mRNA_F-serratus_M_contig1279.2051.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: A0A6H5KYY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY1_9PHAE) HSP 1 Score: 276 bits (706), Expect = 5.500e-77 Identity = 172/343 (50.15%), Postives = 201/343 (58.60%), Query Frame = 1
Query: 58 MPNWLASELCMLVSFSLGAWKTFKALKKGGADYNLLKTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVPESNMSTVLFERVVVWGMGNAHHVLNNLVVPNVVEFVVYLPWRLLHVVFPTSPATALSSTQGDGGLGARAHGGSIRRISGSRNKE---GAGLAARLQHLKAPTKTRIAVPDDVAKDSRQGRSLRSLRASRRGQGNGTIDSPSPVRPSPPVPPEPQTDAALEGQAPAKGLARSGASGGK-------DSSSEGDHLVGSEGSPPVAA------------------RGVGGGRAGRRRSFGEIVRATLTGDSQTRLRDHLFDLHTASPAPP 1002
MPNWLASELCM+ SFSLGAWKTFK LK GG DYNLLKTWCLL L+R FEEY EFLVSWIPFYWLGKC GL LL +P N+ TVLFERVVVWGM NAHHVLNNLVVPNVVEF V LPWR+L V+FPT PA + S G GA R G R K+ G G+ ++LQHL PTK R A + R+ A G +I +P P P + AA G A A ++ G G D+ + ++G+ +A R GGR RRRSFGEI+R+ +TG+S+ RLRDHLFD TASPAPP
Sbjct: 1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRAFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVLFERVVVWGMDNAHHVLNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSSGS-----GSGAAKKNKKAGRGEGLRKKQAATGGGITSQLQHLNTPTKKRSA----------ESTPKRAASA-----GAPSIQHQTPPLPERGSPSKTTPVAARNGVANAGSDSKHGGGGASALVAELLDADVGTGAALRADGAAAIATPVPFEDDIATSPESGGSGRRGSGGRPSRRRSFGEIIRSVVTGNSEVRLRDHLFDFSTASPAPP 323
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: D8LDS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS5_ECTSI) HSP 1 Score: 268 bits (684), Expect = 6.120e-74 Identity = 170/353 (48.16%), Postives = 203/353 (57.51%), Query Frame = 1
Query: 58 MPNWLASELCMLVSFSLGAWKTFKALKKGGADYNLLKTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVPESNMSTVLFERVVVWGMGNAHHVLNNLVVPNVVEFVVYLPWRLLHVVFPTSPATALSSTQGDGGLGARAHGGSIRRISGSRNKE---GAGLAARLQHLKAPTKTRIAVPDDVAKDSRQGRSLRSLRASRRGQGNGTIDSPSPVRPSPPVP----PEPQTDAALEGQAPAKGLARSGAS---GGKDSSSEGDHLVGSEGSPPVAARGVGG----------------------------GRAGRRRSFGEIVRATLTGDSQTRLRDHLFDLHTASPAPP 1002
MPNWLASELCM+ SFSLGAWKTFK LK GG DYNLLKTWCLL L+RVFEEY EFLVSWIPFYWLGKC GL LL +P N+ TV+FERVVVWGM NAHH+LNNLVVPNVVEF V LPWR+L V+FPT PA + G R K+ G G+ ++LQHL PTK R A + K RA+ G +PS + +PP+P P T A G+A +G+ GG +S+ L+ ++G A+R G GR RRRSFGEI+R+ +TG+S+ RLRDHLFD TASPAPP
Sbjct: 1 MPNWLASELCMVASFSLGAWKTFKVLKHGGTDYNLLKTWCLLGLLRVFEEYFEFLVSWIPFYWLGKCLGLGLLYLPGGNIPTVVFERVVVWGMDNAHHILNNLVVPNVVEFAVSLPWRVLLVLFPTMPAPSXXXXXXXXXXXXXX----XXXGEGLRKKQAATGGGITSQLQHLNTPTKKRAA--ESTPK-----------RAASAG-------APSTQQQTPPLPARGSPSKTTPVAAR-----NGVANAGSDSKHGGGGASALVAELLDADGGTGAASRADGAAAIATPVPFGDDIATSPESGGSERRGXXGRPSRRRSFGEIIRSAVTGNSEVRLRDHLFDFSTASPAPP 324
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: A0A7R9YDB5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDB5_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 5.960e-16 Identity = 49/126 (38.89%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 58 MPNWLASELCMLVSFSLGAWKTFKALKKGGADYNLLKTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVPESNMSTVLFERVVVWGMGNAHHVLN-NLVVPNVVEFVVYLPWRLLHVVFP 432
M N++A+ LV G W++FK LK G D+ +L+ W +L +VR+ E LE+LVSW+PFYW K L L PES + +LF+ +V+ M H VL+ + + + E ++ LP+ LL +V P
Sbjct: 1 MVNYVATLALNLVCLFAGFWRSFKLLKAGTVDFTILEFWAVLGVVRLLENTLEWLVSWVPFYWTTKSLALLTLCFPESRLPGILFDTLVIPFMRFCHEVLSEDHIEEKLFERLMVLPFVLLDLVIP 126
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: A0A8K1FI23_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI23_PYTOL) HSP 1 Score: 67.0 bits (162), Expect = 5.600e-9 Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 1
Query: 58 MPNWLASELCMLVSFSLGAWKTFKALKKG--GADYN----LLKTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVPESNMSTVLFERVVVWGMGNAHHVLNNLVVPNVVEFVV 396
M +L SE + GA+++ KAL + G + + +L+ W L + +FEEY EF VSWIPFY+ KC L LLLVP + +S VL+ + M ++ V+P V VV
Sbjct: 1 MSFYLISEGLTCLGMFNGAYESLKALSRAEKGIEVSTLTQILEFWIALGALTIFEEYAEFFVSWIPFYYFFKCMLLGLLLVPSTKISHVLYHGFIEPTMDKIQEQVHARVLPVVESLVV 119
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: G4YIB0_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YIB0_PHYSP) HSP 1 Score: 65.1 bits (157), Expect = 2.000e-8 Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 1
Query: 58 MPNWLASELCMLVSFSLGAWKTFKALKK--GGADY----NLLKTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVPESNMSTVLFE 315
M +L SE V GA+++ K L + G D ++L+ W +L+ +F++YLEF +SW PFY+L KC L LLL P + +LFE
Sbjct: 1 MTFYLLSEGLTCVGICSGAYESLKVLSRVEKGVDTATLASVLEFWIVLAAAAIFQQYLEFFISWFPFYYLFKCILLGLLLTPSKHFPHLLFE 92
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: A0A225WDV8_9STRA (Receptor expression-enhancing protein 5-like isoform X2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDV8_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 3.580e-8 Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = 1
Query: 58 MPNWLASELCMLVSFSLGAWKTFKALKK--GGADYNLL----KTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVPESNMSTVLFE 315
M +L SE V GA+++ K L + G D ++L + W +L+ +FE+Y+EF +SW PFY+L KC L LLL P + +LFE
Sbjct: 1 MTFYLLSEGLTCVGIFSGAYESLKVLSRVEKGVDTDILAAVLELWIVLAATAIFEQYIEFFISWFPFYYLFKCVLLGLLLTPTTQFPHLLFE 92
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: W2MGF6_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2MGF6_PHYPR) HSP 1 Score: 63.2 bits (152), Expect = 9.680e-8 Identity = 33/92 (35.87%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 58 MPNWLASELCMLVSFSLGAWKTFKALKK--GGADYN----LLKTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVPESNMSTVLFE 315
M +L SE V GA+++ K L + G D + +L+ W +L+ +F++Y+EF +SW PFY+L KC L LLL P + + FE
Sbjct: 1 MTFYLLSEGLTCVGIFSGAYESLKVLSRVEKGVDTDTLAAVLEFWIVLAAAAIFQQYIEFFISWFPFYYLFKCVVLGLLLTPNKQFTHLFFE 92
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: A0A5D6Y973_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y973_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 4.390e-7 Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 109 GAWKTFKALKKG--GADYN----LLKTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVPESNMSTVLFE 315
GA+++ K L + G + + +L+ W +L+ V+E+Y+EF VSWIPFY+L KC L LLLVP + VL++
Sbjct: 23 GAYESLKVLSRADKGVETSTLCGILEFWVVLAATAVYEQYVEFFVSWIPFYFLFKCGFLGLLLVPHTKFVHVLYD 97
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: A0A8J5M210_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M210_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.190e-6 Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 1
Query: 157 NLLKTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVPESNMSTVLFERVVVWGMGNAHHVLNNLVVPNVVEFVV 396
N LK +L+ +F++Y+EF +SW PFY+L KC L LLL P + +LFE + + + H L+ V+P + V+
Sbjct: 62 NFLKHRIVLAAAAIFQQYIEFFISWFPFYYLFKCVLLGLLLTPNKQFTHLLFEGFIRPAVVSIKHKLDTNVLPIIESLVI 141
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Match: UPI001FB4349F (receptor expression-enhancing protein 5-like n=3 Tax=Vespa TaxID=7443 RepID=UPI001FB4349F) HSP 1 Score: 58.2 bits (139), Expect = 6.970e-6 Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = 1
Query: 82 LCMLVSFSLGAWKTFKALK--KGGADYNLLKTWCLLSLVRVFEEYLEFLVSWIPFYWLGKCCGLALLLVP-ESNMSTVLFERVV 324
+C ++ F A+ + KAL+ K D L W + +L + E + EF+V W+PFYWL KC L+ P E N S +++ R+V
Sbjct: 61 VCNIIGFVYPAYYSMKALESPKKDDDSKWLTYWIVFALFTIIEFFSEFIVCWLPFYWLLKCIFYIWLMAPMEYNGSLIIYRRIV 144 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1279.2051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1279.2051.1 >prot_F-serratus_M_contig1279.2051.1 ID=prot_F-serratus_M_contig1279.2051.1|Name=mRNA_F-serratus_M_contig1279.2051.1|organism=Fucus serratus male|type=polypeptide|length=551bp MPNWLASELCMLVSFSLGAWKTFKALKKGGADYNLLKTWCLLSLVRVFEEback to top mRNA from alignment at F-serratus_M_contig1279:48078..55403- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1279.2051.1 ID=mRNA_F-serratus_M_contig1279.2051.1|Name=mRNA_F-serratus_M_contig1279.2051.1|organism=Fucus serratus male|type=mRNA|length=7326bp|location=Sequence derived from alignment at F-serratus_M_contig1279:48078..55403- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1279:48078..55403- >mRNA_F-serratus_M_contig1279.2051.1 ID=mRNA_F-serratus_M_contig1279.2051.1|Name=mRNA_F-serratus_M_contig1279.2051.1|organism=Fucus serratus male|type=CDS|length=3306bp|location=Sequence derived from alignment at F-serratus_M_contig1279:48078..55403- (Fucus serratus male)back to top |