mRNA_F-serratus_M_contig1282.2095.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: A0A6H5JY30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY30_9PHAE) HSP 1 Score: 115 bits (287), Expect = 4.710e-29 Identity = 62/113 (54.87%), Postives = 76/113 (67.26%), Query Frame = 1
Query: 202 LVFSMTNFYHTRDGKPGQLIPWLQDVQLAEPYRETTVKVENARDGHSYEWEVRQVGQPDN--VIASATGAEATIIFPKLEWNMVTLQEKDASGNVTREYSENVIVKYVRREIR 534
L F NFYH RDGKP Q PWLQDV+L EP+RETT+ V + RDG+ Y WEVR G DN V ASA GA I L+ N++TL+E ++ G + R+ E V+VKYVRREIR
Sbjct: 60 LSFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTMSVSSPRDGYDYIWEVRS-GDTDNTKVRASARGAVVLITLTILDDNVITLKEVNSDGEIMRQLDELVMVKYVRREIR 171
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.540e-27 Identity = 61/112 (54.46%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 202 LVFSMTNFYHTRDGKPGQLIPWLQDVQLAEPYRETTVKVENARDGHSYEWEVRQVGQPDNVI-ASATGAEATIIFPKLEWNMVTLQEKDASGNVTREYSENVIVKYVRREIR 534
L F NFYH RDGKP Q PWLQDV+L EP+RETT+ V + RDG+ Y WEVR D + ASA GAEA I L+ N++TL+E ++ G + R+ E V+VKYVRREIR
Sbjct: 127 LAFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTLTVSSPRDGYDYIWEVRSGDTDDTEVRASARGAEALITLTILDDNVITLKEVNSDGEIMRQLDELVMVKYVRREIR 238
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 114 bits (286), Expect = 2.510e-26 Identity = 65/142 (45.77%), Postives = 85/142 (59.86%), Query Frame = 1
Query: 163 RQHGDVKSSLDEDLVFSMTNFYHTRDGKPGQLIPWLQDVQLAEPYRETTVKVENARDGHSYEWEV-----------------RQVGQPDNVIASATGAEATIIFPKLEWNMVTLQEKDA-SGNVTREYSENVIVKYVRREIR 534
+Q GDV L F+ NFYH RDGKP Q PWL+DV+L EP+RETT+ VE RDG Y W+V + G + V+A+A+GAEA ++F L N V+L+E ++ +G VTR E V+VKYVRREIR
Sbjct: 124 QQQGDVSPPLS----FTALNFYHVRDGKPAQDYPWLKDVKLIEPHRETTLDVETPRDGFEYRWKVLLGAPVSITDSAPASSFEEEGVTEEVVATASGAEAVVVFTHLGENSVSLEEVNSDTGVVTRRLQEKVMVKYVRREIR 261
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 114 bits (285), Expect = 3.340e-26 Identity = 64/133 (48.12%), Postives = 80/133 (60.15%), Query Frame = 1
Query: 172 GDVKSSLDED--LVFSMTNFYHTRDGKPGQLIPWLQDVQLAEPYRETTVKVENARDGHSYEWEVRQVGQPDNVIAS---------ATGAEATIIFPKLEWNMVTLQEKD-ASGNVTREYSENVIVKYVRREIR 534
G SS + D L F+ NFYH RDGKPGQ PWL+D +L EP+RETT+ VE R+G Y W+VR D+ +S A GA A ++ LE NM+TL+E + A G V R E V+VKYVRREIR
Sbjct: 100 GGASSSGESDQALAFTALNFYHVRDGKPGQDYPWLKDFKLVEPHRETTLAVEAPREGFEYRWDVRPTCTGDSCTSSSGGESSPIQAAGAVAEVVLTSLEENMITLEEVNVADGKVVRRLEETVMVKYVRREIR 232
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 111 bits (278), Expect = 2.990e-25 Identity = 59/127 (46.46%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 157 AIRQHGDVKSSLDEDLVFSMTNFYHTRDGKPGQLIPWLQDVQLAEPYRETTVKVENARDGHSYEWEVRQVGQPDNVIAS-ATGAEATIIFPKLEWNMVTLQEKDASGNVTREYSENVIVKYVRREIR 534
A + G + L F TNFY RDGKP Q PWL+DV+L EP+RETT V + RDG Y W V + + + ATG E+T++ L+ N V L+E DA G V R E V+VKYVRREIR
Sbjct: 151 AAAEDGQLSGEEIPRLSFEATNFYQLRDGKPAQDYPWLKDVKLIEPHRETTFTVSSPRDGFDYRWRVFAGSAAEGELCTEATGPESTVVLTTLDENEVVLEEVDADGTVVRRRQEKVMVKYVRREIR 277
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 108 bits (269), Expect = 4.790e-24 Identity = 57/114 (50.00%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 202 LVFSMTNFYHTRDGKPGQLIPWLQDVQLAEPYRETTVKVENARDGHSYEWEVRQVGQPDNVIASATGAEATIIFPK--LEWNMVTLQEKD-ASGNVTREYSENVIVKYVRREIR 534
L F NFYH RDGKP PWL+DV+L EP+RETT+ V++ R+G Y W +R V +A+GAEA ++ LE N+VTL+E + A+G V R E V+VKYVRREIR
Sbjct: 106 LAFHARNFYHVRDGKPASDYPWLRDVKLVEPHRETTLSVDDPREGFEYRWLIRGGSSASKVHTAASGAEAVVVLEAKHLEENLVTLEEVEIATGAVARRLDEFVMVKYVRREIR 219
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 101 bits (252), Expect = 9.130e-22 Identity = 60/144 (41.67%), Postives = 81/144 (56.25%), Query Frame = 1
Query: 115 SRGSNNLAEKLPKGAIRQHGDVKSSLDE--DLVFSMTNFYHTRDGKPGQLIPWLQDVQLAEPYRETTVKVENARDGHSYEWEVRQV-GQPDNVIASATGAEATIIFPKLEWNMVTLQEKDA-SGNVTREYSENVIVKYVRREIR 534
S GS ++ A++ H E L F TNFYH RDGKP PWL++V+L EP+RETT V + RDG Y W VR D++ A A+GAE +I L+ ++ L+E + +G V R E V+VKYVRRE+R
Sbjct: 98 SSGSGSVKANDTPAAVKVHHSRPGVATELAPLSFEATNFYHIRDGKPALDYPWLKEVKLIEPHRETTFTVSSPRDGFEYRWTVRGADADKDDLRAEASGAETVMILTVLDDTIIDLEEVNTETGVVARRLEEKVMVKYVRRELR 241
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 5.030e-18 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 1
Query: 262 PWLQDVQLAEPYRETTVKVENARDGHSYEWEVRQVGQPD--NVIASATGAEATIIFPKLEWNMVTLQEKDASGNVTREYSENVIVKYVRREIR 534
PWL+DV+L EP+RET + V + RDG+ Y WEVR G+ D ++IA+A+GAEA + L+ NM+T++E G + R+ E V+VKYVRREIR
Sbjct: 111 PWLRDVKLIEPHRETILAVSSPRDGYDYIWEVR-AGETDEADLIATASGAEAVVTLTVLDENMITVKEVHPDGEIVRQLDEMVMVKYVRREIR 202
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: A0A7S3XQ55_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ55_HETAK) HSP 1 Score: 55.8 bits (133), Expect = 1.060e-6 Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 1
Query: 220 NFYHTRDGKPGQLIPWLQDVQLAEPYRETTVKVENARDGHSYEWEVRQVGQPDNVIASATGAEATIIFPKLEWNMVTLQEKDASGNVTREYSENVIVKYVRREIR 534
N Y G+ G PWL+ +LAEPYRET +KV + G +Y W++ + + S T + + + L E +G T+ S+ V+VKYVRREIR
Sbjct: 1 NTYTRAYGRAGVQYPWLEGKKLAEPYRETELKVLDPIPGATYTWQI----EGSEELTSVGDERLTYSWKNVGTYKLILTETLENGESTQVASD-VVVKYVRREIR 100
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Match: A0A7S2R6I2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6I2_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 3.220e-5 Identity = 43/128 (33.59%), Postives = 60/128 (46.88%), Query Frame = 1
Query: 151 KGAIRQHGDVKSSLDEDLVFSMTNFYHTRDGKPGQLIPWLQDVQLAEPYRETTVKVENARDGHSYEWEVRQVGQPDNVIASATGAEATIIFPKLEWNMVTLQEKDASGNVTREYSENVIVKYVRREIR 534
K R + L L S+T+ Y R Q PWL LAEPYR ++++V + + SY W + PD V+ G ++F +N V L+ + V E NV+VKYVRREIR
Sbjct: 97 KNFFRSGEGGRRRLSTGLDMSITSEYSRRSPAATQY-PWLY---LAEPYRVSSLQVSDPQSESSYRWSL-----PDRVVGY--GESLDMVFTTTGYNEVLLERLEGDS-VVDEAVFNVMVKYVRREIR 212 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1282.2095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1282.2095.1 >prot_F-serratus_M_contig1282.2095.1 ID=prot_F-serratus_M_contig1282.2095.1|Name=mRNA_F-serratus_M_contig1282.2095.1|organism=Fucus serratus male|type=polypeptide|length=178bp SKKLADRCGYFRDGRRYRHDNQPIEGADGDERLPENSSSRGSNNLAEKLPback to top mRNA from alignment at F-serratus_M_contig1282:123106..123639+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1282.2095.1 ID=mRNA_F-serratus_M_contig1282.2095.1|Name=mRNA_F-serratus_M_contig1282.2095.1|organism=Fucus serratus male|type=mRNA|length=534bp|location=Sequence derived from alignment at F-serratus_M_contig1282:123106..123639+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1282:123106..123639+ >mRNA_F-serratus_M_contig1282.2095.1 ID=mRNA_F-serratus_M_contig1282.2095.1|Name=mRNA_F-serratus_M_contig1282.2095.1|organism=Fucus serratus male|type=CDS|length=1068bp|location=Sequence derived from alignment at F-serratus_M_contig1282:123106..123639+ (Fucus serratus male)back to top |