prot_F-serratus_M_contig128.2065.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig128.2065.1
Unique Nameprot_F-serratus_M_contig128.2065.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length52
Homology
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: F0YDV4_AURAN (Ribosomal protein L39 (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YDV4_AURAN)

HSP 1 Score: 100 bits (248), Expect = 7.570e-27
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            QPSHKTFRTK TL KKMKQNRPIP WIR+RTDNKIR+NAKRRHWRRTKLGL
Sbjct:    1 QPSHKTFRTKRTLAKKMKQNRPIPQWIRMRTDNKIRWNAKRRHWRRTKLGL 51          
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: A0A199VEH0_ANACO (60S ribosomal protein L39 n=45 Tax=cellular organisms TaxID=131567 RepID=A0A199VEH0_ANACO)

HSP 1 Score: 95.5 bits (236), Expect = 5.150e-25
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            PSHKTFR K+ L KKM+QNRPIPHWIR+RTDN IRYNAKRRHWRRTKLG 
Sbjct:    2 PSHKTFRIKMKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51          
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: A0A835YZW6_9STRA (Ribosomal protein L39e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW6_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 5.150e-25
Identity = 44/50 (88.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            PSHKTFRTK TL  K+KQNRPIP+WIRLRTDN IRYNAKRRHWRRTKLGL
Sbjct:    2 PSHKTFRTKRTLAVKLKQNRPIPNWIRLRTDNTIRYNAKRRHWRRTKLGL 51          
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: A0A0A0LYE1_CUCSA (Uncharacterized protein n=9 Tax=fabids TaxID=91835 RepID=A0A0A0LYE1_CUCSA)

HSP 1 Score: 95.1 bits (235), Expect = 7.320e-25
Identity = 43/50 (86.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            PSHKTFR K  L KKM+QNRPIPHWIRLRTDN IRYNAKRRHWRRTKLG 
Sbjct:    2 PSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51          
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: A0A7J7Q6B9_9CHLO (60S ribosomal protein L39 n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q6B9_9CHLO)

HSP 1 Score: 95.1 bits (235), Expect = 7.320e-25
Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            PS KTFRTKV L KK KQNRPIPHWIR RT+NKIRYNAKRRHWRRTKLG+
Sbjct:    2 PSQKTFRTKVKLAKKAKQNRPIPHWIRFRTNNKIRYNAKRRHWRRTKLGI 51          
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: A0A565CAR9_9BRAS (Uncharacterized protein n=14 Tax=Mesangiospermae TaxID=1437183 RepID=A0A565CAR9_9BRAS)

HSP 1 Score: 95.1 bits (235), Expect = 7.670e-25
Identity = 43/51 (84.31%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            QPSHK+F  K  LGKKM+QNRPIPHWIRLRTDN IRYNAKRRHWRRTKLG 
Sbjct:    3 QPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 53          
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: A0A218W104_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218W104_PUNGR)

HSP 1 Score: 95.9 bits (237), Expect = 8.850e-25
Identity = 43/51 (84.31%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            QPSHKTFR K  L KKM+QNRPIPHWIR+RTDN IRYNAKRRHWRRTKLG 
Sbjct:   35 QPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 85          
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: A0A2I0K803_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K803_PUNGR)

HSP 1 Score: 95.9 bits (237), Expect = 9.360e-25
Identity = 43/51 (84.31%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            QPSHKTFR K  L KKM+QNRPIPHWIR+RTDN IRYNAKRRHWRRTKLG 
Sbjct:   37 QPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 87          
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: H3G5I2_PHYRM (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=H3G5I2_PHYRM)

HSP 1 Score: 94.7 bits (234), Expect = 1.040e-24
Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            QPSHKTFRTK  L KK KQNRPIP WIRLRTDN I+YNAKRRHWRRTKLGL
Sbjct:    1 QPSHKTFRTKRILAKKAKQNRPIPQWIRLRTDNTIKYNAKRRHWRRTKLGL 51          
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Match: A0A6J0NXD3_RAPSA (60S ribosomal protein L39-2 n=15 Tax=Magnoliopsida TaxID=3398 RepID=A0A6J0NXD3_RAPSA)

HSP 1 Score: 94.7 bits (234), Expect = 1.040e-24
Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGL 51
            PSHKTF+ K  LGKKM+QNRPIP WIRLRTDNKIRYNAKRRHWRRTKLG 
Sbjct:    2 PSHKTFKIKKKLGKKMRQNRPIPGWIRLRTDNKIRYNAKRRHWRRTKLGF 51          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0YDV4_AURAN7.570e-2790.20Ribosomal protein L39 (Fragment) n=2 Tax=Pelagomon... [more]
A0A199VEH0_ANACO5.150e-2584.0060S ribosomal protein L39 n=45 Tax=cellular organi... [more]
A0A835YZW6_9STRA5.150e-2588.00Ribosomal protein L39e n=1 Tax=Tribonema minus Tax... [more]
A0A0A0LYE1_CUCSA7.320e-2586.00Uncharacterized protein n=9 Tax=fabids TaxID=91835... [more]
A0A7J7Q6B9_9CHLO7.320e-2586.0060S ribosomal protein L39 n=1 Tax=Scenedesmus sp. ... [more]
A0A565CAR9_9BRAS7.670e-2584.31Uncharacterized protein n=14 Tax=Mesangiospermae T... [more]
A0A218W104_PUNGR8.850e-2584.31Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
A0A2I0K803_PUNGR9.360e-2584.31Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
H3G5I2_PHYRM1.040e-2486.27Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A6J0NXD3_RAPSA1.040e-2486.0060S ribosomal protein L39-2 n=15 Tax=Magnoliopsida... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000077Ribosomal protein L39ePFAMPF00832Ribosomal_L39coord: 9..49
e-value: 3.4E-23
score: 81.0
IPR000077Ribosomal protein L39ePANTHERPTHR19970RIBOSOMAL PROTEIN L39Ecoord: 2..51
IPR023626Ribosomal protein L39e domain superfamilyGENE3D1.10.1620.10coord: 1..51
e-value: 7.7E-31
score: 107.6
IPR023626Ribosomal protein L39e domain superfamilySUPERFAMILY48662Ribosomal protein L39ecoord: 3..50
NoneNo IPR availablePANTHERPTHR19970:SF23coord: 2..51
NoneNo IPR availablePRODOMPD007914coord: 2..37
e-value: 2.0E-10
score: 151.0
IPR020083Ribosomal protein L39e, conserved sitePROSITEPS00051RIBOSOMAL_L39Ecoord: 30..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig128contigF-serratus_M_contig128:122888..123965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig128.2065.1mRNA_F-serratus_M_contig128.2065.1Fucus serratus malemRNAF-serratus_M_contig128 122888..123965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig128.2065.1 ID=prot_F-serratus_M_contig128.2065.1|Name=mRNA_F-serratus_M_contig128.2065.1|organism=Fucus serratus male|type=polypeptide|length=52bp
QPSHKTFRTKVTLGKKMKQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLG
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000077Ribosomal_L39
IPR023626Ribosomal_L39e_dom_sf
IPR020083Ribosomal_L39_CS