mRNA_F-serratus_M_contig128.2086.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: D7FUP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUP2_ECTSI) HSP 1 Score: 168 bits (426), Expect = 1.460e-52 Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1
Query: 1 GHHTILLVQRDYPNSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
G+HTILLVQRD NSR +YDLPSTSQAMERV KMYEARLKE NP QVHITYDITDLY FID+LGDLSALV + +TGMY PHGKAWIKE+LFK+FQQQA
Sbjct: 2 GYHTILLVQRDSVNSRMYYDLPSTSQAMERVVKMYEARLKEVNPRQVHITYDITDLYGFIDELGDLSALVANTDTGMYTPHGKAWIKEYLFKYFQQQA 99
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: A0A067C2K0_SAPPC (Enhancer of rudimentary homolog n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C2K0_SAPPC) HSP 1 Score: 107 bits (268), Expect = 1.950e-28 Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 1
Query: 7 HTILLVQ-RDYPNSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
HTI+LVQ + PNSRT+ D S + AM+ V KMYEA+LK+ NPS+ +ITYDI DLY +ID L DLS LV D ET Y+P GK WIK+ +F+ + QA
Sbjct: 8 HTIILVQYTEDPNSRTYLDFESVNGAMDGVVKMYEAKLKQLNPSKRNITYDIQDLYNYIDSLADLSTLVLDLETKTYLPSGKEWIKKKIFQVLRNQA 104
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: W7TPS2_9STRA (Enhancer of rudimentary homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPS2_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.760e-28 Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 1 GHHTILLVQRDYP-NSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
HTILLVQ +SRT++D P+ +AM+ V KMYE +LK+ NPS HITYDIT L RF+DDL DLSALV D T Y PH K W+K +++ +QQA
Sbjct: 3 SRHTILLVQPTRAASSRTFFDFPTVYEAMDEVVKMYEKQLKQLNPSIPHITYDITHLLRFVDDLVDLSALVFDPRTKQYSPHSKEWVKSKIYENLKQQA 101
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: A0A0N4UZR5_ENTVE (Enhancer of rudimentary homolog n=2 Tax=Oxyuridae TaxID=51026 RepID=A0A0N4UZR5_ENTVE) HSP 1 Score: 107 bits (266), Expect = 3.490e-28 Identity = 51/97 (52.58%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 7 HTILLVQ-RDYPNSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
HTILL+Q P+SRTW D +T++ ME V K++E LK+ NP ITYD+ +L+ FID LGDLS LV +D T Y PH K WIKE ++K Q+QA
Sbjct: 3 HTILLIQPTSRPDSRTWSDYETTTECMEGVCKIFEEHLKKLNPKSASITYDVQNLFHFIDRLGDLSCLVFNDATSTYAPHNKVWIKEQIYKMLQRQA 99
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: H3GGY0_PHYRM (Enhancer of rudimentary homolog n=14 Tax=Oomycota TaxID=4762 RepID=H3GGY0_PHYRM) HSP 1 Score: 105 bits (262), Expect = 1.640e-27 Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 1
Query: 7 HTILLVQ--RDYPNSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
HTI+LVQ RD PNSRT+ D S + M+ V KMYEA+LK+ NPS +ITYDI DLY +ID L DLSALV D ET Y+P GK WIK+ +F+ + QA
Sbjct: 9 HTIILVQYTRD-PNSRTYLDFESVNGGMDGVVKMYEAKLKQLNPSMKNITYDIQDLYTYIDSLTDLSALVLDLETKTYLPCGKEWIKKKVFQVLKNQA 105
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: W2GHL6_PHYPR (Enhancer of rudimentary homolog n=9 Tax=Phytophthora TaxID=4783 RepID=W2GHL6_PHYPR) HSP 1 Score: 103 bits (257), Expect = 9.420e-27 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 1
Query: 7 HTILLVQ--RDYPNSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
HTI+LVQ RD PNSRT+ D S + M+ V KMYEA+LK+ NP+ +ITYDI DLY +ID L DLSALV D ET Y+P GK WIK+ +F+ + QA
Sbjct: 9 HTIILVQYTRD-PNSRTYLDFESVNGGMDGVVKMYEAKLKQLNPNLKNITYDIQDLYTYIDSLTDLSALVLDLETKTYLPCGKEWIKKKVFQVLKNQA 105
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: A0A3R7W6D4_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7W6D4_9STRA) HSP 1 Score: 103 bits (256), Expect = 5.120e-26 Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 7 HTILLVQ--RDYPNSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
HTI+LVQ RD PNSRT+ D S + M+ V KMYEA+LK+ NP +ITYDI DLY +ID L DLSALV D ET Y+P GK WIK+ +F+ + QA
Sbjct: 57 HTIILVQYTRD-PNSRTYLDFESVNGGMDGVVKMYEAKLKQLNPDLKNITYDIQDLYTYIDSLTDLSALVLDLETKTYLPCGKEWIKKKVFQVLKNQA 153
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: A0A7S2V253_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V253_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.550e-26 Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 7 HTILLVQRDYPN--SRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
HTI+L Q PN SR W + + AM+ V KMYE RLK+ NP HITYDI+DL+ ++D L +LSAL +D+ETG Y P+GK WIK+ +F+ + QA
Sbjct: 27 HTIVLSQTT-PNIGSRRWNEYETIKMAMDSVIKMYETRLKQVNPDAAHITYDISDLFGYVDTLPELSALAYDNETGQYAPYGKEWIKQRIFQHLRSQA 123
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: A0A564Y650_HYMDI (Enhancer of rudimentary homolog n=1 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A564Y650_HYMDI) HSP 1 Score: 99.0 bits (245), Expect = 5.610e-25 Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 7 HTILLVQRDY--PNSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
HTILL+Q+ P+SR W D + +Q +E V K+YE +LK++NP+ ITYDI+ L+ FID L DLS LV + +G Y+PH K WIKE ++ ++QA
Sbjct: 3 HTILLLQQQVKKPDSRVWADYETVNQFLEGVCKIYEEQLKQQNPTAPTITYDISQLFEFIDQLADLSCLVFNPHSGTYVPHTKEWIKENIYALLRKQA 100
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Match: UPI0002657C26 (enhancer of rudimentary homolog n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002657C26) HSP 1 Score: 98.6 bits (244), Expect = 7.320e-25 Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 1
Query: 7 HTILLVQRDYPNSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITYDITDLYRFIDDLGDLSALVHDDETGMYIPHGKAWIKEFLFKFFQQQA 294
HTILL+Q P +RT+ D S ++ MER+ ++E LK++NP ITYDI+ L+ FID L D++ LVH T +Y P+ KAWIKE ++ +QQA
Sbjct: 3 HTILLLQTSGPETRTYADFESINECMERICHIFEEHLKKQNPESPSITYDISQLFEFIDQLHDMTCLVHQKTTNVYSPYTKAWIKEKIYALLKQQA 98 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig128.2086.1 >prot_F-serratus_M_contig128.2086.1 ID=prot_F-serratus_M_contig128.2086.1|Name=mRNA_F-serratus_M_contig128.2086.1|organism=Fucus serratus male|type=polypeptide|length=98bp GHHTILLVQRDYPNSRTWYDLPSTSQAMERVTKMYEARLKEKNPSQVHITback to top mRNA from alignment at F-serratus_M_contig128:689179..690225- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig128.2086.1 ID=mRNA_F-serratus_M_contig128.2086.1|Name=mRNA_F-serratus_M_contig128.2086.1|organism=Fucus serratus male|type=mRNA|length=1047bp|location=Sequence derived from alignment at F-serratus_M_contig128:689179..690225- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig128:689179..690225- >mRNA_F-serratus_M_contig128.2086.1 ID=mRNA_F-serratus_M_contig128.2086.1|Name=mRNA_F-serratus_M_contig128.2086.1|organism=Fucus serratus male|type=CDS|length=588bp|location=Sequence derived from alignment at F-serratus_M_contig128:689179..690225- (Fucus serratus male)back to top |