prot_F-serratus_M_contig1279.2057.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1279.2057.1
Unique Nameprot_F-serratus_M_contig1279.2057.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length493
Homology
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BLAST of mRNA_F-serratus_M_contig1279.2057.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 6.300e-14
Identity = 44/77 (57.14%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:   31 CSNGFPGIESSGVCCVEDCGQCGDTGCSSIE-GYSEDDCCTSNILENNELCADKGAAPCVIETDEGNISTPPSAAPT 106
            CSNGFPGIE SG CCV DCG CG +GCSS E G + DDCCT NIL+    C+  G APC ++ D    STP  + PT
Sbjct:   21 CSNGFPGIEKSGACCVSDCGTCGGSGCSSRESGLTGDDCCTKNILKQGAPCSATGHAPCFLDGD----STPSKSTPT 93
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BLAST of mRNA_F-serratus_M_contig1279.2057.1 vs. uniprot
Match: D7FY01_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY01_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.720e-11
Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 0 
Query:   31 CSNGFPGIESSGVCCVEDCGQCGDTGCSSIEGYSEDDCCTSNILENNELCADKGAAPCVIETDE 94
            CSNG  G E+SG CC   CG CG  GCS + G   + CCTSNI+   E C++KGAAPC+++TD+
Sbjct:  381 CSNGLAGYENSGACCSVGCGTCGGEGCSQL-GEGAESCCTSNIIAAREPCSEKGAAPCIMDTDQ 443
[Close]
BLAST of mRNA_F-serratus_M_contig1279.2057.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 8.200e-11
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 0 
Query:   31 CSNGFPGIESSG--VCCVEDCGQCGDTGCSSIEGYSEDDCCTSNILENNELCADKGAAPCVIETDEGNIST 99
            CSNGFPGIE+    VCC   C  CG + C ++ G +  DCCT  I+ N+ELC++KG+APCV++  E   ST
Sbjct:  171 CSNGFPGIENEDATVCCDPACVVCGGSTCGNVAGLTGADCCTGTIIANDELCSEKGSAPCVVDPPEVTAST 241
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1279.2057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRN0_ECTSI6.300e-1457.14Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FY01_ECTSI2.720e-1153.13Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D8LG71_ECTSI8.200e-1149.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 452..457
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 388..411
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 266..283
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 226..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 431..451
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 458..477
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 356..376
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..206
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 284..355
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 478..492
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..387
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 412..430
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.912
NoneNo IPR availableTMHMMTMhelixcoord: 356..378
NoneNo IPR availableTMHMMTMhelixcoord: 156..175
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 390..412
NoneNo IPR availableTMHMMTMhelixcoord: 205..227
NoneNo IPR availableTMHMMTMhelixcoord: 237..254
NoneNo IPR availableTMHMMTMhelixcoord: 261..283
NoneNo IPR availableTMHMMTMhelixcoord: 427..449
NoneNo IPR availableTMHMMTMhelixcoord: 456..478

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1279contigF-serratus_M_contig1279:209719..212092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1279.2057.1mRNA_F-serratus_M_contig1279.2057.1Fucus serratus malemRNAF-serratus_M_contig1279 194788..212521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1279.2057.1 ID=prot_F-serratus_M_contig1279.2057.1|Name=mRNA_F-serratus_M_contig1279.2057.1|organism=Fucus serratus male|type=polypeptide|length=493bp
MASRLRACWAVVAIFILLHLAGHASGQGLFCSNGFPGIESSGVCCVEDCG
QCGDTGCSSIEGYSEDDCCTSNILENNELCADKGAAPCVIETDEGNISTP
PSAAPTPDPTQPMETRTSSPISSPTPQPAAGVTMPAAESSASGSATIPWS
LQDTEAWMMYFALCITVLNLANLWFHTRLRARRARGQTPEDIASRSSFQS
KAELHRYFILAAFAFEIGQGIVVTFLVDDSLEESVHAMVYVVFGVVVTSS
SVLLRRAGRHWQAAMANAALEGIFVALTLGFFVKPSKGSTALLVLLGVNE
AAIGLAIHLQVGYHPTSSVASQWARRVLGGGEAEQVPARDFDVYNQTSSA
DLRQELILSMLELTGNVLLPVILILLQPQFRPRSPWRSDVVTAWWVTCTL
LIFTVSLTHLLPPGRYSAYGRGGPTFVSATLNSTFVVSALACLVLLVVVI
LREDDVPVVDFVWFSGVILGCIVGAYASHRWNMRTFWNQVIS*
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