prot_F-serratus_M_contig128.2085.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig128.2085.1
Unique Nameprot_F-serratus_M_contig128.2085.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length133
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig128.2085.1 vs. uniprot
Match: A0A6H5KN12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN12_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 6.600e-17
Identity = 58/124 (46.77%), Postives = 71/124 (57.26%), Query Frame = 0 
Query:   26 EATTGVMVNGYWFPSLEAAAEAPASNGFDFSEAVEVAASVE---RERQEHVEAERRRQARATR--GVDFSCGAVLLSAPTPFD--APEVSGDAVAAELGTRTTQ----------PLWRRLAMSV 132
            E   GVMVNGYWFPSL+AAA+APA  GFDF+EA   AA      +ER+  ++A +RR A   R  GVDF+CGAVLLS P   D     V+GD      G R  +          PLWRR  ++V
Sbjct:  184 ETVAGVMVNGYWFPSLDAAAKAPAGKGFDFAEAAANAAXXXXRAKERRRKMQAAKRRAAELARPKGVDFTCGAVLLSCPARHDNSGEGVAGDDDGVLEGVRQEEEEEKKGAVRLPLWRRWTVTV 307
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KN12_9PHAE6.600e-1746.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig128contigF-serratus_M_contig128:674207..675121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig128.2085.1mRNA_F-serratus_M_contig128.2085.1Fucus serratus malemRNAF-serratus_M_contig128 674207..675123 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig128.2085.1 ID=prot_F-serratus_M_contig128.2085.1|Name=mRNA_F-serratus_M_contig128.2085.1|organism=Fucus serratus male|type=polypeptide|length=133bp
TRDAVRKVQSPHRLKPSSSSTSEEGEATTGVMVNGYWFPSLEAAAEAPAS
NGFDFSEAVEVAASVERERQEHVEAERRRQARATRGVDFSCGAVLLSAPT
PFDAPEVSGDAVAAELGTRTTQPLWRRLAMSVS
back to top