mRNA_F-serratus_M_contig967.20994.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D7FX04_ECTSI (Dopamine beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI) HSP 1 Score: 196 bits (499), Expect = 1.300e-52 Identity = 130/305 (42.62%), Postives = 163/305 (53.44%), Query Frame = 2 Query: 113 QFHVCPFVLRQRMDK-------GXXXXXXXXXXXXXCPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKEL-------RVLEARGRGLLEITTLVSGNHRKTNNPRA 985 +FHVCP + R+RM CPG+A+++ Q TGVCYFNMR + G V+QRSYNA AVRV + P P A +L GS D G G + VVPA ++ EG LC+EMRIRLY GAMSKLL+RL KD+ N VQLQGPF++ L P PAHRNV+MIAAGTGINPM+Q IR+Y + A + RSR+AL+ Q TS +DLY +E+ R+ EA+ GLLE+T L+SG HRK N P A Sbjct: 715 RFHVCPLLFRERMGATSAVGRGNLPTTRPVYRYIFLCPGQAQVLPQNITGVCYFNMRA-QEKGNGVIQRSYNAYAVRVRDTN-------PTP------------------------------TAGGMLMGGLSHGS---DKGA------GTLIVVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAA--QSSRSRLALVWQATSEADLYGSEEMTELQYDRRLCEAKSNGLLEVTVLISGEHRKRNIPGA 970
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 196 bits (499), Expect = 1.450e-52 Identity = 130/298 (43.62%), Postives = 167/298 (56.04%), Query Frame = 2 Query: 113 QFHVCPFVLRQRMDK-------GXXXXXXXXXXXXXCPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNPRA 985 +FHVCP + R+RM CPG+A+++ TGVCYFNMR + G+ V+QRSYNA AVRV + + PAV GG L GG L + G+G + +VVPA ++ EG LC+EMRIRLY GAMSKLL+RL KD+ N VQLQGPF++ L P PAHRNV+MIAAGTGINPM+Q IR+Y + A + RSR+AL+ Q TS +DLY +E+ L+A+ GLLE+T L+SG HRK N P A Sbjct: 1407 RFHVCPLLFRERMGATSAVGRGNLPTTRPVYRYIFLCPGQAQVLN--ITGVCYFNMRA-QEKGKGVIQRSYNAYAVRVRDTNPT-----------PAV---------GGM-----LMGG--------LSHGGDKGAGTL-------------KVVPASQTTEGVLCIEMRIRLYHDGAMSKLLERLAKDTDNPAVQLQGPFVIQKLVPPPAHRNVVMIAAGTGINPMVQQIRDYLALPRVAA--QSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGA 1653
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 177 bits (448), Expect = 8.250e-46 Identity = 118/331 (35.65%), Postives = 164/331 (49.55%), Query Frame = 2 Query: 26 VQTSLVPVAAAAFLENIQKRKERKRFVFRQFHVCPFVLRQRMDKGXXXXXXXXXXXXX-------CPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRF----DASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNPRA 985 V T VPV + KR + + ++FHVCP + R++M CPG+A+ + + GVC+F+M + G+ V+QR+YNA AVRV F D SG + P RVVPA E+ EG LC+EMRIRLY GAMS+LL++L KD+ N +QLQGPF++ L P PAHRNV+MIAAGTG+NPM+Q IR+Y + A T RSR+ L+ Q S ++LY +E+ ++A+ +GLLE+ LVSG+ R+ N P A Sbjct: 899 VTTFGVPVVSPGAGPAALKRTWSSKKLLQRFHVCPLLFREKMGTDSPIGRGLLFTKRPTYRYIFSCPGQAQALVETIHGVCHFHMPG-QVPGKGVIQRAYNAYAVRVQGFVDGKDGSGKGATPP-------------------------------------------------------------RVVPAQETSEGVLCIEMRIRLYHDGAMSQLLEKLSKDTDNPAIQLQGPFIITKLVPPPAHRNVVMIAAGTGVNPMVQQIRDYLALPRDQAHST--RSRLCLIWQSMSEAELYGSEEITEMQAKSKGLLEVIVLVSGDQRRRNVPGA 1165
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D8LFE6_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 163 bits (412), Expect = 5.280e-41 Identity = 115/298 (38.59%), Postives = 153/298 (51.34%), Query Frame = 2 Query: 113 QFHVCPFVLRQRMD------KGXXXXXXXXXXXXX-CPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSVSDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNPRA 985 +FHVCP + R+RM +G CPG+A+++ VVQRSYNA AVRV D +G ++PG A+ GG L + G G + +VVPA E++ G LC+EMRIRLY GAMSKLL+ L KDS N TV+LQ PF++ L P PAHRNV+MIAAGTGINPM+Q IR+Y + A + +SR+AL+ Q TS +DL+ E+ ++ + GLLE+ L+SG HRK N P A Sbjct: 1186 RFHVCPLLFRERMGAVSSFGRGYLPTSRPVYRYIFLCPGQAQILG--------------------VVQRSYNAYAVRV--QDTNGS-----------LTPG-------------AIMGG--------LSQGSDKGQGTL-------------KVVPAGETKAGVLCIEMRIRLYTDGAMSKLLENLAKDSDNPTVRLQAPFVIQKLVPPPAHRNVMMIAAGTGINPMVQQIRDYLALPKSGA--QSSKSRLALVWQATSEADLFGADEIAAMQEKSDGLLEVVMLISGQHRKRNIPGA 1414
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 139 bits (349), Expect = 1.130e-32 Identity = 93/226 (41.15%), Postives = 113/226 (50.00%), Query Frame = 2 Query: 113 QFHVCPFVLRQRMDKGXXXXXXXXXXXXX-------CPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINP 769 +F VCP + R+RM CP +A+ AQA +GVCYFNMR + G+ VVQR YNA AVR++ EPP PGG A + T +VVPA E+ EG LC+EMRIR+Y GAMSKLL++L KD+ N VQLQGPFLV+ L P PAHRNVIMIAAGTG+NP Sbjct: 1090 RFQVCPLLFRERMGAASAVGRGHLPSKRPVYRYIFSCPAKAQAQAQAVSGVCYFNMRA-QEEGKGVVQRPYNAFAVRLLDV---------EPP----------------------TPGGRVAWSK---------------------TSAKLPKVVPAEETTEGVLCIEMRIRMYHDGAMSKLLEKLSKDTDNVAVQLQGPFLVNKLAPPPAHRNVIMIAAGTGVNP 1262
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 135 bits (339), Expect = 2.360e-31 Identity = 90/229 (39.30%), Postives = 115/229 (50.22%), Query Frame = 2 Query: 104 VFRQFHVCPFVLRQRMDKGXXXXXXXXXXXXX-------CPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINP 769 +F +F VCP + R+RM CP + AQA +GVCYFNMR + G+ VVQR+YNA AVR++ EPP +PG G A LP ++VPA E+ EG LC+EMRIR+Y GAMSKLL++L +D+ NA VQLQGPFL++ L P P +RNVIMIAAGTG+NP Sbjct: 1093 LFERFQVCPLLFRERMGAASAVGRGHLPSKRPVYRYIFSCPANGQAQAQAVSGVCYFNMRA-QEEGKGVVQRAYNAFAVRLLDV---------EPP-----TPGGRVAWTKGFAK---LP-----------------------------------KIVPAGETTEGILCIEMRIRMYHDGAMSKLLEKLSQDTDNAAVQLQGPFLINKLAPPPVYRNVIMIAAGTGVNP 1268
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: A0A6H5KC42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC42_9PHAE) HSP 1 Score: 103 bits (258), Expect = 8.650e-21 Identity = 99/328 (30.18%), Postives = 139/328 (42.38%), Query Frame = 2 Query: 80 KRKERKRFVFRQFHVCPFVLRQRMDKGXXXXXXXXXXXXXCPGEAEMVAQAATGVCYFNMRVVRSNGESVVQRSYNATAVRVI----------RFDASGGASLPEPP---RAPAVSPGDAAR--------AEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRL------YKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQFIRNYQSFESQDALRTTGRSRIALLHQVTSV-SDLYCDKELRVLEARGRGLLEITTLVSGNHRKTNNP 979 +R R R FHVCP +L +++ G CPG A + + GVC+F MR+ + G +VV+R+YNA AVRV+ ++S G E + G AR A GH ST + + + S ++ I + DG + + E ++ V IR + G + LD N VQLQGPFL L P PAHRNV+MIAAGTG+NP + SV +DLYC EL L+A+ GLLE+T L+SG++ + N P Sbjct: 393 RRVARTRNPLHLFHVCPLLLHEKLCDGGGRPVHKFVFA--CPGTAAALVGSMEGVCHFKMRLTQEAGMTVVERAYNAFAVRVLDEEGKRRVVPALESSEGVLCVEMRIRLYPDGLMSGLLARLIKVVPTVAITGHCSTHK-------NHKLFISASNKLSRSPIGDRPTNRSTDGSTYALDRLFWEERSIRVSPTIRAPCSCCGWVRGGGHQNLD-------NPAVQLQGPFLQHRLTPPPAHRNVVMIAAGTGVNPS----------------------------ECNSVEADLYCTDELTALQAKANGLLEVTALISGDNTRRNVP 676
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D8LN38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN38_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 3.000e-15 Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 2 Query: 596 MRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGINPMIQ 778 M IR+Y GAMSKLL++L +D+ N TVQLQ PFL++ L P PAHR VIMIAAGT +NP Q Sbjct: 1 MHIRMYHDGAMSKLLEKLSEDADNPTVQLQVPFLIEKLAPRPAHRKVIMIAAGTAVNPSKQ 61
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: A0A6H5K906_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K906_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 6.030e-15 Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 524 VTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPK-------DSANATVQLQGPFLVDSLRPCPAHRNVIMIAAGTGIN 766 V + GK RVVPA+ES EG LCVEMRIRLY G M+ LL +L + + N+ VQLQG FL L P PAHRN +MIAAGTG N Sbjct: 59 VLDEKGKRRVVPALESSEGVLCVEMRIRLYPDGLMNGLLAQLIRVRGIGHQNLDNSAVQLQGAFLRHWLTPSPAHRNAVMIAAGTGPN 146
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Match: D8LB74_ECTSI (Delta-9 desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB74_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 2.260e-11 Identity = 65/228 (28.51%), Postives = 86/228 (37.72%), Query Frame = 2 Query: 74 IQKRKERKRFVFRQFHVCPFVLRQRMDKGXXXXXXXXXXXXXCPGEAEMVAQAATGVCYFNMRVVRSNG---------------ESVVQRSYNATAVRVIRFDASGGASLPEPPRAPAVSPGDAARAEGGHASTIALPGGDPADAPVVLEDSFEVGSGIIDSGTEVTTKDGKVRVVPAVESREGNLCVEMRIRLYKYGAMSKLLDRLPKDSANATVQLQGPFLVDSLR 712 I +R R R FHVCP +L +++ G CPG A + + GVC+FNMR+ + G ++VVQR+YNA AVRV+ ++GK RVVP++ES EG LCVEMRIRLY G MS LL L K AN +++ D R Sbjct: 647 IPRRVARTRNPLHSFHVCPLLLHEKLCDGGGRPVHKFVFA--CPGTAAALVGSMEGVCHFNMRLAQEAGMRLPRYRQKPVYVARQTVVQRAYNAFAVRVL-------------------------------------------------------------------DEEGKRRVVPSLESSEGVLCVEMRIRLYPDGLMSGLLAHLIKAKANGLLEVTALISGDHTR 805 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig967.20994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig967.20994.1 >prot_F-serratus_M_contig967.20994.1 ID=prot_F-serratus_M_contig967.20994.1|Name=mRNA_F-serratus_M_contig967.20994.1|organism=Fucus serratus male|type=polypeptide|length=328bp MNPVQTSLVPVAAAAFLENIQKRKERKRFVFRQFHVCPFVLRQRMDKGKEback to top mRNA from alignment at F-serratus_M_contig967:312207..316498+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig967.20994.1 ID=mRNA_F-serratus_M_contig967.20994.1|Name=mRNA_F-serratus_M_contig967.20994.1|organism=Fucus serratus male|type=mRNA|length=4292bp|location=Sequence derived from alignment at F-serratus_M_contig967:312207..316498+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig967:312207..316498+ >mRNA_F-serratus_M_contig967.20994.1 ID=mRNA_F-serratus_M_contig967.20994.1|Name=mRNA_F-serratus_M_contig967.20994.1|organism=Fucus serratus male|type=CDS|length=1968bp|location=Sequence derived from alignment at F-serratus_M_contig967:312207..316498+ (Fucus serratus male)back to top |