prot_F-serratus_M_contig1283.2099.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1283.2099.1
Unique Nameprot_F-serratus_M_contig1283.2099.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length161
Homology
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: D8LHE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE0_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 7.000e-37
Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = 0
Query:   45 IVENNRKTEMCRNWDKGIC-RYGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRCYPCMTWVATGSCPYASRCVFIHDPRVRGPIEAYLYARGHARSPSSAYPSSDSS------FFFPDVPR 161
            +V  NRKTE+CRNW +G C     +CAFAHG  EL+ ++L +M+  GRIP+A+K+RCYPC+TW+ TG+CPY SRCVFIHDPR+RGP  AYLY     RS S+    S  S      F++PD+PR
Sbjct:    8 LVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDQMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLYKHNGNRSHSTRSGGSVGSPLGRDIFYWPDMPR 131          
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: D7FIR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR3_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 5.720e-31
Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 0
Query:   44 TIVENNRKTEMCRNWDKGICRYGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRCYPCMTWVATGSCPYASRCVFIHDPRVRGPIEAYLYARGHARSPSSAYPSSDSS 153
            +I+E+NRKTE+CRN++ G C +G+RCAFAHG+ ++K++TLR+++  GRI DA+KY+   C TWVATG+C Y  RCVFIHD RV+G I         A+S +S   SS  S
Sbjct:   32 SIIEHNRKTELCRNYENGSCTFGDRCAFAHGLDDIKHKTLRDLEKEGRIADASKYQACLCQTWVATGTCLYGRRCVFIHDDRVKGTIGLSPRTSTLAKSAASRISSSTGS 141          
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: A0A836CEW5_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW5_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.900e-28
Identity = 47/72 (65.28%), Postives = 56/72 (77.78%), Query Frame = 0
Query:   45 IVENNRKTEMCRNWDKGICRYGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRCYPCM--TWVATGSCPY 114
            ++E NRKTE+CRNW  G C YG +CAFAHG  EL  +TL EM+ AGRIP+AA++R  PCM  TWVATGSCPY
Sbjct:    4 VIEANRKTELCRNWQNGTCLYGGKCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPY 75          
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: A0A7S2RNI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RNI6_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.150e-19
Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 0
Query:   51 KTEMCRNW--DKGICRYGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRCYPCMTWVATGSCPYASRCVFIHDPRVRGPIEAYL 134
            KTE+CR++  +KG C +G++C +AHG  ELKY  L ++  AG I D   YR +PC TW+ATG+CP+ SRC  +HDPR+RG  +++L
Sbjct:   73 KTELCRHYATEKG-CPFGDKCNYAHGEHELKYTKLMDLDRAGLI-DIEIYRTHPCPTWIATGACPFDSRCSGLHDPRIRGNSKSWL 156          
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: D7FXU2_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU2_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 2.450e-18
Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = 0
Query:  104 MTWVATGSCPYASRCVFIHDPRVRGPIEAYLYARGHARSPSSAYPSSDSSFFFPDVPR 161
            MTWVATGSCPY+SRCVFIHDPRV+G  EA+LYA  H    SSAY SSDS+FFFPD+PR
Sbjct:    1 MTWVATGSCPYSSRCVFIHDPRVQGRQEAWLYAGSHM---SSAYHSSDSAFFFPDLPR 55          
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: A0A7S3Q9Y3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9Y3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.690e-17
Identity = 37/77 (48.05%), Postives = 58/77 (75.32%), Query Frame = 0
Query:   51 KTEMCRNWD-KGICRYGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRCYPCMTWVATGSCPYASRCVFIHDPRV 126
            KTE+CRN++ +  C++G++C +AHG  ELK   L +++ AG + D   +R +PC+TWVATG+CP+ +RC+ +HDPRV
Sbjct:  423 KTELCRNFNTRRGCQFGDKCNYAHGAQELKLTKLMDLERAGLV-DIEIFRTHPCLTWVATGACPFDTRCIGLHDPRV 498          
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: A0A7S2XMC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMC7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.240e-16
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   51 KTEMCRNWDKG-ICRYGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRCYPCMTWVATGSCPYASRCVFIHDPRVRGPIEAYL 134
            KT +C  +  G  C +   C +AHG  ELKY  L  M+NAG + D   +R +PC+TW+ATG+CP+ S+C  +HDPR  G I  +L
Sbjct:  309 KTVLCNYYKTGKACPFRSECLYAHGDDELKYTKLMAMENAGLV-DVETFRTHPCLTWIATGACPFDSKCELLHDPRAAGSIPPWL 392          
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: A0A7S4STT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4STT9_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.310e-11
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
Query:   65 YGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRCYPCMTWVATGSCPYASRCVF 120
            +G +C +AHG+ ELKY  L +M+ AG + D   YR +PC  WV++G CP+  +C F
Sbjct:    1 FGSKCNYAHGIDELKYTKLIDMERAGLVDDVKTYRTHPCFLWVSSGCCPFGQQCSF 56          
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: A0A1R2AZQ6_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AZQ6_9CILI)

HSP 1 Score: 57.4 bits (137), Expect = 9.930e-8
Identity = 25/91 (27.47%), Postives = 44/91 (48.35%), Query Frame = 0
Query:   44 TIVENNRKTEMCRNWDKGICRYGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRCYPCMTWVATGSCPYASRCVFIHDPRVRGPIEAYL 134
            +   N  KTE+C+NW  G C++G+ C FAHG  E K   +++ Q              PC+++     C Y  +C + HD  ++  +  ++
Sbjct:   27 SFQNNKYKTEICKNWIAGQCKFGQHCIFAHGTEEKKIVIIQKTQ--------------PCISFTKEHYCSYGDKCQYKHDQGIKKRLPIFV 103          
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Match: A0A7S4MR33_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MR33_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.020e-7
Identity = 30/85 (35.29%), Postives = 44/85 (51.76%), Query Frame = 0
Query:   51 KTEMCRNWDKGI-CRYGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRCYPCMTWVATGSCPYASRCVFIHDPRVRGPIEAYL 134
            KTE+C  + KG  C +G+RC +AHG  EL+++ L +M+ AG I D   YR +P                  +HDPR  G  + +L
Sbjct:   72 KTELCLYFSKGEDCPFGDRCNYAHGYEELRFKKLIDMERAGLIEDVDTYRTHPXXXXXXXXXXXXXXXXXSVHDPRCAGADKCWL 156          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1283.2099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHE0_ECTSI7.000e-3754.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FIR3_ECTSI5.720e-3151.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CEW5_9STRA4.900e-2865.28C3H1-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2RNI6_9STRA1.150e-1950.00Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
D7FXU2_ECTSI2.450e-1875.86C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S3Q9Y3_9STRA2.690e-1748.05Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2XMC7_9STRA1.240e-1644.71Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S4STT9_9STRA1.310e-1144.64Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A1R2AZQ6_9CILI9.930e-827.47Uncharacterized protein n=2 Tax=Stentor coeruleus ... [more]
A0A7S4MR33_9STRA2.020e-735.29Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 49..75
e-value: 4.2E-8
score: 42.9
coord: 97..124
e-value: 8.6E-4
score: 28.6
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 102..124
e-value: 6.0E-6
score: 26.0
coord: 51..75
e-value: 1.3E-8
score: 34.5
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 102..125
score: 10.878
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 49..76
score: 15.76
NoneNo IPR availableGENE3D4.10.1000.10coord: 94..126
e-value: 7.9E-7
score: 30.4
coord: 43..81
e-value: 2.8E-13
score: 51.1
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 29..140
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 4..42
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 49..80
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 95..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1283contigF-serratus_M_contig1283:258756..267738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1283.2099.1mRNA_F-serratus_M_contig1283.2099.1Fucus serratus malemRNAF-serratus_M_contig1283 258710..267738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1283.2099.1 ID=prot_F-serratus_M_contig1283.2099.1|Name=mRNA_F-serratus_M_contig1283.2099.1|organism=Fucus serratus male|type=polypeptide|length=161bp
MSWPTQQPQQQQQHQQQYHQVLATPPPPPPSPRPQTPPSRRIHTIVENNR
KTEMCRNWDKGICRYGERCAFAHGMGELKYRTLREMQNAGRIPDAAKYRC
YPCMTWVATGSCPYASRCVFIHDPRVRGPIEAYLYARGHARSPSSAYPSS
DSSFFFPDVPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf