prot_F-serratus_M_contig128.2064.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig128.2064.1
Unique Nameprot_F-serratus_M_contig128.2064.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length379
Homology
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: A0A6H5JIA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA6_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 8.410e-107
Identity = 158/201 (78.61%), Postives = 180/201 (89.55%), Query Frame = 0
Query:  177 PQPKAPPRGNNLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWIEEDDTAKVMTRFNS 377
            PQPKAPPRG+NLLVVGLGNPG +YK TRHNAGFLVAEELARRHGGTLKI+TAFQGEYCS+  + KSVGIL P T+MNNSG+SARKV+DFFKLP+N+A++LVDEVALDFGQLRLK KG  GGHNGLKS+QAHLKTP+Y+RLRIG+G    +     LSDHVLGEFTR+EKKELD+V+A+ACDAVE WIEE+D AKVMTRFNS
Sbjct:  165 PQPKAPPRGDNLLVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVRVKHKSVGILRPITYMNNSGISARKVMDFFKLPMNAAIVLVDEVALDFGQLRLKGKGGAGGHNGLKSLQAHLKTPEYTRLRIGVGASKFSEA---LSDHVLGEFTRTEKKELDNVIADACDAVEHWIEEEDMAKVMTRFNS 362          
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: D8LSW9_ECTSI (Peptidyl-tRNA hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW9_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 5.090e-92
Identity = 136/176 (77.27%), Postives = 155/176 (88.07%), Query Frame = 0
Query:  202 FTRHNAGFLVAEELARRHGGTLKIRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWIEEDDTAKVMTRFNS 377
             TRHNAGFLVAEELARRHGGTLKI+TAFQGEYCS+    KSVGIL P T+MNNSGMSARKV+DFFKLP+N+A++LVDEVALDFGQLRLK KG  GGHNGLKS+QAHLKTP+Y+RLRIG+G    +     LSDHVLGEFTR+EKKELD+V+A+ACDAVE W+EE+D AKVMTRFNS
Sbjct:    1 MTRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVRVNDKSVGILRPITYMNNSGMSARKVMDFFKLPMNAAIVLVDEVALDFGQLRLKGKGGAGGHNGLKSLQAHLKTPEYTRLRIGVGASKFSEA---LSDHVLGEFTRTEKKELDNVIADACDAVEHWVEEEDMAKVMTRFNS 173          
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: A0A4D9CWV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV7_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.340e-71
Identity = 118/195 (60.51%), Postives = 153/195 (78.46%), Query Frame = 0
Query:  183 PRGNNLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWIEEDDTAKVMTRFNS 377
            PR  NLL+VGLGNPGK+Y  TRHNAGFL  + LARR G   ++R+AFQGEY  ++++GKSVG+L PTTFMN SG S RKV+D+FKLP++S L++VDEVALD GQ+RL+  GS GGHNGLKSI++ LK  DY+RLRIG+GG       G + DHVLG+F+RSE+K LD ++ +A +A+E WIE+D+T KVM R N+
Sbjct:  742 PRSKNLLIVGLGNPGKEYAMTRHNAGFLAVDLLARRLGADFRLRSAFQGEYGCVAYKGKSVGLLKPTTFMNRSGQSLRKVLDYFKLPVSSVLVVVDEVALDIGQIRLRQTGSAGGHNGLKSIESCLKCKDYNRLRIGVGG----AAPGSMVDHVLGQFSRSERKVLDDMLIDAVEAIEDWIEDDNTDKVMNRVNA 932          
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: A0A836CKJ3_9STRA (Peptidyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKJ3_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.320e-63
Identity = 106/177 (59.89%), Postives = 127/177 (71.75%), Query Frame = 0
Query:  202 FTRHNAGFLVAEELARRHGGTLKIRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWIEEDDTAKVMTRFNSR 378
             TRHN GFLVA+EL+RR G  LK ++ FQG Y S   +GKSVG+L P+TFMNNSG +ARKV DFFKL  +  L+L D+VALDFG LRL+ KGS GGHNGLKS+Q HL T DY+RLRIG+G          L  HVLGEF++ E+KELD VV++A   VE WI EDD A VMT  N +
Sbjct:    1 MTRHNIGFLVADELSRRWGCALKTQSKFQGLYGSAQVKGKSVGVLKPSTFMNNSGQAARKVTDFFKLNADHVLVLTDDVALDFGALRLRMKGSAGGHNGLKSLQQHLGTQDYARLRIGVGAPRK-----DLVSHVLGEFSKVERKELDMVVSDAASVVEHWIAEDDAALVMTAINGK 172          
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: A0A7S3ACE0_9RHOD (Peptidyl-tRNA hydrolase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ACE0_9RHOD)

HSP 1 Score: 184 bits (466), Expect = 8.920e-53
Identity = 86/189 (45.50%), Postives = 127/189 (67.20%), Query Frame = 0
Query:  184 RGNNLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWIEEDDTAKVM 372
            RG+ L V+GLGNPG +++ TRHN GF + E  A+RHGG +K+   +  E C I    K+V ++ P TFMN SG S RK+VDF+KLP ++ LI+ D++ L+ G++RL+AKGS GGHNGLK I+  L T  Y RL++G+GG + A     L D+VLG+F RSE   +D ++    + ++ W++  D +KV+
Sbjct:   32 RGSRLAVIGLGNPGNEFRSTRHNVGFDIIEAFAQRHGGNMKMAQKYLAEMCEIKLENKTVMLVKPMTFMNLSGTSVRKIVDFYKLPHDAILIVADDIYLELGRVRLRAKGSSGGHNGLKHIEKSLGTQIYPRLKVGVGGPNKA----DLKDYVLGKFKRSEVDAVDDMLWTCVELIDEWVKNADLSKVV 216          
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: F8L348_SIMNZ (Peptidyl-tRNA hydrolase n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) TaxID=331113 RepID=F8L348_SIMNZ)

HSP 1 Score: 177 bits (450), Expect = 7.360e-51
Identity = 84/176 (47.73%), Postives = 116/176 (65.91%), Query Frame = 0
Query:  188 LLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWI 363
             L+ GLGNPGK+Y+ TRHN GF+V +  A + G T K  +  QGE  S +     V +LLP T+MN SG S RKV+D++K+ +   L++ D++ALDFG LR + KGS GGHNGLK I++HL T +Y RLR+GIG  DH    G L D+VL  F+  E+K+L  V+ E  D ++ W+
Sbjct:    6 FLITGLGNPGKKYENTRHNFGFMVVKAFAEKQGWTFKADSNLQGEIASGTVSESKVILLLPKTYMNLSGQSVRKVLDYYKIDLTHFLVVADDIALDFGTLRFREKGSSGGHNGLKDIESHLGTQEYQRLRLGIGDRDH----GYLEDYVLSPFSAEEQKDLPKVIEEGVDFLDKWL 177          
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: A0A2A4YKD0_9BACT (Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Aerophobetes bacterium TaxID=2030807 RepID=A0A2A4YKD0_9BACT)

HSP 1 Score: 177 bits (448), Expect = 2.400e-50
Identity = 86/175 (49.14%), Postives = 114/175 (65.14%), Query Frame = 0
Query:  189 LVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWI 363
            L+VGLGNPGK+Y+ TRHN GFLV E+LA R G TL    AF G +   S  GK V  LLP+TFMN SG + R+ +D++ L     LI+ D+VAL FG+LR++ KGS GGHNGLK ++ HL T +Y RLR+G+G      G   L ++V+G F   EKK L  +  +A  A+E W+
Sbjct:    7 LIVGLGNPGKKYEMTRHNMGFLVVEKLAERLGATLSPNKAFMGRFGKASIEGKKVYFLLPSTFMNLSGQAVRRCIDYYNLTKERLLIVSDDVALPFGKLRIREKGSAGGHNGLKDVERHLGTQEYQRLRVGVGSN----GDEDLDEYVVGNFNSHEKKLLPEIQIDAALALEEWV 177          
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: A0A429XTI9_9BACI (Peptidyl-tRNA hydrolase n=1 Tax=Siminovitchia acidinfaciens TaxID=2321395 RepID=A0A429XTI9_9BACI)

HSP 1 Score: 175 bits (444), Expect = 5.430e-50
Identity = 90/190 (47.37%), Postives = 127/190 (66.84%), Query Frame = 0
Query:  189 LVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWIEEDDTAKVMTRFNSR 378
            L+VGLGNPG +Y+ TRHN GF V EELA R G TL   + F G Y ++   GK V +L P T+MN SG S R ++D+F++PI + L++ D++ L  G++RL+ KGS GGHNG+KS   HL TP+++R+RIGI   +   G   + D+VLG+F+R E +E+ SV+    DA E W+E     +VM RFNS+
Sbjct:    3 LIVGLGNPGSRYEKTRHNIGFEVIEELANRSGTTLN-ESKFNGLYANVRNNGKKVILLKPLTYMNLSGESIRPLMDYFRIPIENVLVIYDDLDLPVGKIRLRQKGSAGGHNGIKSTIQHLGTPEFNRIRIGI---NRPPGDMKVPDYVLGKFSREEWEEMQSVIQTCADACEEWMEAP-FLEVMNRFNSK 187          
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: A0A7X5Q305_9BACT (Peptidyl-tRNA hydrolase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A7X5Q305_9BACT)

HSP 1 Score: 174 bits (441), Expect = 1.520e-49
Identity = 88/187 (47.06%), Postives = 125/187 (66.84%), Query Frame = 0
Query:  189 LVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLK---IRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWIEEDDTAKVM 372
            L+VGLGNPGK Y  TRHN GF V + LA + G T +   +R   +G     + R K   +LLP T+MN SG++ RK  D++K+PI   +++ D+VAL FGQLRL+A+GS GGHNGL+SI+AHL T +YSRLRIG+   +     G L+D+VL +F++ E++ L  VVA A +A+E W+ E + A + 
Sbjct:    4 LIVGLGNPGKTYDDTRHNVGFRVIKALAAKLGITFRPSLVRA--KGSLSEGNIRDKKAYLLLPLTYMNESGIAVRKCADYYKIPIERVIVVTDDVALPFGQLRLRAQGSCGGHNGLRSIEAHLGTQEYSRLRIGVSNREE----GDLADYVLSKFSQEEQRALPDVVASAIEALELWLTEGNEAAMQ 184          
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Match: A0A2V3IG78_9FLOR (Peptidyl-tRNA hydrolase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG78_9FLOR)

HSP 1 Score: 174 bits (440), Expect = 2.680e-48
Identity = 86/197 (43.65%), Postives = 126/197 (63.96%), Query Frame = 0
Query:  179 PKAPPRGNNLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGT-LKIRTAFQGEYCSISFRGKSVGILLPTTFMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNGLKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDSVVAEACDAVEFWIEEDDTAKVMTR 374
            P  P RGN LLVVGLGNPG ++  TRHN GF + ++ A RH  +  +  ++ QG+        +SV +L P+TFMN SG + R  + +   P+ + L++ D+++LD G +RL+AKGS GGHNGLKSIQ  +   +Y+RLRIG+G      GA   +D VLG F+RSEK+ LD V  +  +A+++W++E    KV T+
Sbjct:   67 PPPPERGNKLLVVGLGNPGPRFDNTRHNVGFTLLDQYAARHSASKFRRESSVQGDVARFHLHDRSVMLLKPSTFMNASGRAVRAALKYIDAPVAALLVVTDDISLDLGDIRLRAKGSAGGHNGLKSIQQCVGGMNYARLRIGVGSPSR--GAEDWADFVLGSFSRSEKQVLDKVEWDVMEAIDYWVDEASIEKVQTQ 261          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIA6_9PHAE8.410e-10778.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSW9_ECTSI5.090e-9277.27Peptidyl-tRNA hydrolase n=1 Tax=Ectocarpus silicul... [more]
A0A4D9CWV7_9STRA1.340e-7160.51Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CKJ3_9STRA2.320e-6359.89Peptidyl-tRNA hydrolase n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ACE0_9RHOD8.920e-5345.50Peptidyl-tRNA hydrolase n=2 Tax=Rhodosorus marinus... [more]
F8L348_SIMNZ7.360e-5147.73Peptidyl-tRNA hydrolase n=1 Tax=Simkania negevensi... [more]
A0A2A4YKD0_9BACT2.400e-5049.14Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Aeropho... [more]
A0A429XTI9_9BACI5.430e-5047.37Peptidyl-tRNA hydrolase n=1 Tax=Siminovitchia acid... [more]
A0A7X5Q305_9BACT1.520e-4947.06Peptidyl-tRNA hydrolase n=1 Tax=Chlamydiae bacteri... [more]
A0A2V3IG78_9FLOR2.680e-4843.65Peptidyl-tRNA hydrolase n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3D3.40.50.1470coord: 184..378
e-value: 8.6E-59
score: 200.3
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 188..376
IPR001328Peptidyl-tRNA hydrolaseTIGRFAMTIGR00447TIGR00447coord: 188..377
e-value: 4.6E-54
score: 180.9
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 189..374
e-value: 5.0E-52
score: 176.3
IPR001328Peptidyl-tRNA hydrolasePANTHERPTHR17224PEPTIDYL-TRNA HYDROLASEcoord: 163..376
IPR001328Peptidyl-tRNA hydrolaseHAMAPMF_00083Pept_tRNA_hydro_bactcoord: 187..368
score: 31.824
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01196PEPT_TRNA_HYDROL_2coord: 294..304
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01195PEPT_TRNA_HYDROL_1coord: 200..213
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..378
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.486

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig128contigF-serratus_M_contig128:93962..96404 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig128.2064.1mRNA_F-serratus_M_contig128.2064.1Fucus serratus malemRNAF-serratus_M_contig128 93382..96435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig128.2064.1 ID=prot_F-serratus_M_contig128.2064.1|Name=mRNA_F-serratus_M_contig128.2064.1|organism=Fucus serratus male|type=polypeptide|length=379bp
MRGQRHFPSVFLVVMSSSYLLRHLAISTQAFVTNTFRSLATTSAGRSARA
TTMPTPNCRPCSKRTRRGQGPREESIWLSSSALPLSFSFAGRHLSSSSTC
RHPITGEGGPTSSSSKFQTSSPRSQSEPAETRAPVSGGAGQGFGVNSGSC
AADPDTSNSAPQRRQTQSERRPNKQQPQPKAPPRGNNLLVVGLGNPGKQY
KFTRHNAGFLVAEELARRHGGTLKIRTAFQGEYCSISFRGKSVGILLPTT
FMNNSGMSARKVVDFFKLPINSALILVDEVALDFGQLRLKAKGSPGGHNG
LKSIQAHLKTPDYSRLRIGIGGEDHACGAGPLSDHVLGEFTRSEKKELDS
VVAEACDAVEFWIEEDDTAKVMTRFNSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036416Pept_tRNA_hydro_sf
IPR001328Pept_tRNA_hydro
IPR018171Pept_tRNA_hydro_CS