNMVPIVPLLFLLKNPTLKKLMGPILRRAEKKSAGLGGGDVKKQWVSLAAFVGIPLPGTGAWTGAMGAFLLGMPTPVALSAIFAGVFSAGCIMTALTLAGRKGGIVALSVLIAFAINEL 299
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A7S0EDQ4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EDQ4_9EUKA) HSP 1 Score: 196 bits (497), Expect = 7.700e-54 Identity = 107/184 (58.15%), Postives = 128/184 (69.57%), Query Frame = 1 Query: 520 ALVVAEGAEKPLHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFGDAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLAGFCLSNI 1071 AL A + LH+GQKIA FF+R GLPDWA L+ IS P VELRGGVPVG W+GL F +CVVGNM+PI L L+S V+KVA P+L RA K QS++LAL LFVG+P PGTGAWTGA+ ASLL+MP Q+AM SI GVV AG IM+ LTL+G+TGALLA LA C + + Sbjct: 82 ALASATATGEHLHLGQKIALFFKRTGLPDWAVLLLISMAPAVELRGGVPVGNWLGLSPLTTFVICVVGNMLPILPTLLALRSDAVKKVAAPLLKRAESKLAALPSGQSRSLALALFVGVPAPGTGAWTGAIIASLLDMPLQEAMGSILAGVVLAGGIMTVLTLAGKTGALLA---LAAMCAAGV 262
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A7S1UC67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC67_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.030e-53 Identity = 110/193 (56.99%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 478 VLGSSSACAAAKAG--ALVVAEG-AEKPLHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFGDAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVL 1047 VL S++ A AG A+ +A G AE LH+GQK+A GLP LM ISAMPVVELRGGVPVGIWMGLPI K LCV GNM+PI +L L+ P VRK+ P+L RA+ K+E F D +Q L LFVGIPLPGTGAWTGAMGA LL+MP + A+ +IF GVV A IMS +T++G TG ++AT L Sbjct: 89 VLRSAAVTGAVWAGMAAVALASGDAEGKLHLGQKVAMALESTGLPQEVILMLISAMPVVELRGGVPVGIWMGLPIWKTALLCVTGNMLPILPLLAALRLPLVRKIMSPILKRAQSKAEAFADKSTQVRGLALFVGIPLPGTGAWTGAMGAYLLDMPIKTALGAIFAGVVLAAGIMSLVTVTGTTGGIVATLAL 281
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A6S8U4Q8_9STRA (Ferredoxin--NADP(+) reductase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8U4Q8_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.120e-53 Identity = 114/207 (55.07%), Postives = 143/207 (69.08%), Query Frame = 1 Query: 439 ICASALALGF-AVTVLGSSSACAAAKAGALVVAEGAEKPLHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFG--DAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLA 1050 +C +A A A+ + A AAK+ A+ A + LH GQK+A FFR G+PD A L ISAMPV+ELRG VPVGIWMGLPITKV CV GNM+PI +LF+LK+ ++K+ KP+L+RA +KS G + Q +L FVGIPLPGTGAWTGAMGA LL MP +A+ SIF GVVSAG+IMS +TL+G+ G L A A+LA Sbjct: 97 LCKAATAFSIMAIVTSAAPPAALAAKSSAIAAAPEVVEHLHTGQKVANFFRSFGIPDLAILSIISAMPVIELRGAVPVGIWMGLPITKVLPACVFGNMVPIIPLLFLLKNETLKKLMKPILDRAEKKSSALGVGSPEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMPTARAISSIFTGVVSAGLIMSAITLAGKKGGLAALAILA 303
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A1E7FFY0_9STRA (Ferredoxin--NADP(+) reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFY0_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.280e-53 Identity = 109/194 (56.19%), Postives = 135/194 (69.59%), Query Frame = 1 Query: 553 LHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFG--DAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLAGFCLSNINK**DRLKLSCPSTRIFTE 1128 LH GQKIA FF GLP WA L ISAMPVVELRG +PVG+WMGLPI +V CV+GNMIPI +LF+LK+P ++K+ P+LNRA +K+ G + Q ++L FVGIPLPGTGAWTGAMG+ LL MP A+ SIF GVVSAG+IM+ LTL+GRTG L+A +VL F + + K S T+ F E Sbjct: 131 LHTGQKIANFFMSFGLPKWAVLATISAMPVVELRGAIPVGVWMGLPIQQVLLTCVIGNMIPIVPLLFLLKNPSLKKLMSPILNRAEKKAAGLGVGSLEKQWVSLAAFVGIPLPGTGAWTGAMGSFLLGMPTLFALSSIFAGVVSAGLIMTALTLAGRTGGLIAISVLIAFAANEV-----LFKKSSTPTQEFLE 319
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Match: A0A7S1ZZ20_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ20_TRICV) HSP 1 Score: 190 bits (483), Expect = 4.540e-53 Identity = 97/168 (57.74%), Postives = 124/168 (73.81%), Query Frame = 1 Query: 553 LHIGQKIAQFFRRGGLPDWATLMAISAMPVVELRGGVPVGIWMGLPITKVFALCVVGNMIPIPAILFVLKSPFVRKVAKPVLNRAREKSEEFG--DAQSQALALTLFVGIPLPGTGAWTGAMGASLLEMPFQKAMLSIFLGVVSAGVIMSCLTLSGRTGALLATAVLA 1050 LH+GQK+A +FR GLPD A L ISAMPV+ELRG VPVG+WMGLP+T V CV+GNM+PI ++F+L++ ++K+ P+L+RA +KS G + Q +L FVGIPLPGTGAWTGAMGA LL MP A+ +IF GVVSAGVIMS +TL+G+ G + A A LA Sbjct: 25 LHVGQKVANYFRTFGLPDTAILALISAMPVIELRGAVPVGLWMGLPLTTVLPACVMGNMVPIVPLMFLLRNEKLKKLMSPILSRAEKKSASLGVGSLEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMPTGLALSAIFTGVVSAGVIMSAITLAGKKGGIAALAALA 192 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig972.21054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig972.21054.1 >prot_F-serratus_M_contig972.21054.1 ID=prot_F-serratus_M_contig972.21054.1|Name=mRNA_F-serratus_M_contig972.21054.1|organism=Fucus serratus male|type=polypeptide|length=332bp MMARNLLTCAIVAVIQLVSVVPSTAFLISPYPTTPHAYVGRATKHARRSFback to top mRNA from alignment at F-serratus_M_contig972:154071..157794+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig972.21054.1 ID=mRNA_F-serratus_M_contig972.21054.1|Name=mRNA_F-serratus_M_contig972.21054.1|organism=Fucus serratus male|type=mRNA|length=3724bp|location=Sequence derived from alignment at F-serratus_M_contig972:154071..157794+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig972:154071..157794+ >mRNA_F-serratus_M_contig972.21054.1 ID=mRNA_F-serratus_M_contig972.21054.1|Name=mRNA_F-serratus_M_contig972.21054.1|organism=Fucus serratus male|type=CDS|length=1992bp|location=Sequence derived from alignment at F-serratus_M_contig972:154071..157794+ (Fucus serratus male)back to top |