mRNA_F-serratus_M_contig97.21031.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: D7G6C5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C5_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 2.290e-124 Identity = 303/680 (44.56%), Postives = 390/680 (57.35%), Query Frame = 1 Query: 7 LQVWDI-AGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVSKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGA-GPSGSSSQARRGLPMXXXXXXXXXXXXQMVQPSLTVPYEFSPE---LPSGNVHNKAGVGDAHLAMNLPRSYPTPSLGVEAESFTSLSSDNPAKTLESALQASQ--PQDILDLGSSGKVATLDSSEIASSLPSDAGIQGISSALTAFMPVTPGASVDESQVIDKIIPSCAIFDMQ-MIEQLRAEKVFLSNVVEADKVEIMKSEQELRQTSGEVEALKAELHELRTQFQQQQQGTIKLRARVTEAAVERAALLAEISACKASLDAQQGENAFLLREEAMIDGTRDALKNYSVSIQKAKTSSNLDPPNRRPTEEISTSADQFAEQLHVSPLPINSGVHDLESKVEKEIALEPVMPSQTPPPPPLSKDPMPQHIEDPFAEVVGKQDSDNADSNSSAQSGMQQNE-----EKSQSGFDAFPPVGDGFES--DPFAMNGFGEGFSAGNATGGAGVAVVDDPFSATDDVFTNATAAAGDGFDAFPPSATSQFSMDAFGQ 2001 +++WDI AGDP NYLR EDFY AMRLI+MAQASPG PISAERL E T + P ARMQ +PPPPTG+VS+G+A +G + E + DPYAMS QER KYE +FP YDSD DGF+TG E VDLFSKS LPRE IW+L+DADGD KLS+ EFC+GMHLIVCVSKKGL P T P SL G A G + +QA G +V+PS + SP +P G + + A LA++L ++G EAE+ T S P LE + ++Q P + +G + +S S P AG+Q +S+A +A + VT AS SQ S +I M+ ++E L+AEK LS++V+A + +EQ LR E+E L+ EL LR ++Q+QQ T +LRARV V+RA LLAEI AC +S+ Q+ ENAFL + +GT K K S +P +E S+ A + AEQL VSP P E+K + EP+MP++ P P +EDPFAEVV +Q S +A +S G + E E+ QSGFDAFP V D FE+ DPFA++G + G+G AV D PF+ATD VFTNATAAA DGFDAFP + QF DAFGQ Sbjct: 1 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGVPISAERLALERTSSFPLARMQNVPPPPTGSVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDRDGFVTGTEAVDLFSKSRLPRE----IWQLADADGDSKLSLAEFCIGMHLIVCVSKKGLPCPMTRPPSLLPGTRSASGVVTNPAQAHGGS------LATSVPPSPVVRPSPAMRPPSSPPAVMMPLGTAASNSDAFSA-LAVDLATKDLMSTVGSEAEAKTPASEQGPP-ALEPPMTSTQHQPNTAVSRSPTGTHVSDHTSPEGESSP--AGMQELSAASSALLAVTRDASTAHSQAT--AAQSSSIHSMKKLVEILKAEKESLSSIVKAGRATQTDNEQLLRDMGTELENLRHELDCLRNEYQKQQGETAELRARVARTGVDRATLLAEIKACDSSIRTQKEENAFLRQHVLGENGTL-----------KEKDS---EPTTANGEDEGSSLAGKMAEQLEVSPAPE-------EAKPTTDAPPEPMMPAKXXXXXXHGMVPQPTAVEDPFAEVVEEQGSRSAGPSSPNPLGDEPPELNTAVEREQSGFDAFPAVDDAFENGTDPFAVDGL--------SANGSGEAVAD-PFTATDAVFTNATAAA-DGFDAFPAADAQQF--DAFGQ 631
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: D7FK23_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK23_ECTSI) HSP 1 Score: 177 bits (450), Expect = 4.720e-49 Identity = 88/133 (66.17%), Postives = 102/133 (76.69%), Query Frame = 1 Query: 7 LQVWDI-AGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVSKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPRE 402 +++WDI AGDP NYLR EDFY AMRLI+MAQASPG PISAERL E T + P ARMQ +PPPPTG+VS+G+A +G + E + DPYAMS QER KYE +FP YDSD DGF+TG E VDLFSKS LPRE Sbjct: 1 MKIWDISAGDPSLNYLRPEDFYVAMRLIAMAQASPGVPISAERLALERTSSFPLARMQNVPPPPTGSVSQGLALSGGALVAHEPLVGADPYAMSGQERSKYESIFPTYDSDRDGFVTGTEAVDLFSKSRLPRE 133
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A835ZIN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIN7_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.520e-45 Identity = 96/183 (52.46%), Postives = 125/183 (68.31%), Query Frame = 1 Query: 10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAV-SKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGG 555 QVWDIA K+N+L +FY AMRLI+MAQ+ G P++ E+L EGTV +P AR+QG+ PP G + S+G+ +G + DPY M +E KY+ LFP YD DGDGF+TG E V LF+KSGL R L+Q+W+++D+D D +LS EF V MHLIVC+SKKGL VP LP SLA+ G Sbjct: 51 QVWDIADSSKQNFLTRPEFYCAMRLIAMAQS--GAPLTREKLIVEGTVPIPLARLQGVAPPSGGLMYSQGLGPSGPSQ--------DDPYFMLPEELAKYDMLFPSYDPDGDGFVTGAEAVPLFTKSGLDRGVLKQVWDMADSDRDARLSRAEFAVAMHLIVCISKKGLPVPPALPPSLARPG 223
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A0W8DN66_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DN66_PHYNI) HSP 1 Score: 155 bits (393), Expect = 2.370e-38 Identity = 85/199 (42.71%), Postives = 117/199 (58.79%), Query Frame = 1 Query: 10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVS-KGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGAGPSGSSSQARRGL 603 +VW IA +R+ L +FY AMRLISMAQ G+ +SA+R + T+ P M+G+PPP V + + +P YA++ E+ KY+ +F YD+D DGFL G E V LF SGL R LR IW ++D D KLS+ EF V MHLIVCVSK+GL +P+TLPR L++ G+G S + + + G Sbjct: 35 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELSETAFGSGGSAAKNDSSSGF 231
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: W2ZUS1_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZUS1_PHYPR) HSP 1 Score: 154 bits (389), Expect = 2.280e-35 Identity = 88/201 (43.78%), Postives = 118/201 (58.71%), Query Frame = 1 Query: 10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVS-KGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGAGPSGSSSQARRGLPM 609 +VW IA +R+ L +FY AMRLISMAQ G+ +SA+R + T+ P M+G+PPP V + + +P YA++ E+ KY+ +F YD+D DGFL G E V LF SGL R LR IW ++D D KLS+ EF V MHLIVCVSK+GL +P+TLPR L++ G+G GS+ A G M Sbjct: 87 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELSETAFGSG--GSAGMAGLGNQM 283
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A4D9DB77_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB77_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.560e-35 Identity = 79/189 (41.80%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 1 MVLQVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLP--PPP-----TGAVSKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLA 546 ++ +W +A +R++L EDFY A+RLI +AQ G + E++++ T +P+AR +P PPP T + A ++ GD YAMS+++R +Y F D +GDGF+ GP+ V+LFS+SGL R L ++W+L+DAD D +LS EF V MHLIVC+SK+GL VP LP SLA Sbjct: 78 LLKNIWSLADSRQRHFLAREDFYVALRLIGLAQN--GIAPTREKIQETATAPVPYARFSNVPLAPPPLPAPATATPPQDPAXXXXXXXXXSSLE-GDGYAMSSEDRARYLNHFGPCDVNGDGFVDGPQAVELFSRSGLDRSVLGRVWDLADADNDSRLSPGEFAVAMHLIVCISKRGLPVPERLPPSLA 263
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: W2QJ60_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QJ60_PHYPN) HSP 1 Score: 154 bits (389), Expect = 2.870e-35 Identity = 88/201 (43.78%), Postives = 118/201 (58.71%), Query Frame = 1 Query: 10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVS-KGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGAGPSGSSSQARRGLPM 609 +VW IA +R+ L +FY AMRLISMAQ G+ +SA+R + T+ P M+G+PPP V + + +P YA++ E+ KY+ +F YD+D DGFL G E V LF SGL R LR IW ++D D KLS+ EF V MHLIVCVSK+GL +P+TLPR L++ G+G GS+ A G M Sbjct: 87 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELSETAFGSG--GSAGMAGLGNQM 283
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A0W8DPG9_PHYNI (Epidermal growth factor receptor substrate 15 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DPG9_PHYNI) HSP 1 Score: 154 bits (389), Expect = 4.090e-35 Identity = 88/201 (43.78%), Postives = 118/201 (58.71%), Query Frame = 1 Query: 10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVS-KGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKGGDGAGPSGSSSQARRGLPM 609 +VW IA +R+ L +FY AMRLISMAQ G+ +SA+R + T+ P M+G+PPP V + + +P YA++ E+ KY+ +F YD+D DGFL G E V LF SGL R LR IW ++D D KLS+ EF V MHLIVCVSK+GL +P+TLPR L++ G+G GS+ A G M Sbjct: 1403 EVWSIADSQRRSELSRNEFYVAMRLISMAQR--GEQVSAQRFFQLATMQYPLPMMEGVPPPQQQPVQPQAQMHAPQQDFGSVHQQPTGSYALTTDEKSKYDIVFQQYDTDRDGFLMGTEAVALFQMSGLDRNMLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELSETAFGSG--GSAGMAGLGNQM 1599
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A833T268_PHYIN (Cytoskeletal-regulatory complex EF hand n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T268_PHYIN) HSP 1 Score: 153 bits (387), Expect = 5.060e-35 Identity = 91/213 (42.72%), Postives = 118/213 (55.40%), Query Frame = 1 Query: 10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPP------PTGAVSKGIARTGDNAIPLENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAKG--GDGAGPSGSSSQ-----ARRGLPM 609 +VW IA +R+ L +FY AMRLISMAQ G+ +S +R + T+ P M G+PPP P + G +P PYA++ E+ KY +F YD+D DGFL GPE V LF SGL R LR IW ++D D KLS+ EF V MHLIVCVSK+GL +P+TLPR L + G A G S+Q A+ G P+ Sbjct: 87 EVWSIADAQRRSELSRNEFYVAMRLISMAQR--GEQVSVQRFFQMATMQYPLPAMDGVPPPQQQPIQPQAQMHAPQQDFGSVHQQATGSQPTGPYALTTDEKSKYSIVFQQYDTDHDGFLMGPEAVALFQMSGLDRNVLRDIWSMADVTQDSKLSVQEFYVAMHLIVCVSKRGLPMPSTLPRELGETAFGSSAAVPGHSNQMSAPSAQNGFPV 297
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Match: A0A0P1A6M0_PLAHL (Transcription factor n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6M0_PLAHL) HSP 1 Score: 153 bits (386), Expect = 8.290e-35 Identity = 82/185 (44.32%), Postives = 110/185 (59.46%), Query Frame = 1 Query: 10 QVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTVALPFARMQGLPPPPTGAVSKGIARTGDNAIPL-----ENVRPGDPYAMSAQERLKYERLFPVYDSDGDGFLTGPETVDLFSKSGLPREHLRQIWELSDADGDRKLSMPEFCVGMHLIVCVSKKGLGVPATLPRSLAK 549 ++W IA +R+ L +FY AMRLISM Q G+ +S +R + ++ P A M G+PPP + ++ PL + P PYA+SA E+ KY+ +F YD+D DGF+ G E V LF SGL R LR IW ++D D KLS EF V MHLIVCVSK+GL +PATLPR L++ Sbjct: 593 EIWSIADAQQRSELSRNEFYVAMRLISMIQR--GEQVSVQRFSQFAAMSYPLAMMDGMPPPSSIQQQPIQSQESHPIEPLCGSMQQQPTPTGPYALSADEKSKYDNIFQQYDTDRDGFIMGSEAVTLFQMSGLDRIVLRNIWSMADITQDSKLSAQEFYVAMHLIVCVSKRGLPMPATLPRELSE 775 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig97.21031.1 >prot_F-serratus_M_contig97.21031.1 ID=prot_F-serratus_M_contig97.21031.1|Name=mRNA_F-serratus_M_contig97.21031.1|organism=Fucus serratus male|type=polypeptide|length=670bp MVLQVWDIAGDPKRNYLRCEDFYAAMRLISMAQASPGKPISAERLKKEGTback to top mRNA from alignment at F-serratus_M_contig97:695191..699569+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig97.21031.1 ID=mRNA_F-serratus_M_contig97.21031.1|Name=mRNA_F-serratus_M_contig97.21031.1|organism=Fucus serratus male|type=mRNA|length=4379bp|location=Sequence derived from alignment at F-serratus_M_contig97:695191..699569+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig97:695191..699569+ >mRNA_F-serratus_M_contig97.21031.1 ID=mRNA_F-serratus_M_contig97.21031.1|Name=mRNA_F-serratus_M_contig97.21031.1|organism=Fucus serratus male|type=CDS|length=4020bp|location=Sequence derived from alignment at F-serratus_M_contig97:695191..699569+ (Fucus serratus male)back to top |