prot_F-serratus_M_contig929.20678.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig929.20678.1
Unique Nameprot_F-serratus_M_contig929.20678.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length261
Homology
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: D7G0F3_ECTSI (Putative RNA-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F3_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 3.550e-25
Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 0
Query:   52 QQAFMAPMPVQLPAHLSMINPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRESNRSNSGKG 132
            QQAFM PMPVQLPAH+S+IN  +FDP+ AA+EGTRFFV+KT+SED+IHRS+K  VWSG E +NRRLDA ++     +SGKG
Sbjct:  102 QQAFMMPMPVQLPAHVSLINAPSFDPEAAAVEGTRFFVMKTFSEDDIHRSVKLSVWSGGEATNRRLDAAFKGIKPKDSGKG 182          
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: A0A6H5KE00_9PHAE (YTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE00_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 2.960e-24
Identity = 53/80 (66.25%), Postives = 66/80 (82.50%), Query Frame = 0
Query:   53 QAFMAPMPVQLPAHLSMINPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRESNRSNSGKG 132
            QAFM PMPVQLPAH+S+IN  +FDP+ AA+EGTRFFV+KT+SED+IHRS+K  VWSG E +NRRLDA ++     +SGKG
Sbjct:  599 QAFMMPMPVQLPAHVSLINAPSFDPEAAAVEGTRFFVMKTFSEDDIHRSVKLSVWSGGEATNRRLDAAFKGIKPKDSGKG 678          
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: A0A7R8V4X5_HERIL (Hypothetical protein (Fragment) n=3 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8V4X5_HERIL)

HSP 1 Score: 72.4 bits (176), Expect = 9.180e-11
Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 0
Query:   71 NPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRESNRSN 128
            NP   D DTAA    RFFVIK+YSED+IHRSIKYG+W   EH N+RLD  +RE    N
Sbjct:  446 NPAELDLDTAA--NARFFVIKSYSEDDIHRSIKYGIWCSTEHGNKRLDQAFREREAEN 501          
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: E0VFT2_PEDHC (YTH domain protein, putative n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0VFT2_PEDHC)

HSP 1 Score: 71.6 bits (174), Expect = 1.360e-10
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:   71 NPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRESNRSNSG 130
            NP  FD +    +G RFFVIK+YSED+IHRSIKY +W   EH N+RLD  +RES ++ SG
Sbjct:  259 NPSEFDMNC---KGARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAFRESEKNGSG 315          
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: UPI0004CCAE6B (YTH domain-containing family protein 3 isoform X1 n=3 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CCAE6B)

HSP 1 Score: 71.2 bits (173), Expect = 2.160e-10
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   71 NPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRESNR 126
            NPG FD  TA   G RFFVIK+YSED+IHRSIKY +W   EH N+RLD  ++E+NR
Sbjct:  457 NPGEFD-QTAP--GARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAFKEANR 509          
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: UPI001D01BDDE (YTH domain-containing family protein 3-like isoform X1 n=9 Tax=Cotesia glomerata TaxID=32391 RepID=UPI001D01BDDE)

HSP 1 Score: 71.2 bits (173), Expect = 2.200e-10
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   71 NPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRESNR 126
            NPG FD  TA   G RFFVIK+YSED+IHRSIKY +W   EH N+RLD  ++E+NR
Sbjct:  487 NPGEFD-QTAP--GARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAFKEANR 539          
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: F4W6C6_ACREC (YTH domain family protein 2 n=1 Tax=Acromyrmex echinatior TaxID=103372 RepID=F4W6C6_ACREC)

HSP 1 Score: 68.9 bits (167), Expect = 3.260e-10
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   71 NPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRESNR 126
            NP  FD    A  G RFFVIK+YSED+IHRSIKY +W   EH N+RLD  +RE++R
Sbjct:   17 NPVEFD---QAAPGARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREASR 69          
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: A0A6L5CZ83_9INSE (YTH domain-containing protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CZ83_9INSE)

HSP 1 Score: 70.5 bits (171), Expect = 3.580e-10
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
Query:   71 NPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRE 123
            NPG++D    + +G RFFVIK+YSED+IHRSIKY +W   EH N+RLDA +RE
Sbjct:  349 NPGDYD---LSAKGARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDAAFRE 398          
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: A0A6H5I7I2_9HYME (YTH domain-containing protein n=2 Tax=Trichogramma TaxID=7490 RepID=A0A6H5I7I2_9HYME)

HSP 1 Score: 70.1 bits (170), Expect = 5.380e-10
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 0
Query:   71 NPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRESNRSNS 129
            NP +FD  TA   G RFFVIK+YSED+IHRSIKY +W   EH N+RLD  +R++NR  S
Sbjct:  446 NPTDFD-QTAP--GARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDMAYRDANREGS 501          
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Match: UPI001D0793E9 (YTH domain-containing family protein 3-like n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D0793E9)

HSP 1 Score: 70.1 bits (170), Expect = 5.790e-10
Identity = 35/67 (52.24%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   71 NPGNFDPDTAAIEGTRFFVIKTYSEDEIHRSIKYGVWSGAEHSNRRLDAVWRESNRSNSGKGNTGAA 137
            NP  FD       G RFFVIK+YSED+IHRSIKY +W   EH N+RLD  +RE  R    +G T  A
Sbjct:  657 NPSKFD---LTAPGARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYRERERERELQGGTSTA 720          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig929.20678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0F3_ECTSI3.550e-2566.67Putative RNA-binding protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KE00_9PHAE2.960e-2466.25YTH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7R8V4X5_HERIL9.180e-1160.34Hypothetical protein (Fragment) n=3 Tax=Hermetia i... [more]
E0VFT2_PEDHC1.360e-1056.67YTH domain protein, putative n=1 Tax=Pediculus hum... [more]
UPI0004CCAE6B2.160e-1062.50YTH domain-containing family protein 3 isoform X1 ... [more]
UPI001D01BDDE2.200e-1062.50YTH domain-containing family protein 3-like isofor... [more]
F4W6C6_ACREC3.260e-1058.93YTH domain family protein 2 n=1 Tax=Acromyrmex ech... [more]
A0A6L5CZ83_9INSE3.580e-1060.38YTH domain-containing protein n=1 Tax=Ephemera dan... [more]
A0A6H5I7I2_9HYME5.380e-1059.32YTH domain-containing protein n=2 Tax=Trichogramma... [more]
UPI001D0793E95.790e-1052.24YTH domain-containing family protein 3-like n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.590.10coord: 70..131
e-value: 1.8E-12
score: 48.9
NoneNo IPR availablePANTHERPTHR12357YTH YT521-B HOMOLOGY DOMAIN-CONTAININGcoord: 69..126
NoneNo IPR availablePANTHERPTHR12357:SF15METHYLATED RNA-BINDING PROTEIN 1coord: 69..126
NoneNo IPR availableTMHMMTMhelixcoord: 24..46
IPR007275YTH domainPFAMPF04146YTHcoord: 85..148
e-value: 1.6E-6
score: 28.2
IPR007275YTH domainPROSITEPS50882YTHcoord: 85..221
score: 10.967

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig929contigF-serratus_M_contig929:338435..342396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig929.20678.1mRNA_F-serratus_M_contig929.20678.1Fucus serratus malemRNAF-serratus_M_contig929 338435..342480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig929.20678.1 ID=prot_F-serratus_M_contig929.20678.1|Name=mRNA_F-serratus_M_contig929.20678.1|organism=Fucus serratus male|type=polypeptide|length=261bp
MQNAGSYGGSGGNGMMMNNVSVDAAAAAAAAFAGGGSMFFPNVAAQQAAM
MQQAFMAPMPVQLPAHLSMINPGNFDPDTAAIEGTRFFVIKTYSEDEIHR
SIKYGVWSGAEHSNRRLDAVWRESNRSNSGKGNTGAADASGAKGKGGASA
TAAATDKVNSASNCEESKEEQTKVQKEGTSGNEEAKTGSSTEEASKDGSV
VGTKGRQEGEVRSGPDGGREEARRSNGEKVVKEIKQEGEGDEEDSASCAD
VAGGGGGGVDK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007275YTH_domain