mRNA_F-serratus_M_contig919.20583.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig919.20583.1
Unique NamemRNA_F-serratus_M_contig919.20583.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 355 bits (910), Expect = 8.750e-107
Identity = 191/428 (44.63%), Postives = 265/428 (61.92%), Query Frame = 1
Query:   10 GPSGLRYSHLQAALCDKLVEDLAAFATLVFSSRVLPQVFWTLHTSTNLSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYARESPKLLFALDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKEFRANPPVPGARAVSFIDDITVILPPERSLDAAAIGK--------------------------------------RVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII------AEEVAHDPTVCQNQTY----LGHEALRQAHLPIREGGLGLTSSSSIKGAAY 1149
            GPSGLR+S LQ++L  +L E +A   +++F    LP  FW LHTS NLSA+G K RP+A GD+ RR++  V CR+YG  LA++F+P GQYGVAV GG E++A  A L+ ++G  +L+YD  NAFNS+ R   LPALA+++P ++PYA+N+YARE PKLL+  D G   V+ SA GVQQGCNLGPLCYSAG LK+L++FRANPPV GA+ ++FIDD+ V+LP   + + AA                                         R  ++ T L V   GMR+VGVPVG   + +    +   GEP +L++ +A ++DAQAS QILR SA +RL+ LLR++PP +T +AA+ +D  VE  L +I+       E   H+PT   + +     L    +RQA LP+REGGLG+ S+  I G A+
Sbjct: 1177 GPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPSTVDISGPAF 1603          
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 7.050e-105
Identity = 197/434 (45.39%), Postives = 254/434 (58.53%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAA-LCDKLVEDLAAFATLVFS-SRVLPQVFWTLHTSTNLSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYARESPKLLFALDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKEFRANPPVPGARAVSFIDDITVILPP--ERSLDAAAIGKRVAMD------------------------------------TTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAEEVAHD---PTVCQNQT--------YLGHEALRQAHLPIREGGLGLTSSSSIKGAAY 1149
            SA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTS NLSALG+K RP+A G VLRR+I   FC +Y   +A+ F+   Q+G  V GGVEI+A TA LS ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP   R++ A A       D                                     TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+  ++A+    PTV + +         +    A  Q HLPIREGGLG+TSS  I+ +A+
Sbjct:  136 SAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 569          
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 3.110e-103
Identity = 191/435 (43.91%), Postives = 254/435 (58.39%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAA-LCDKLVEDLAAFATLVFS-SRVLPQVFWTLHTSTNLSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYARESPKLLFALDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKEFRANPPVPGARAVSFIDDITVILPPERSLDAAAIG--------------------------------------KRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII------------AEEVAHDPTVCQNQTYLGHEALRQAHLPIREGGLGLTSSSSIKGAAY 1149
            SA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTS NLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA LS ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + +  AI                                       ++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+             +EV  DPT  +   +    A  Q HLP+REGGLG+TS+  I+ +A+
Sbjct:  136 SAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 8.380e-102
Identity = 191/435 (43.91%), Postives = 254/435 (58.39%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAA-LCDKLVEDLAAFATLVFS-SRVLPQVFWTLHTSTNLSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYARESPKLLFALDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKEFRANPPVPGARAVSFIDDITVILPPERSLDAAAIG--------------------------------------KRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII------------AEEVAHDPTVCQNQTYLGHEALRQAHLPIREGGLGLTSSSSIKGAAY 1149
            SA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTS NLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA LS ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + +  AI                                       ++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+             +EV  DPT  +   +    A  Q HLP+REGGLG+TS+  I+ +A+
Sbjct:  136 SAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 2.010e-98
Identity = 183/417 (43.88%), Postives = 239/417 (57.31%), Query Frame = 1
Query:   49 LCDKLVEDLAAFATLVFS-SRVLPQVFWTLHTSTNLSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYARESPKLLFALDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKEFRANPPVPGARAVSFIDDITVILPP--ERSLDAAAIGKRVAMD------------------------------------TTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAEEVAHD---PTVCQ--------NQTYLGHEALRQAHLPIREGGLGLTSSSSIKGAAY 1149
            + D   E LA F+  VF     LP  FW LHTS NLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA LS ++G TILS+DG NA+NS+ R   LPA+A   P +  Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP   R++ A A       D                                     TGL+V   GM +VGVPVGTE FQR F+     G PAEL+  L+ ++D Q S+Q+LR+S   RL HLLRT+ PSIT  AA  +D+L+ WA++ I+  ++A+    PTV +           +    A  Q HLPIREGGLG+TSS  I+ +A+
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 417          
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 1.270e-93
Identity = 178/418 (42.58%), Postives = 240/418 (57.42%), Query Frame = 1
Query:   49 LCDKLVEDLAAFATLVFS-SRVLPQVFWTLHTSTNLSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYARESPKLLFALDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKEFRANPPVPGARAVSFIDDITVILPPERSLDAAAIG--------------------------------------KRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASII------------AEEVAHDPTVCQNQTYLGHEALRQAHLPIREGGLGLTSSSSIKGAAY 1149
            + D   E LA F+  VF     LP   W LHTS NLSALG+K RP+A G VLRR+I   F R+Y   +A+ F+   Q+G  V GGVEI+A TA LS ++G TILS+DG NA+NS+ R   LPA+A + P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + +  AI                                       ++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+             +EV  DPT  +   +    A  Q HLP+REGGLG+TS+  I+ +A+
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 418          
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 3.330e-66
Identity = 121/236 (51.27%), Postives = 153/236 (64.83%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAA-LCDKLVEDLAAFATLVFS-SRVLPQVFWTLHTSTNLSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYARESPKLLFALDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKEFRANPPVPGARAVSFIDDITVILPPERSLDAAAI 702
            SA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTS NLSALG+K RP+A G VLRR+I   FCR+Y   +A+ F+   Q+G  V GGVEI+A TA LS ++G TILS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + +  AI
Sbjct:  136 SAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAI 371          
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.780e-49
Identity = 109/268 (40.67%), Postives = 147/268 (54.85%), Query Frame = 1
Query:  493 LDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKEFRANPPVPGARAVSFIDDITVILPP--ERSLDAAAIGKRVAMD------------------------------------TTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAEEVAHD---PTVCQNQT--------YLGHEALRQAHLPIREGGLGLTSSSSIKGAAY 1149
            ++ G  E+V+S RGVQQGCNLG   +S G L  +KEF   PPVPGA+ + ++DD+ V LPP   R++ A A       D                                     TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+  ++A+    PTV + +         +    A  Q HLPIREGGLG+TSS  I+ +A+
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 268          
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 8.660e-42
Identity = 84/166 (50.60%), Postives = 107/166 (64.46%), Query Frame = 1
Query:   49 LCDKLVEDLAAFATLVFS-SRVLPQVFWTLHTSTNLSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYARESPKLLFALDGGGSEVVKSARGVQQ 543
            + D   E LA F+  VF     LP +FW   TS +LSALG+K RP+A G VLRR+I   FCR+Y + +AD F+   Q+G  V GGVEI+A TA LS ++G TILS+DG NA+NSI R   L A+A   P +V Y  NLYAR   KLLF ++ G  E+V+S R VQQ
Sbjct:    1 MSDDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAKLLFKMEDGSIEMVRSQREVQQ 166          
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.370e-39
Identity = 118/370 (31.89%), Postives = 182/370 (49.19%), Query Frame = 1
Query:    1 SAAGPSGLRYSHLQAALCDKLV-EDLAA-----FATLVFSSRVLPQVFWTLHTSTNLSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGGVEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYARESPKLLFALDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKEFRANPPVPGARAVSFIDDITVILPP--ERSLDA--------AAIG---------------------KRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDF-LKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAANYDALVEWAL 996
            S AG  G R+SHL++    K+  ED        +  LV      P  FWTL   ++L ALG+K RPV  G   RR+I A   R++  KL + F+   Q+GVAV+GGVE +A+ A L  + G  I+  D +NAFN+  R   +   A+ +P +V Y +  Y       ++ +D G    ++   GVQQG  +GP  +S   + I+ + +      G    +++DDIT+ L    E S+ A        A +G                     +R  ++  GLTV  +G+ VVGVP+GT+ + R+F +K    G   +L R L  M D Q +  I  LS   R +++ R + P++T +A    D +V+WAL
Sbjct:  554 SGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWAL 923          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig919.20583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN8.750e-10744.63Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KGJ4_9PHAE7.050e-10545.39Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE3.110e-10343.91Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE8.380e-10243.91Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE2.010e-9843.88Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE1.270e-9342.58Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ62_9PHAE3.330e-6651.27Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K541_9PHAE1.780e-4940.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L3H3_9PHAE8.660e-4250.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH58_9PHAE1.370e-3931.89Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig919contigF-serratus_M_contig919:147074..148372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.7
Seed ortholog evalue7.7e-22
Seed eggNOG ortholog400682.PAC_15702057
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ribonuclease H protein
EggNOG OGsKOG1075@1,KOG1075@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1149
Cds size1149
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig919.20583.1prot_F-serratus_M_contig919.20583.1Fucus serratus malepolypeptideF-serratus_M_contig919 147074..148372 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932661.6500657-CDS-F-serratus_M_contig919:147073..1472101622932661.6500657-CDS-F-serratus_M_contig919:147073..147210Fucus serratus maleCDSF-serratus_M_contig919 147074..147210 -
1690964409.8996792-CDS-F-serratus_M_contig919:147073..1472101690964409.8996792-CDS-F-serratus_M_contig919:147073..147210Fucus serratus maleCDSF-serratus_M_contig919 147074..147210 -
1622932661.670811-CDS-F-serratus_M_contig919:147246..1475501622932661.670811-CDS-F-serratus_M_contig919:147246..147550Fucus serratus maleCDSF-serratus_M_contig919 147247..147550 -
1690964409.9096253-CDS-F-serratus_M_contig919:147246..1475501690964409.9096253-CDS-F-serratus_M_contig919:147246..147550Fucus serratus maleCDSF-serratus_M_contig919 147247..147550 -
1622932661.6855407-CDS-F-serratus_M_contig919:147664..1483721622932661.6855407-CDS-F-serratus_M_contig919:147664..148372Fucus serratus maleCDSF-serratus_M_contig919 147665..148372 -
1690964409.9222186-CDS-F-serratus_M_contig919:147664..1483721690964409.9222186-CDS-F-serratus_M_contig919:147664..148372Fucus serratus maleCDSF-serratus_M_contig919 147665..148372 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig919.20583.1

>prot_F-serratus_M_contig919.20583.1 ID=prot_F-serratus_M_contig919.20583.1|Name=mRNA_F-serratus_M_contig919.20583.1|organism=Fucus serratus male|type=polypeptide|length=383bp
SAAGPSGLRYSHLQAALCDKLVEDLAAFATLVFSSRVLPQVFWTLHTSTN
LSALGQKARPVACGDVLRRVIDAVFCRRYGRKLADYFQPWGQYGVAVSGG
VEIMALTATLSFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSVVPYA
SNLYARESPKLLFALDGGGSEVVKSARGVQQGCNLGPLCYSAGALKILKE
FRANPPVPGARAVSFIDDITVILPPERSLDAAAIGKRVAMDTTGLTVVRQ
GMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLS
ATSRLSHLLRTVPPSITGQAAANYDALVEWALASIIAEEVAHDPTVCQNQ
TYLGHEALRQAHLPIREGGLGLTSSSSIKGAAY
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mRNA from alignment at F-serratus_M_contig919:147074..148372-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig919.20583.1 ID=mRNA_F-serratus_M_contig919.20583.1|Name=mRNA_F-serratus_M_contig919.20583.1|organism=Fucus serratus male|type=mRNA|length=1299bp|location=Sequence derived from alignment at F-serratus_M_contig919:147074..148372- (Fucus serratus male)
AGCGCGGCAGGTCCGTCTGGACTACGCTACAGTCATCTGCAGGCTGCGCT GTGCGATAAACTGGTTGAGGATCTCGCGGCGTTCGCGACGCTTGTTTTTT CCAGCCGTGTTTTGCCTCAAGTGTTCTGGACACTGCACACGAGCACTAAC CTTTCCGCGTTGGGGCAAAAGGCGAGACCAGTGGCGTGCGGCGATGTATT GCGGAGAGTAATTGACGCTGTTTTCTGCCGCCGATACGGCAGGAAGCTGG CAGACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCAGTTTCAGGCGGA GTAGAGATAATGGCGCTCACTGCAACACTGAGTTTCGAAGAGGGTTGTAC CATTCTCTCATACGACGGAGCAAACGCCTTCAACAGTATATACCGCCACA GGTTCCTGCCCGCGCTAGCCGAAATCGTCCCCTCAGTGGTCCCCTACGCA TCAAACCTGTACGCACGGGAATCCCCAAAACTCCTGTTTGCACTAGACGG TGGAGGTTCGGAAGTGGTCAAGTCAGCACGGGGAGTACAGCAAGGATGTA ATCTAGGTCCACTTTGCTACAGCGCAGGCGCACTGAAGATCCTAAAAGAA TTCAGGGCCAACCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGA CGATATCACGGTCATTCTTCCACCTGAACGTTCTCTCGATGCGGCAGCTA TAGGGAAAGTTACGGAATGGCTACAGGAGCGCCTGGGGATATAAGGTATC TCGCTGAACCGAAGGAAATCGCAGGCCCTGCTGGCAGATGGAGTGGGGCC AGAACAGCTGACGGAAGAGCAGCGAGTGGCAATGGATACCACAGGGCTTA CGGTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAGTTGGAACAGAA CAGTTCCAGCGTGATTTCTTAAAGGAGGCGGTTAATGGAGAGCCAGCTGA GCTCGTGAGGGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTTTCAGA TTTTGCGTCTATCCGCCACTTCTCGCCTCTCACATCTGCTCCGAACAGTC CCGCCCTCCATCACAGGCCAAGCTGCAGCAAATTATGACGCTTTGGTGGA GTGGGCGCTGGCGTCTATCATAGCCGGTGACGGAGCTGCCGCGGCAGGGC TACCAACGCCAGAGGAAGTAGCCCACGATCCCACTGTGTGCCAAAATCAG ACATACCTGGGGCATGAGGCCCTACGACAGGCCCACCTACCAATCCGAGA AGGCGGCCTTGGGCTTACCAGCAGTAGCTCCATCAAAGGCGCGGCATAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig919:147074..148372-

>mRNA_F-serratus_M_contig919.20583.1 ID=mRNA_F-serratus_M_contig919.20583.1|Name=mRNA_F-serratus_M_contig919.20583.1|organism=Fucus serratus male|type=CDS|length=2298bp|location=Sequence derived from alignment at F-serratus_M_contig919:147074..148372- (Fucus serratus male)
AGCGCGGCAGGTCCGTCTGGACTACGCTACAGTCATCTGCAGGCTGCGCT
GTGCGATAAACTGGTTGAGGATCTCGCGGCGTTCGCGACGCTTGTTTTTT
CCAGCCGTGTTTTGCCTCAAGTGTTCTGGACACTGCACACGAGCACTAAC
CTTTCCGCGTTGGGGCAAAAGGCGAGACCAGTGGCGTGCGGCGATGTATT
GCGGAGAGTAATTGACGCTGTTTTCTGCCGCCGATACGGCAGGAAGCTGG
CAGACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCAGTTTCAGGCGGA
GTAGAGATAATGGCGCTCACTGCAACACTGAGTTTCGAAGAGGGTTGTAC
CATTCTCTCATACGACGGAGCAAACGCCTTCAACAGTATATACCGCCACA
GGTTCCTGCCCGCGCTAGCCGAAATCGTCCCCTCAGTGGTCCCCTACGCA
TCAAACCTGTACGCACGGGAATCCCCAAAACTCCTGTTTGCACTAGACGG
TGGAGGTTCGGAAGTGGTCAAGTCAGCACGGGGAGTACAGCAAGGATGTA
ATCTAGGTCCACTTTGCTACAGCGCAGGCGCACTGAAGATCCTAAAAGAA
TTCAGGGCCAACCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGA
CGATATCACGGTCATTCTTCCACCTGAACGTTCTCTCGATGCGGCAGCTA
TAGGGAAAAGCGCGGCAGGTCCGTCTGGACTACGCTACAGTCATCTGCAG
GCTGCGCTGTGCGATAAACTGGTTGAGGATCTCGCGGCGTTCGCGACGCT
TGTTTTTTCCAGCCGTGTTTTGCCTCAAGTGTTCTGGACACTGCACACGA
GCACTAACCTTTCCGCGTTGGGGCAAAAGGCGAGACCAGTGGCGTGCGGC
GATGTATTGCGGAGAGTAATTGACGCTGTTTTCTGCCGCCGATACGGCAG
GAAGCTGGCAGACTACTTCCAGCCCTGGGGCCAGTACGGCGTAGCAGTTT
CAGGCGGAGTAGAGATAATGGCGCTCACTGCAACACTGAGTTTCGAAGAG
GGTTGTACCATTCTCTCATACGACGGAGCAAACGCCTTCAACAGTATATA
CCGCCACAGGTTCCTGCCCGCGCTAGCCGAAATCGTCCCCTCAGTGGTCC
CCTACGCATCAAACCTGTACGCACGGGAATCCCCAAAACTCCTGTTTGCA
CTAGACGGTGGAGGTTCGGAAGTGGTCAAGTCAGCACGGGGAGTACAGCA
AGGATGTAATCTAGGTCCACTTTGCTACAGCGCAGGCGCACTGAAGATCC
TAAAAGAATTCAGGGCCAACCCACCGGTGCCAGGAGCGAGAGCGGTTTCG
TTCATCGACGATATCACGGTCATTCTTCCACCTGAACGTTCTCTCGATGC
GGCAGCTATAGGGAAACGAGTGGCAATGGATACCACAGGGCTTACGGTGG
TCCGACAGGGGATGAGGGTTGTGGGAGTACCAGTTGGAACAGAACAGTTC
CAGCGTGATTTCTTAAAGGAGGCGGTTAATGGAGAGCCAGCTGAGCTCGT
GAGGGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTTTCAGATTTTGC
GTCTATCCGCCACTTCTCGCCTCTCACATCTGCTCCGAACAGTCCCGCCC
TCCATCACAGGCCAAGCTGCAGCAAATTATGACGCTTTGGTGGAGTGGGC
GCTGGCGTCTATCATAGCCGCGAGTGGCAATGGATACCACAGGGCTTACG
GTGGTCCGACAGGGGATGAGGGTTGTGGGAGTACCAGTTGGAACAGAACA
GTTCCAGCGTGATTTCTTAAAGGAGGCGGTTAATGGAGAGCCAGCTGAGC
TCGTGAGGGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTTTCAGATT
TTGCGTCTATCCGCCACTTCTCGCCTCTCACATCTGCTCCGAACAGTCCC
GCCCTCCATCACAGGCCAAGCTGCAGCAAATTATGACGCTTTGGTGGAGT
GGGCGCTGGCGTCTATCATAGCCGAGGAAGTAGCCCACGATCCCACTGTG
TGCCAAAATCAGACATACCTGGGGCATGAGGCCCTACGACAGGCCCACCT
ACCAATCCGAGAAGGCGGCCTTGGGCTTACCAGCAGTAGCTCCATCAAAG
GCGCGGCATATAGGAAGTAGCCCACGATCCCACTGTGTGCCAAAATCAGA
CATACCTGGGGCATGAGGCCCTACGACAGGCCCACCTACCAATCCGAGAA
GGCGGCCTTGGGCTTACCAGCAGTAGCTCCATCAAAGGCGCGGCATAT
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