prot_F-serratus_M_contig128.2073.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig128.2073.1
Unique Nameprot_F-serratus_M_contig128.2073.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length262
Homology
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: A0A6H5KSL7_9PHAE (NifU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL7_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 4.120e-81
Identity = 155/241 (64.32%), Postives = 164/241 (68.05%), Query Frame = 0
Query:   10 FMTGYFIVAVV---LQGSTAGAFAPPSMVPASISRTDSRCLSCC--------------------------ARASVDRPRRKQVRSRGWDVRRRPSTQLWSTDIESPFAKPEVADMDD-DDEDECLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTGVSSIQ 220
            FM G  + AV    LQ S AGAFAPP+ VPA      + C SC                           AR     PRR          RR     + STDIESPFA P +ADM D +D D  L LTLENVE VLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRL+QRIPEISEVVQSIPNGPELTVE+VEK+LDGVRPFLSVAGGSI IQSLTGVSSIQ
Sbjct:    5 FMRGIAVAAVAAISLQNSRAGAFAPPAFVPAG----PAHCRSCSSXXXXXXXXXXXXXXXXXXXXXXXQQARGWGSAPRRNGASESAVAPRR-----MSSTDIESPFASPGMADMGDGEDADALLTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLMQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQ 236          
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: A0A835Z016_9STRA (NifU-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z016_9STRA)

HSP 1 Score: 202 bits (513), Expect = 6.770e-62
Identity = 106/139 (76.26%), Postives = 120/139 (86.33%), Query Frame = 0
Query:   83 IESPFAKPE-VADMDDDDEDECLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTGVSSIQ 220
            IESPFA    VA  DD      LPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLEL+GACGSCPSSTMTMKMGLERRL+++IPEISEVVQS+P GP+L +E +EK+LDGVRPFLSVAGG+I++ +L GV  +Q
Sbjct:    7 IESPFAGGGGVAGGDDGP----LPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELQGACGSCPSSTMTMKMGLERRLIEKIPEISEVVQSMPEGPQLNMEEIEKVLDGVRPFLSVAGGAISVAALEGVGGMQ 141          
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: A0A7R9U202_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U202_9STRA)

HSP 1 Score: 194 bits (492), Expect = 5.650e-58
Identity = 101/151 (66.89%), Postives = 118/151 (78.15%), Query Frame = 0
Query:   70 VRRRPSTQLWSTDIESPFAKPEVADMDDDDEDECLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTGVSSIQ 220
            V+ R   Q  S D+ESPF        D+      LPLTL+NVELVLDEMRPYLMSDGGNV V EIDGP+VRLEL+GACG+CPSSTMTMKMGLERRL +RIPEISEVVQ++P+ PEL+   VE +LDGVRPFL VAGGSIT+Q ++GV  +Q
Sbjct:   59 VQWRLQAQQESIDVESPFQSGTPTARDNSH----LPLTLDNVELVLDEMRPYLMSDGGNVAVAEIDGPIVRLELQGACGTCPSSTMTMKMGLERRLKERIPEISEVVQAVPDAPELSEAGVESVLDGVRPFLQVAGGSITLQEISGVGGLQ 205          
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: A0A4D9D2Y8_9STRA (NifU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2Y8_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.010e-54
Identity = 95/142 (66.90%), Postives = 118/142 (83.10%), Query Frame = 0
Query:   80 STD-IESPFAKPEVADMDDDDEDECLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTGVSSIQ 220
            STD I SPF   E     D  +D  LPLTLENVE+VLDEMRPYLMSDGGNV V EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP L+ E+++++L+GVRPFL VAGGSI+++ ++G+  +Q
Sbjct:   70 STDTITSPF---ESGVKQDGGDDGPLPLTLENVEMVLDEMRPYLMSDGGNVVVSEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISGLGGLQ 208          
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: W7TNI1_9STRA (Nifu like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNI1_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.100e-53
Identity = 85/121 (70.25%), Postives = 109/121 (90.08%), Query Frame = 0
Query:  100 EDECLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTGVSSIQ 220
            +D  LPLTLENVE+VLDEMRPYLMSDGGNV V +IDGPVV+LEL+GACGSCPSSTMTMKMGLERRL ++IPEISEV+Q++P GP L+ E+++++L+GVRPFL VAGGSI+++ ++G+  +Q
Sbjct:   85 DDGPLPLTLENVEMVLDEMRPYLMSDGGNVVVSDIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEKIPEISEVIQAMPEGPALSTENIDQVLEGVRPFLMVAGGSISVKEISGLGGLQ 205          
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: A0A7S2C848_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C848_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.050e-52
Identity = 97/156 (62.18%), Postives = 117/156 (75.00%), Query Frame = 0
Query:   82 DIESPFAKPEVADMDDDDEDE-----------------CLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTGVSSIQ 220
            ++ SPF +  + DM+DDD DE                  L L  +NV+L+LDEMRPYL+SDGGNV + EIDGPVV+LEL+GACGSCPSSTMTMKMGLERRL + IPEISEVVQ++P+ P LT ESV+ IL+G+RPFL VAGG I I+SLTGV SIQ
Sbjct:   51 EVTSPFEQ-RLEDMEDDDGDEEEGDFEGMVGGASQIEGPLDLNWDNVDLILDEMRPYLISDGGNVVISEIDGPVVKLELQGACGSCPSSTMTMKMGLERRLKEAIPEISEVVQAMPDSPPLTEESVDGILEGIRPFLQVAGGKIEIESLTGVDSIQ 205          
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: A0A8J2S7I7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7I7_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.360e-52
Identity = 90/136 (66.18%), Postives = 110/136 (80.88%), Query Frame = 0
Query:   85 SPFAKPEVADMDDDDEDECLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTGVSSIQ 220
            SPF +  +   DD       PLTL+NVE++LDE+RPYLMSDGGNVRV  I+GPVVRL+LEGACG CPSSTMTMKMGLERRL + IPEISEVVQ +P+ P++T E+V+++LDGVRPFLSVAGGSI + S++G   IQ
Sbjct:   45 SPFEEEVIRSADDQ-----YPLTLDNVEMILDELRPYLMSDGGNVRVSGIEGPVVRLQLEGACGDCPSSTMTMKMGLERRLKEAIPEISEVVQVLPDAPDITEEAVDEVLDGVRPFLSVAGGSIDLVSVSGSGGIQ 175          
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: A0A7S1H4I0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H4I0_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.310e-50
Identity = 83/121 (68.60%), Postives = 102/121 (84.30%), Query Frame = 0
Query:  100 EDECLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTGVSSIQ 220
            +D  L LT +NVELVL+EMRPYL+SDGGNV + EIDGPVVRLEL+GACG+CPSST TMKMGLER+L ++IPEI EVVQS+P GPEL  E +  +LDGVRPFL VAGGSI ++S++G + +Q
Sbjct:   23 DDGPLELTWDNVELVLEEMRPYLISDGGNVAISEIDGPVVRLELQGACGTCPSSTQTMKMGLERKLREKIPEIQEVVQSMPEGPELCEEEINVVLDGVRPFLQVAGGSIDVESISGENGLQ 143          
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: F0Y565_AURAN (NifU domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y565_AURAN)

HSP 1 Score: 169 bits (427), Expect = 6.190e-50
Identity = 80/114 (70.18%), Postives = 100/114 (87.72%), Query Frame = 0
Query:  102 ECLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTG 215
            E  PLT ENVEL+LDE+RPYLMSDGGNVR+  I+GPVV+LELEGACG+CPSSTMTMKMGLERRL + IPEIS+VVQ +P+ P++   SV+++L+GVRPFLSVAGG++ + SL+G
Sbjct:    1 EQFPLTWENVELILDELRPYLMSDGGNVRIAGIEGPVVKLELEGACGTCPSSTMTMKMGLERRLKEAIPEISDVVQYLPDTPDMDEASVDEVLEGVRPFLSVAGGTVDLVSLSG 114          
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Match: A0A7S1D6Z8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6Z8_CYCTE)

HSP 1 Score: 170 bits (431), Expect = 8.240e-49
Identity = 89/134 (66.42%), Postives = 107/134 (79.85%), Query Frame = 0
Query:  104 LPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPFLSVAGGSITIQSLTGVSSIQASHAFCLGLE-AHASLN 236
            L LT ENVELVLDEMRPYL+ DGGNV++ EIDGPVVRL+LEGACG+CPSST TMKMGLERRL +RIPEI EV+Q++P GP+L  + V  +LDGVRPFL VAGG+I I  + G+ S+Q +    L +E A ASLN
Sbjct:   88 LDLTEENVELVLDEMRPYLIQDGGNVKIQEIDGPVVRLQLEGACGTCPSSTQTMKMGLERRLRERIPEIQEVIQAMPQGPDLCDDEVNVVLDGVRPFLQVAGGTIDIVVIEGIGSLQPT--ITLKMEGASASLN 219          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL7_9PHAE4.120e-8164.32NifU domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z016_9STRA6.770e-6276.26NifU-like domain-containing protein n=1 Tax=Tribon... [more]
A0A7R9U202_9STRA5.650e-5866.89Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9D2Y8_9STRA1.010e-5466.90NifU domain-containing protein n=1 Tax=Nannochloro... [more]
W7TNI1_9STRA2.100e-5370.25Nifu like protein n=1 Tax=Nannochloropsis gaditana... [more]
A0A7S2C848_9STRA1.050e-5262.18Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2S7I7_9STRA1.360e-5266.18Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1H4I0_9STRA2.310e-5068.60Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
F0Y565_AURAN6.190e-5070.18NifU domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S1D6Z8_CYCTE8.240e-4966.42Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 184..242
e-value: 1.3E-6
score: 30.2
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 103..181
e-value: 2.6E-30
score: 106.0
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 108..179
IPR001075NIF system FeS cluster assembly, NifU, C-terminalPFAMPF01106NifUcoord: 111..176
e-value: 2.0E-24
score: 85.5
NoneNo IPR availablePANTHERPTHR11178:SF39NIFU-LIKE PROTEIN 2, CHLOROPLASTICcoord: 77..208
NoneNo IPR availablePANTHERPTHR11178IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATEDcoord: 77..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePRODOMPD002830coord: 115..177
e-value: 9.0E-23
score: 265.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.644
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig128contigF-serratus_M_contig128:456932..462962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig128.2073.1mRNA_F-serratus_M_contig128.2073.1Fucus serratus malemRNAF-serratus_M_contig128 456556..463343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig128.2073.1 ID=prot_F-serratus_M_contig128.2073.1|Name=mRNA_F-serratus_M_contig128.2073.1|organism=Fucus serratus male|type=polypeptide|length=262bp
MWIAGSQACFMTGYFIVAVVLQGSTAGAFAPPSMVPASISRTDSRCLSCC
ARASVDRPRRKQVRSRGWDVRRRPSTQLWSTDIESPFAKPEVADMDDDDE
DECLPLTLENVELVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSC
PSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVESVEKILDGVRPF
LSVAGGSITIQSLTGVSSIQASHAFCLGLEAHASLNKSCSMEKVSFFSSR
RNASLDLDRPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034904FSCA_dom_sf
IPR001075NIF_FeS_clus_asmbl_NifU_C