mRNA_F-serratus_M_contig965.20973.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: D8LJL9_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL9_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.120e-40 Identity = 85/146 (58.22%), Postives = 114/146 (78.08%), Query Frame = 3 Query: 861 EERLKLNRERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLGVSFLELVDPNDSQEVLRSVLATLRRGGIRQVQYRMRPPAGAHAAEVETSFRLVSTRLVAVTRVRG 1298 +++ + +RE+NRDHSRRSR+RKKA +EGLK+ +LG YRMLVE+AHD+IS HS D +A F ASG F R LG +PT++LG S L+LV+ D Q V+++++ TL RGGI+QVQYRMRPP+ A EVETSFR+ S RL+A+TR+ G Sbjct: 355 DDKTRRSREKNRDHSRRSRQRKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGASLLDLVETKDVQAVVQAIMDTLSRGGIKQVQYRMRPPSDGDAVEVETSFRMASRRLLAITRIVG 500
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: A0A6H5KYK0_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK0_9PHAE) HSP 1 Score: 167 bits (422), Expect = 7.990e-40 Identity = 88/156 (56.41%), Postives = 115/156 (73.72%), Query Frame = 3 Query: 861 EERLKLNRERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLGVSFLELVDPNDSQEVLRSVLATLRRGGIRQ----------VQYRMRPPAGAHAAEVETSFRLVSTRLVAVTRVRG 1298 +++ + NRE+NRDHSRRSRERKKA +EGLK+ +LG YRMLVE+AHD+IS HS D +A F ASG F R LG +PT++LG S L+LV+P D Q V+++++ TL RGGI+Q VQYRMRPP+ A EVETSFR+ S RL+A+TR+ G Sbjct: 393 DDKARRNREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGTSLLDLVEPKDVQAVVQAIMDTLSRGGIKQASFMHSVPKLVQYRMRPPSDGDAVEVETSFRMASRRLLAITRIVG 548
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: A0A6H5KZ44_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ44_9PHAE) HSP 1 Score: 146 bits (368), Expect = 8.600e-35 Identity = 88/158 (55.70%), Postives = 109/158 (68.99%), Query Frame = 3 Query: 828 PSEESLRDLTPEERLKLNRERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLGVSFLELVDPNDSQEVLRSVLATLRRGGIRQVQ-YRMRPPAGAHAAEVETSFRLVSTRLVAVTRVRG 1298 P E + LTPEERL+ NR RNRDHSRRSR+RKKA VEG+K QV+ELGAYRMLVE+AHDLISAH+TD VF +AS F R LG+ +LLGV + LV P+D+ V ++ L + QV YR+R VE+SFR+V T+LVA+TRV G Sbjct: 167 PPEVDNKLLTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRALGIRTEDLLGVQLIHLVHPDDAGRVTEALRRALLCNQVTQVVVYRLRHQQQEFT--VESSFRVVPTKLVAITRVGG 322
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: D7G032_ECTSI (Multi-sensor hybrid histidine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G032_ECTSI) HSP 1 Score: 104 bits (259), Expect = 1.270e-22 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 3 Query: 945 LKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLGVSFLELVDPNDSQEVLRSVLATLRRGGIRQVQ-YRMRPPAGAHAAEVETSFRLVSTRLVAVTRVRG 1298 +K QV+ELGAYRMLVE+AHDLISAH+TD VF +AS F R+LG+ +LLGV + LV P+D+ V ++ L + QV YR+R VE+SFR+V T+LVA+TRV G Sbjct: 1 MKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGISTEDLLGVQLIHLVHPDDAGRVTEALPPALLCNQVTQVVVYRLRHQQQEFT--VESSFRVVPTKLVAITRVGG 117
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: A0A662WZ67_9STRA (PAS domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WZ67_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.680e-14 Identity = 59/156 (37.82%), Postives = 92/156 (58.97%), Query Frame = 3 Query: 831 SEESLRDLTPEERLKLNRERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLG--VSFLELVDPNDSQEVLRSVLATLRRGGIRQVQYRMRPPAGAHAAEVETSFRLVSTRLVAVTRV 1292 SE+ + L EE+ +RERNRDHSR+SR RKK +VE LK +V +L Y+ + E+ D I+ + + +A+F ++S + R+LG P +++ SFL+LV P+++QEV G R+ Q+R++ G + ETS RL +V TRV Sbjct: 229 SEDERQALLKEEK---SRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCLDCIALVAAESSAIFLYSSAAYTRVLGYQPHQIVPGQTSFLDLVHPDNAQEVRAVFTKFSTLGETRRFQFRIKSMEGEYF-RAETSARLAEKGVVCSTRV 380
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: A0A2P4XPB1_9STRA (PAS domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPB1_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 7.190e-13 Identity = 59/157 (37.58%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 831 SEESLRDLTPEERLKLNRERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLG--VSFLELVDPNDSQEVLRSVLATLRR-GGIRQVQYRMRPPAGAHAAEVETSFRLVSTRLVAVTRV 1292 SE+ + L EE+ +RERNRDHSR+SR RKK +VE LK +V +L Y+ + E+ D I+ + + +AVF F+S + R+LG +++ SFL++V P++ QEV R+V L G + ++R++ G + ET+ RL +V TRV Sbjct: 130 SEDEKQALIKEEK---SRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAVFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEV-RAVFTKLNTLGETHRFKFRIKSTDGEYFP-AETTARLAEKGVVCSTRV 281
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: A0A2D4C1Z3_PYTIN (PAS domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1Z3_PYTIN) HSP 1 Score: 80.5 bits (197), Expect = 3.770e-12 Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 882 RERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLG--VSFLELVDPNDSQEVLRSVLATLRR-GGIRQVQYRMRPPAGAHAAEVETSFRLVSTRLVAVTRV 1292 RERNRDHSR+SR RKK YVE LK +V +L Y+ + E DLI + + AVF F S + R+LG ++L+ SFL+LV P+ EV RS+ G ++ ++R+R G + ETS R+ +V TRV Sbjct: 267 RERNRDHSRKSRLRKKEYVESLKMEVQQLQIYQQVCEYNQDLIXLVTAEPKAVFLFTSSSYARVLGYQGSQLIPGQASFLDLVHPSQVAEV-RSIFQKFSNIGDFKRFRFRIRSADGEFF-DAETSARVAEKGVVCSTRV 404
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: H3GUL9_PHYRM (PAS domain-containing protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3GUL9_PHYRM) HSP 1 Score: 80.1 bits (196), Expect = 4.120e-12 Identity = 59/157 (37.58%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 831 SEESLRDLTPEERLKLNRERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLG--VSFLELVDPNDSQEVLRSVLATLRR-GGIRQVQYRMRPPAGAHAAEVETSFRLVSTRLVAVTRV 1292 SE+ + L EE+ +RERNRDHSR+SR RKK +VE LK +V +L Y+ + E+ D I+ + + +AVF F+S + R+LG +++ SFL++V P++ QEV R+V L G + ++R++ G ET+ RL +V TRV Sbjct: 228 SEDEKQALIKEEK---SRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAVFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEV-RAVFTKLNTLGETHRFKFRIKSTDGEFF-NAETTARLAEKGVVCSTRV 379
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: A0A3M6VUN5_9STRA (PAS domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUN5_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.010e-12 Identity = 57/157 (36.31%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 831 SEESLRDLTPEERLKLNRERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLG--VSFLELVDPNDSQEVLRSVLATLRR-GGIRQVQYRMRPPAGAHAAEVETSFRLVSTRLVAVTRV 1292 SE+ + L EE+ +RERNRDHSR+SR RKK +VE LK +V +L Y+ + E+ D I+ + + +A+F F+S + R+LG +++ SFL++V P++ QEV R+V L G + ++R++ G + ET+ R+ +V TRV Sbjct: 239 SEDEKQALIKEEK---SRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAIFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEV-RAVFTKLNTLGETHRFKFRIKSMDGEYF-NAETTARMAEKGVVCSTRV 390
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Match: K3WD31_GLOUD (PAS domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD31_GLOUD) HSP 1 Score: 78.2 bits (191), Expect = 2.000e-11 Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 882 RERNRDHSRRSRERKKAYVEGLKKQVSELGAYRMLVEEAHDLISAHSTDVNAVFTFASGGFDRLLGMDPTELLG--VSFLELVDPNDSQEVLRSVLATLRR-GGIRQVQYRMRPPAGAHAAEVETSFRLVSTRLVAVTRV 1292 RERNRDHSR+SR RKK +VE LK +VS+L Y+ + E+ DLI+ + D A+F ++S + R+LG +L+ SFL+LV P + QEV RSV G ++ Q+R++ G + ETS + +V TRV Sbjct: 262 RERNRDHSRKSRLRKKEFVESLKHEVSQLQIYQQICEQCLDLIALVNQD--AIFMYSSAAYSRVLGYQGHQLIAGQTSFLDLVHPENVQEV-RSVFQKFSALGESKKFQFRIKSVEGEYF-RAETSACMTDKGVVCSTRV 397 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig965.20973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig965.20973.1 >prot_F-serratus_M_contig965.20973.1 ID=prot_F-serratus_M_contig965.20973.1|Name=mRNA_F-serratus_M_contig965.20973.1|organism=Fucus serratus male|type=polypeptide|length=486bp MMGSSPSYSPHIEGHQHHVGKRGDPHNHSQGRSALSGMWPSSQGHFNDEWback to top mRNA from alignment at F-serratus_M_contig965:183857..191533- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig965.20973.1 ID=mRNA_F-serratus_M_contig965.20973.1|Name=mRNA_F-serratus_M_contig965.20973.1|organism=Fucus serratus male|type=mRNA|length=7677bp|location=Sequence derived from alignment at F-serratus_M_contig965:183857..191533- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig965:183857..191533- >mRNA_F-serratus_M_contig965.20973.1 ID=mRNA_F-serratus_M_contig965.20973.1|Name=mRNA_F-serratus_M_contig965.20973.1|organism=Fucus serratus male|type=CDS|length=2916bp|location=Sequence derived from alignment at F-serratus_M_contig965:183857..191533- (Fucus serratus male)back to top |