mRNA_F-serratus_M_contig953.20895.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN) HSP 1 Score: 73.9 bits (180), Expect = 3.250e-13 Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 28 LRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAALA 297 +RQA LP+REGGLG+ S+ I G A+IG ALVL R + A+ NL L L E P A AL EL+ + A S+I E VG+SWAA+A Sbjct: 1578 IRQARLPVREGGLGIPSTVDISGPAFIGGQALVLARALVATNATNLSHELAVLAETPYAQALTGELRKLPKYASGSEITEMVGTSWAAIA 1667
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6H5KDI2_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI2_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 2.140e-10 Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 25 ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAALA 297 A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL + P ALI+ LK +A + ++E+AVG SWA LA Sbjct: 210 ARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRLAQLPTGLALIDSLKKLAEIIIQDKLEKAVGQSWAKLA 300
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6H5KSR9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR9_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 2.420e-10 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 25 ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAALA 297 A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL + P ALI+ LK + + ++E+AVG SWA LA Sbjct: 43 ARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRLAQLPTGLALIDSLKKLEEIITKDKLEKAVGQSWAKLA 133
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 4.060e-10 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 25 ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAALA 297 A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL + P ALI+ LK + + ++E+AVG SWA LA Sbjct: 544 ARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRLAQLPTGLALIDSLKKLEEIITKDKLEKAVGQSWAKLA 634
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 4.060e-10 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 25 ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAALA 297 A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL + P ALI+ LK + + ++E+AVG SWA LA Sbjct: 210 ARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRLAQLPTGLALIDSLKKLEEIITKDKLEKAVGQSWAKLA 300
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 4.110e-10 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 25 ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAALA 297 A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL + P ALI+ LK + + ++E+AVG SWA LA Sbjct: 544 ARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRLAQLPTGLALIDSLKKLEEIITKDKLEKAVGQSWAKLA 634
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 4.130e-10 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 25 ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAALA 297 A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL + P ALI+ LK + + ++E+AVG SWA LA Sbjct: 392 ARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRLAQLPTGLALIDSLKKLEEIITKDKLEKAVGQSWAKLA 482
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6H5L2W9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W9_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 4.160e-10 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 25 ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAALA 297 A Q HLP+REGGLG+TS+ I+ +A++ ALV + V AS + L RL + P ALI+ LK + + ++E+AVG SWA LA Sbjct: 177 ARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSVQASTGYTVEQCLPRLAQLPTGLALIDSLKKLEEIITKDKLEKAVGQSWAKLA 267
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6H5L7H4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7H4_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 8.170e-10 Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 25 ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAAL 294 A Q HLPIREGGLG+TSS I+ +A++ ALV + V AS + L +L + P ALI+ LK + + ++E AVG SW L Sbjct: 41 ARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSKSVQASTGLTIEQCLPQLAQLPTGLALIDSLKKLKEIITKDKLERAVGQSWTKL 130
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 2.520e-9 Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 25 ALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASARGNLPSLLERLPERPMASALIEELKTVATEAKRSQIEEAVGSSWAAL 294 A Q HLPIREGGLG+TSS I+ +A++ ALV + V AS + L +L + P ALI+ LK + + ++E AVG SW L Sbjct: 391 ARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSKSVQASTGLTIEQCLPQLAQLPTGLALIDSLKKLKEIITKDKLERAVGQSWTKL 480 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig953.20895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig953.20895.1 >prot_F-serratus_M_contig953.20895.1 ID=prot_F-serratus_M_contig953.20895.1|Name=mRNA_F-serratus_M_contig953.20895.1|organism=Fucus serratus male|type=polypeptide|length=101bp NQTYLGHEALRQAHLPIREGGLGLTSSSSIKGAAYIGCHALVLGRVVAASback to top mRNA from alignment at F-serratus_M_contig953:68087..68391+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig953.20895.1 ID=mRNA_F-serratus_M_contig953.20895.1|Name=mRNA_F-serratus_M_contig953.20895.1|organism=Fucus serratus male|type=mRNA|length=305bp|location=Sequence derived from alignment at F-serratus_M_contig953:68087..68391+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig953:68087..68391+ >mRNA_F-serratus_M_contig953.20895.1 ID=mRNA_F-serratus_M_contig953.20895.1|Name=mRNA_F-serratus_M_contig953.20895.1|organism=Fucus serratus male|type=CDS|length=606bp|location=Sequence derived from alignment at F-serratus_M_contig953:68087..68391+ (Fucus serratus male)back to top |