mRNA_F-serratus_M_contig97.21011.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: D7G6B3_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B3_ECTSI) HSP 1 Score: 353 bits (905), Expect = 1.690e-115 Identity = 172/234 (73.50%), Postives = 193/234 (82.48%), Query Frame = 3 Query: 366 MVFVSRPLVMFIASRAQG---RFLPFGIARRCKAISSTPDGGKSRHEYEVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVVHQENPSVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLCEDAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLGLV 1058 MV VSRPL+ F A+RAQG R FG AR C SS GK +H+++VL RDL YSGWRKIVKK VR + K +VFDVVHQE PSVAVFVWHT + TLTLIKEF+PGRE VAHGVVAG+YEKNKHDSPLQAAK+ELEEEAHL GGTWH+LCED ETTINADKYSSNEF+CWLVVDPYVTPTP+ +DDEE IEI RG++MQ M M+ RGELS+VSSFVVL G RKLRQLGL+ Sbjct: 1 MVSVSRPLLAFAAARAQGTAGRLFSFGTARHCAGFSSPVGEGKPQHDFKVLNRDLAYSGWRKIVKKTVRVEDEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTINADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGELSIVSSFVVLMGARKLRQLGLL 234
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A7S3Y3W4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3W4_HETAK) HSP 1 Score: 181 bits (458), Expect = 9.950e-49 Identity = 86/189 (45.50%), Postives = 124/189 (65.61%), Query Frame = 3 Query: 498 YEVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVVHQE-NPSVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLCEDAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLGLVS 1061 +++L + YS WRKI++++V FD+VH + S+ VF W T ++T TL++EF PG + HGV AG+YE NKH SPL+AA+ ELEEEAHL+GGTW ++ ++ +T I DKY++N C+LV+DP P PRALD EE IEI G T M ++ G ++++SS+ L KLR LGL++ Sbjct: 86 FKILAERVAYSRWRKIIERDVELPNGTQCSFDIVHNDLEGSIVVFAWDTRAQTATLVREFQPGPMRLLHGVAAGMYEPNKHGSPLEAARMELEEEAHLTGGTWINMMDEGQT-ITVDKYNTNRVHCFLVLDPTPAPNPRALDAEEHIEIRPGATRGDIMGLITSGNMNIMSSYTCLLAFEKLRTLGLLN 273
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A6U2S3A3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S3A3_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.850e-37 Identity = 73/190 (38.42%), Postives = 114/190 (60.00%), Query Frame = 3 Query: 489 RHEYEVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVVHQENP-SVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHD-SPLQAAKFELEEEAHLSGGTWHSLCEDAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLG 1052 + ++ ++ ++VYS WRKI+++ V+F + FD+V Q+ +V +F W + +KT TL++E++PG HGV AG+ E++KH P AA+ ELEEE HL GG W+ L D T+ DKY E +LV+DP PR LD EE IEI G+++ M+ G +++V + + + KLR+LG Sbjct: 36 QQQHRIISDEVVYSRWRKIIRRVVQFPAGNTVDFDIVDQKGTGAVTIFAWCSKTKTATLVREYNPGCHKSLHGVAAGLIEEDKHQCDPEIAARHELEEECHLQGGRWYRLTADG-ATVPMDKYVVTEIAAYLVIDPETVSNPRPLDAEEDIEIISGVSVPEIFDMIRSGGMNLVGGWACMLAIEKLRELG 224
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A0G4H3V0_VITBC (Nudix hydrolase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H3V0_VITBC) HSP 1 Score: 145 bits (366), Expect = 2.890e-36 Identity = 69/188 (36.70%), Postives = 106/188 (56.38%), Query Frame = 3 Query: 489 RHEYEVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVVHQENPSVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLCEDAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLG 1052 R ++V+G +VY GW+ ++ + + K+ +D+ H + P+V V W T KT +E+ PG G VAG+YE+ KH+SPL AAK ELEEEAHL GG W +L + ++ +KYS F+ +L +DP T PR LDD E I + R + + + G ++ +S L + KLR++G Sbjct: 34 REPFKVIGEQMVYQGWKNVMHRTIELPNGKTTRYDINHSDCPAVFVVPWDTQKKTTIFAEEYYPGPNQWKKGFVAGLYERKKHESPLHAAKLELEEEAHLVGGKWINLINE-RGVMDYEKYSDQIFYAFLCLDPVHTDDPRPLDDSEVIYLHRDVPAKAVLEGALHGHFTVTTSLAALLAIEKLREIG 220
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A7S1ZSI2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSI2_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.970e-36 Identity = 76/196 (38.78%), Postives = 114/196 (58.16%), Query Frame = 3 Query: 495 EYEVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVVHQENP-SVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYE---KNKHDSPLQAAKFELEEEAHLSGGTWHSLCEDAE------TTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLG 1052 EYE+L ++V+ WR I+ + VR +DVV Q+ +V +FVW++ +KT TL++E++PG + +GV AG+ E K+ H P QAA ELEEE HLSGGTWH L + T++ DKY+ +LV+D P+ DDEE IEI R +T+ + ++ GE+++V + L + KLR LG Sbjct: 97 EYELLKEEVVFQRWRSILSRVVRMPNGNVVDYDVVDQKGVGAVVIFVWNSQTKTATLVREYNPGCHRILYGVAAGLIEDDAKHSHGDPKQAAIMELEEECHLSGGTWHCLTTPSSSSSSLPTSVPMDKYAVTNITPYLVIDASHVTNPKPCDDEEDIEIVRNVTIDEVLRLIRSGEMNLVGGWACLLAIEKLRDLG 292
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A1E7ER69_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER69_9STRA) HSP 1 Score: 142 bits (357), Expect = 5.680e-35 Identity = 76/194 (39.18%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 483 KSRHEYEVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVVHQE--NPSVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEK--NKHDSPLQAAKFELEEEAHLSGGTWHSLCEDAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLG 1052 ++++ +E++ VYSGWR IV++ VR NK FD+V + + +V +F W T SKT TLI+E+ P + G+ AG+ E+ + H++ L AA+ ELEEE HL G W L DKYS+ C+LV+DP P+ALD+EE IEI G+T+ + ++ GE+++V F L + KLR+LG Sbjct: 43 ENKNNFEIIDEKTVYSGWRTIVQRKVRMRNNKVVDFDLVGVKTGDSAVLIFAWDTKSKTATLIREYMPASNRILWGLAAGLVEEKHDNHNTEL-AARHELEEECHLKNGKWIPLLHQPTAM---DKYSTTTIQCYLVLDPEKEDNPKALDEEEDIEIIPGVTIPEILRWVNNGEMNLVGGFGCLLAIEKLRELG 232
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A482S980_9ARCH (NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S980_9ARCH) HSP 1 Score: 134 bits (337), Expect = 5.020e-33 Identity = 68/156 (43.59%), Postives = 100/156 (64.10%), Query Frame = 3 Query: 588 FDVVHQENPSVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLCEDAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLGL 1055 +D++ Q++ SV VFVW TAS T TL+KE+ PG V G VAG+ E KH S LQAA+ ELEEEAHL W+SL + + DKYS+N F +L +D + + LDDEE I I R +T M ++ G++++VS++ ++ G++KL+ LG+ Sbjct: 10 YDIITQKHLSVVVFVWDTASATTTLVKEYHPGPNKVMLGAVAGMCENEKHTSILQAAQHELEEEAHLRTDHWYSLLNEG-AIMPFDKYSNNRFIPYLALDCEPVKSAKPLDDEEYITIHRNVTYNEMMELMASGQINVVSTYTIMLGLKKLKDLGI 164
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A4D9D3K8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3K8_9STRA) HSP 1 Score: 138 bits (347), Expect = 5.970e-32 Identity = 79/203 (38.92%), Postives = 118/203 (58.13%), Query Frame = 3 Query: 462 SSTPDGGKSRHEYEVLGRDLVYSG-WRKIVKKNVRFDGNKSFVFDVVHQENPSVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLCE-DAETTINADKYSSNEFFCWLVVDPY--VTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLGLV 1058 S TP G + ++ +L +Y G WR +++++V++ + FDV+ Q SV VF+W++ S T TLI+E++PG V VAG E KH+ P AA ELEEEAHL GGTW +L E + E + ADKYS+ F +LVVDP V R DDEE + + R +T+ ++ RG++++ + L + KLR L L+ Sbjct: 69 SITP--GLAPQDFTLLKEKDLYRGKWRSLLQRDVQYPDGRQVTFDVMDQPGSSVLVFIWNSTSHTTTLIEEYAPGSLQVIFTPVAGGCEDEKHEDPQHAAVLELEEEAHLKGGTWFNLLEGEGEEGVAADKYSTCPFHFYLVVDPVREVEKNARKRDDEELLVVHREVTLVEVRRLIRRGKMTVPGACASLLAMEKLRALKLL 269
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A5J4YLI7_PORPP (Nudix hydrolase domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLI7_PORPP) HSP 1 Score: 110 bits (274), Expect = 1.910e-23 Identity = 70/223 (31.39%), Postives = 114/223 (51.12%), Query Frame = 3 Query: 399 IASRAQGRFLPFGIARRCKAISSTPDGGKSRHEYEVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVVHQENP---SVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLCEDAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLGLV 1058 + RAQ P + C A S+ G + + + + Y ++ I ++ V + + FDV SV VF +++A+KT LI+E+ PG + +G VAG ++ H AA+ EL EEAHL+GGT L A + DKYS + F +L +D ++ PR D+EE I+I R + + A+ M+ RGE ++ S+ + L +LR+ L+ Sbjct: 35 VCDRAQLTLNPLRASWMCSAASA----GSEQDGFTLKSEAVRYERYKTIYERVVTYPDGAEYSFDVEGSPRANFSSVLVFPFNSAAKTTVLIREYHPGLHALRYGFVAGFFDAKVHADEEAAARAELSEEAHLTGGTMQLLNSGAP--VPRDKYSLDYFHMFLALDAHLDLRPRERDEEERIDIVRDVPVTEAIDMVFRGEFNLSSATLCLMAAERLRKDSLL 251
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Match: A0A7S2ZFG6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFG6_9RHOD) HSP 1 Score: 106 bits (265), Expect = 2.130e-22 Identity = 63/193 (32.64%), Postives = 105/193 (54.40%), Query Frame = 3 Query: 495 EYEVLGRDLVYSGWRKIVKKNVRFDGNKSFVFDVV---HQENPSVAVFVWHTASKTLTLIKEFSPGREMVAHGVVAGVYEKNKHDSPLQAAKFELEEEAHLSGGTWHSLCEDAETTINADKYSSNEFFCWLVVDPYVTPTPRALDDEESIEIERGITMQRAMSMLDRGELSMVSSFVVLAGVRKLRQLGLVSP 1064 ++ +L + + ++ + ++ +R+ K FDV + SV VF + T +KT+TL++E+ PG V G AG ++ KH S AA+ EL EEA L+GG++ + E ++ DKYS N F +LV++P P D+EE I+I +G+T+ R +L +G +++ S F G R L L +P Sbjct: 39 KFSILDEKVSFQRYQTVYERLIRYPNGKRVSFDVFGNPRSDFKSVFVFPYDTRTKTVTLLREYIPGINEVMWGFPAGGFDPKKHKSLEDAARSELSEEAFLTGGSYFPMLESGG--VSQDKYSKNMFHMFLVLNPVEDENPLPRDEEEYIQIVKGVTLPRLQKILAQGGMNLPSGF---CGYRALDALSNPTP 226 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig97.21011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig97.21011.1 >prot_F-serratus_M_contig97.21011.1 ID=prot_F-serratus_M_contig97.21011.1|Name=mRNA_F-serratus_M_contig97.21011.1|organism=Fucus serratus male|type=polypeptide|length=236bp MVFVSRPLVMFIASRAQGRFLPFGIARRCKAISSTPDGGKSRHEYEVLGRback to top mRNA from alignment at F-serratus_M_contig97:223130..232237- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig97.21011.1 ID=mRNA_F-serratus_M_contig97.21011.1|Name=mRNA_F-serratus_M_contig97.21011.1|organism=Fucus serratus male|type=mRNA|length=9108bp|location=Sequence derived from alignment at F-serratus_M_contig97:223130..232237- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig97:223130..232237- >mRNA_F-serratus_M_contig97.21011.1 ID=mRNA_F-serratus_M_contig97.21011.1|Name=mRNA_F-serratus_M_contig97.21011.1|organism=Fucus serratus male|type=CDS|length=1416bp|location=Sequence derived from alignment at F-serratus_M_contig97:223130..232237- (Fucus serratus male)back to top |