prot_F-serratus_M_contig923.20634.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig923.20634.1
Unique Nameprot_F-serratus_M_contig923.20634.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length165
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig923.20634.1 vs. uniprot
Match: D7G1W1_ECTSI (Carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1W1_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.320e-27
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 0 
Query:   52 VFVDMSPPDTSQLV---EEQRRVLLLSERRSGAGTGGKVFNAYPNIFYVGDPCRMGGGPEALFGGVCSMMVSRLLAYQPTTDDVRNLYSFSFIVEQ 144
            V  D + PD SQL    ++QRRVLLLSE+RSG    G V NA   +FYV DPCRMGGGPEAL  G CS+ V+RLLA QPTT+D+RNL+SFS+IVE+
Sbjct:  180 VLQDDTSPDLSQLATTGKKQRRVLLLSEKRSGGHAVGGVLNADTRVFYVADPCRMGGGPEALDAGACSLAVTRLLACQPTTNDIRNLFSFSYIVER 275
[Close]
BLAST of mRNA_F-serratus_M_contig923.20634.1 vs. uniprot
Match: A0A835ZGF5_9STRA (HEAT repeat-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF5_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.200e-10
Identity = 48/167 (28.74%), Postives = 81/167 (48.50%), Query Frame = 0 
Query:    2 GLFLLNPRASEMVAADMGHFRNTI----EQLENVLKESMGKHGKYISIVMRQLGVFVDMSPP---------DTSQL------------------VEEQRRVLLLSERRSGAGTGGKVFNAYPNIFYVGDPCRMGG-GPEALFGGVCSMMVSRLLAYQPTTDDVRNLY 136
            G+  L PR  EM+ AD+   R T+    E++E + K    +    I+ + +    F ++S            T ++                  V EQ+R+L++SE RSG+   G++FN+   +FY+ +PC+ GG G  AL+   C  ++ RLL  +PT  DV N++
Sbjct:  152 GMKSLTPRTFEMLTADISDLRKTVVALKEEMEGIRKSPPAQANSNIAALAKP--AFEELSGRYQKLQQDMMSTKEMLMATAEALVAGRGRGAGAVAEQKRLLIVSEPRSGSTQFGELFNSNEQLFYLFEPCKGGGDGGTALYDEACGYLLQRLLECEPTVKDVDNMF 316
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig923.20634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1W1_ECTSI1.320e-2762.50Carbohydrate (N-acetylglucosamine 6-O) sulfotransf... [more]
A0A835ZGF5_9STRA1.200e-1028.74HEAT repeat-containing protein 1 n=1 Tax=Tribonema... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig923contigF-serratus_M_contig923:139999..141416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig923.20634.1mRNA_F-serratus_M_contig923.20634.1Fucus serratus malemRNAF-serratus_M_contig923 139999..141417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig923.20634.1 ID=prot_F-serratus_M_contig923.20634.1|Name=mRNA_F-serratus_M_contig923.20634.1|organism=Fucus serratus male|type=polypeptide|length=165bp
LGLFLLNPRASEMVAADMGHFRNTIEQLENVLKESMGKHGKYISIVMRQL
GVFVDMSPPDTSQLVEEQRRVLLLSERRSGAGTGGKVFNAYPNIFYVGDP
CRMGGGPEALFGGVCSMMVSRLLAYQPTTDDVRNLYSFSFIVEQVVPRVS
RPELSVTFLLFVRDP
back to top