mRNA_F-serratus_M_contig97.21035.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5K787_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K787_9PHAE) HSP 1 Score: 246 bits (629), Expect = 1.490e-72 Identity = 130/292 (44.52%), Postives = 178/292 (60.96%), Query Frame = 1 Query: 466 REYIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEED-AEADAESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSIETYYFGEIMHMFPDLKKVCTNLMPDDAQRENT 1338 + Y +WS LL+ ACA R +S S K + + L D M R SP+ DL GTP + P A EA + PQ LI RAA++ G++ P K++D G+S+T AA++ AIKEED A+ E RKS HCVPRFCEL+ ++R+ + S++QL+++ELD K+ G R++ +EIWEA KD VP S ADD +I GAGINPN V QPD +F KF TM D+ KD+ E N +KSGS+ + +SFC S++TYYFG PD+ VC ++PD RE+T Sbjct: 80 KSYNKWSAYLLREACALRRLSGYSRSKYTDKMAAGLTQLDIVMSRSSPYLADLEDKATSGTPPSKPPASSAEAQRVPQDLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRADGRGEGIGQRRKSRHCVPRFCELLMHPQFRERFGA--SRLQLSKKELDAKQKGTTRDIHLEIWEAFKDEKFKVPRSFADDSNIFGAGINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKKSGSNGDMFSFCKESLDTYYFGLTAEKCPDILAVCDQMLPDGTAREST 369
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5JWT0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT0_9PHAE) HSP 1 Score: 251 bits (640), Expect = 1.150e-70 Identity = 133/295 (45.08%), Postives = 183/295 (62.03%), Query Frame = 1 Query: 463 GREYIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEEDAEADAESTPSA---RKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSIETYYFGEIMHMFPDLKKVCTNLMPDDAQRENT 1338 GR Y +W+ LL+ AC R IS S + AL D M+R SP+F+DL GGT + P A EA + PQ LI RAA+ G + P K++D +S+T+AA++ A+KEED + A+++ S RKS HCVPRFCEL+ +++R+ + S+ QL+R+ELD K+TG R++ +E+WEA KD + VP S ADD HI+GAGINPN V QPD TF KF TM ++ KD+ E N +KSGS+ E +SFC S++TYYFG PD+ VC ++PD ENT Sbjct: 560 GRSYDQWAAYLLKEACGLRKISGYSRSSDTTAMAKALTQLDVVMERDSPYFDDLEDRATGGTAPSKPPASAAEAQRVPQHLIAALRAAINAGASPAPTKMYDCGDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFC--ESRTQLSRRELDAKQTGTNRDIHLELWEAFKDESFEVPSSFADDHHIVGAGINPNTVHQPDITFQKFTTMRTELFKDHGEMYSNYKKSGSNAEMYSFCKESLDTYYFGLTTDKCPDILAVCDQMLPDGTASENT 852
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5L890_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L890_9PHAE) HSP 1 Score: 219 bits (558), Expect = 2.280e-60 Identity = 113/246 (45.93%), Postives = 155/246 (63.01%), Query Frame = 1 Query: 604 SPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEED-AEADAESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSIETYYFGEIMHMFPDLKKVCTNLMPDDAQRENT 1338 SP+ DL G +P + P A EA + PQ LI RAA++ G++ P K++D G+S+T AA++ AIKEED A+ E RKS HCVPRFCEL+ ++R+ + S++QL+++ELD K+ G R++ +EIWEA KD VP S ADD +I GA INPN V QPD +F KF TM D+ KD+ E N +KSGS+ E +SFC S++TYYFG PD+ VC ++PD RE+T Sbjct: 353 SPYLADLEDKATGRSPPSKPPASSAEAQRVPQNLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRADGRGEGIGQRRKSKHCVPRFCELLMHPQFRERFGV--SRLQLSKKELDVKQKGTTRDIHLEIWEAFKDEKFKVPSSFADDSNIFGASINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKKSGSNGEMFSFCKESLDTYYFGLTAEKCPDILTVCDQMLPDGTAREST 596
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5J889_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J889_9PHAE) HSP 1 Score: 207 bits (528), Expect = 4.580e-56 Identity = 136/409 (33.25%), Postives = 185/409 (45.23%), Query Frame = 1 Query: 463 GREYIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEEDAEADAESTPSA---RKSIHCVPRFCELIADERYRQMY--------------------------------------------ATIN----------------------------------------------------------------------SKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSIETYYFGEIMHMFPDLKKVCTNLMPDDAQRENT 1338 GR Y +W+ LL+ AC R IS S + AL D M+R SP+F+DL GGT + P A EA + PQ LI RAA+ G + P K++D +S+T+AA++ A+KEED + A+++ S RKS HCVPRFCEL+ +++R+ + A IN S+ QL+R+ELD K+TG R++ +E+WEA KD VP S ADD HI+GAGINPN V QPD TF KF TM ++ KD+ E N +KSGS+ E +SFC S++TYYFG PD+ VC ++PD ENT Sbjct: 200 GRSYDQWAAYLLKEACGLRKISGYSRSSDTTAMAKALTQLDVVMERDSPYFDDLEDRATGGTAPSKPPASAAEAQRVPQHLIAALRAAINAGASPAPTKMYDCGDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFCESRTQLSRRELDAKQTGTNRDIHLELWEAFKDESFEHLIAALRAAINAGASPAPTKMYDCGDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFCESRTQLSRRELDAKQTGTNRDIHLELWEAFKDKIFEVPSSFADDHHIVGAGINPNTVHQPDITFQKFTTMRTELFKDHGEMYSNYKKSGSNAEMYSFCKESLDTYYFGLTTDKCPDILAVCDQMLPDGTASENT 608
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5JVA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA9_9PHAE) HSP 1 Score: 190 bits (483), Expect = 2.740e-50 Identity = 116/293 (39.59%), Postives = 156/293 (53.24%), Query Frame = 1 Query: 466 REYIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEED-AEADAESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFC-GSSIETYYFGEIMHMFPDLKKVCTNLMPDDAQRENT 1338 + Y +WS LL+ ACA R +S S K + + L D M R SP+ DL GGTP + P A EA + PQ LI RAA++ ++ P K++D G+S+T AA++ AIKEED A+ E RKS HC F L+++ELD K+ G R++ +EIWEA KD P S ADD +I GAGINPN V QPD +F KF TM D+ KD+ E N + SGS+ E +SFC G + E Y PD+ VC ++PD R++T Sbjct: 191 KSYNKWSAYLLREACAPRRLSGYSRSKGTDKMAAGLTQHDIVMSRTSPYLADLEDKATGGTPPSKPPASSAEAQRVPQDLITAVRAAIRSELSPEPNKMYDCDGKSYTVAAIMAAIKEEDRADGRGEGIGQRRKSKHCALAF---------------------LSKKELDAKQKGTTRDIHLEIWEAFKDKKFK-PGSFADDSNIFGAGINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKNSGSNGEMFSFCKGLTAEKY---------PDILAVCDQMLPDGTARKST 452
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5K842_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K842_9PHAE) HSP 1 Score: 179 bits (454), Expect = 5.900e-48 Identity = 100/254 (39.37%), Postives = 143/254 (56.30%), Query Frame = 1 Query: 472 YIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEEDAEADAE-STPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFC 1230 Y W ++LLQ A R IS +S E+ VL AL D RPSP++ DL G TP + P+ E + P+ L+ R+A++ G + P K+ DW+ ++ ++ +L I +ED + A +T RKS HCVPR EL+ ER+R+ A S+ QL KR+V E+W+ KD +V V L DD HI A I+PN V QPD +++KF M+++V KDY + N +KSGSHDEW+SFC Sbjct: 168 YSAWPVSLLQIAIQARGISGLSRERSSLVLEKALADVDKVCGRPSPYYADLEDKATGETPASKPLTASPETVEVPEALVMAVRSAIRSGASINPKKMMDWEENAYLASRVLEVIADEDRASGAGVTTAGRRKSKHCVPRAVELMVAERFRERLAA--SRTQLXXXXXXXXXXXNKRSVYFELWKDFKDTDVEVVTHLNDDEHITAAQIDPNIVHQPDISYDKFMNMVKEVNKDYGDCHHNMKKSGSHDEWYSFC 419
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5JJ92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ92_9PHAE) HSP 1 Score: 177 bits (448), Expect = 1.200e-47 Identity = 89/208 (42.79%), Postives = 134/208 (64.42%), Query Frame = 1 Query: 718 RAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEE-DAEADAESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSIETYYFGEIMHMFPDLKKVCTNLMPDDAQRENT 1338 +AA+ +G + PGKL +S+T+AA+L I+E AE +ST S RKS HCVPR CE+IA R +A + QLT+QELD K TG+ R V++++W KD + VP + ADD ++ AGI+PN V QPD +++KF TM D+ KD+ + N +KSGS E + FC ++TYY+G ++ +P++++ T ++PD +RENT Sbjct: 4 KAAMDMGASFEPGKLLPSGKKSYTAAAVLAVIQERAQAEGGDQSTASRRKSRHCVPRLCEVIARPENRARWA--EHRTQLTKQELDAKVTGRTRQVLLDVWNQFKDKGLQVPSTFADDDRVMAAGIDPNVVHQPDISYDKFMTMKNDLVKDHGDMYGNFKKSGSMGEMYEFCKGRLDTYYYGLMVTQYPEIEQATTQMLPDGTERENT 209
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5JHA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA4_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.810e-47 Identity = 96/204 (47.06%), Postives = 131/204 (64.22%), Query Frame = 1 Query: 640 GGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEED-AEADAESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSIET 1248 GGTP + P A EA + PQ LI RAA++ G++ P K++D G+S+T AA++ AIKEED A+ E RKS HCVPRFCEL+ ++R+ + S++QL+++E D K+ G R++ +EIWEA KD VP S ADD +I GAGINPN V QPD +F KF TM D+ KD+ E N +KSGS+ + +SFC T Sbjct: 490 GGTPPSKPPASSAEAQRVPQNLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRADGRGEGIGQRRKSKHCVPRFCELLMHPQFRERFGA--SRLQLSKKEQDAKQKGTTRDIHLEIWEAFKDETFKVPSSFADDSNIFGAGINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKKSGSNGDMFSFCKVEFNT 691
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5K1S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S9_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.530e-40 Identity = 100/292 (34.25%), Postives = 142/292 (48.63%), Query Frame = 1 Query: 466 REYIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALKVGVNDPPGKLHDWQGQSFTSAALLTAIKEED-AEADAESTPSARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGRKSGSHDEWWSFCGSSIETYYFGEIMHMFPDLKKVCTNLMPDDAQRENT 1338 + Y +WS LL+ ACA R +S S K + + L D M R SP+ DL GGTP + P A EA + PQ LI RAA++ G++ P K++D G+S+T AA++ AIKEED A+ E RKS HCVPRFCEL+ ++R+ + S++QL+++ELD K+ G R++ +EIWEA KD V S+ E +SFC ++TYYF PD+ VC ++PD RE+T Sbjct: 159 KSYNKWSAYLLREACALRRLSGYSRSKDTDKMAAGLTQLDIVMSRSSPYLADLEDKATGGTPPSKPPASSAEAQRVPQNLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRADGRGEGIGQRRKSKHCVPRFCELLMHPQFRERFGA--SRLQLSKKELDAKQKGTTRDIHLEIWEAFKDEKFKV----------------------------------------------------SNGEMFSFCKERLDTYYFWLTAEKCPDILAVCDQMLPDGTAREST 396
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 147 bits (370), Expect = 1.940e-35 Identity = 103/323 (31.89%), Postives = 165/323 (51.08%), Query Frame = 1 Query: 442 AAARKAHGREYIRWSLTLLQRACAHRSISKMSTEKRKEVLVDALRAQDNAMKRPSPFFEDLHAIVDGGTPCTVPVAPKEEAGQPPQQLIDVYRAALK-VGVNDPPGKLHDWQGQSFTSAALLTAIKEEDAEADAESTP-----------------------SARKSIHCVPRFCELIADERYRQMYATINSKMQLTRQELDRKETGKKRNVVVEIWEA*KDPNVTVPESLADDMHILGAGINPNFVQQPDCTFNKFCTMIRDVTKDYNERDDNGR-KSGSHDEWWSFCGSSIETYYFGEIMHMFPDLKKVCTNLMPDDAQREN 1335 A+A+KA GR+Y W+ L+R CAHR I +MS +K K LV ALR+ D MKRPSP+F+DL AIV G + EE P + L+ ++R + V + + +G ++ A L A+++E+ +S + RK HC+ R ++ ++ R + INS++Q TRQELD G ++++ E+ + +DP V + DD + + +NPN +QQP+ + K M +N + N + +SG++ W SFC +TY G + +P+L +VC N +P DAQRE+ Sbjct: 37 ASAKKALGRDYPHWATHFLKRTCAHRKIPRMS-QKSKGFLVAALRSLDANMKRPSPYFDDLDAIVAGKSGRGSEQEEGEEGVIPAKALL-MFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPELEDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPL--VINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHV-RKIVDDEQV--SHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQRED 352 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig97.21035.1 >prot_F-serratus_M_contig97.21035.1 ID=prot_F-serratus_M_contig97.21035.1|Name=mRNA_F-serratus_M_contig97.21035.1|organism=Fucus serratus male|type=polypeptide|length=309bp MADGRERLGPAGLSSVSRRQRERRYDRNQQLQRAKVMRALTAAAVVMVCVback to top mRNA from alignment at F-serratus_M_contig97:756808..765149+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig97.21035.1 ID=mRNA_F-serratus_M_contig97.21035.1|Name=mRNA_F-serratus_M_contig97.21035.1|organism=Fucus serratus male|type=mRNA|length=8342bp|location=Sequence derived from alignment at F-serratus_M_contig97:756808..765149+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig97:756808..765149+ >mRNA_F-serratus_M_contig97.21035.1 ID=mRNA_F-serratus_M_contig97.21035.1|Name=mRNA_F-serratus_M_contig97.21035.1|organism=Fucus serratus male|type=CDS|length=1854bp|location=Sequence derived from alignment at F-serratus_M_contig97:756808..765149+ (Fucus serratus male)back to top |