mRNA_F-serratus_M_contig91.20516.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: A0A6H5K8E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8E9_9PHAE) HSP 1 Score: 183 bits (465), Expect = 2.700e-50 Identity = 97/171 (56.73%), Postives = 126/171 (73.68%), Query Frame = 2
Query: 302 AGASIM--GGGFGS-KSGTQGEVLADNAVGTDAAREAKIEETLRKLGLQGVKEVKGQAGGQ----KPMGSENSSVLDVVPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQEGVVYKEND 793
AGA +M GGGF K+ +GE+L D A+G+D AREAKIEETLRK+G+Q + +V+ + K +G + +S+ D++P ETQ+++ER I GF +CLL L+ CG AI EAYFLST GKLPPDLD F+V T++P FTPSL ATF FSS G+LKLGQMGQE VVY+E+D
Sbjct: 114 AGAPMMASGGGFADVKTAKRGEILQDGAIGSDDAREAKIEETLRKMGVQSIGQVRAAKAKEDKENKSVGQQITSIFDLIPPETQLVMERVFIAGFAVCLLFLVACGCAIGVEAYFLSTNGKLPPDLDKFIVGTLEPLFTPSLGATFLFSSCLGVLKLGQMGQESVVYREDD 284
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: A0A835Z5R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R9_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.990e-22 Identity = 56/136 (41.18%), Postives = 87/136 (63.97%), Query Frame = 2
Query: 401 AKIEETLRKLGLQGVKEVKGQAGGQKPMGSENS-------SVLDVVPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQEGVVYKE 787
++ +E L ++G+QGV+ + + G P G + + ++ DV+P E Q IE+FLI G CL + GIA+ EAY ++T+ LP ++D F+V T++P+FTPSL+ T GFSS G+ KLGQ+G+ GV Y+E
Sbjct: 119 SRQDEILAQMGVQGVR--RDKRGAYIPPGQQEAEKKEIMVTMFDVIPVELQGGIEKFLITGIACCLTFFLASGIALGLEAYAVTTKVPLPDNVDQFIVSTLEPAFTPSLLVTLGFSSVLGIFKLGQLGRAGVNYRE 252
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: A0A7S1E063_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E063_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 4.190e-13 Identity = 36/100 (36.00%), Postives = 58/100 (58.00%), Query Frame = 2
Query: 491 ENSSVLDVVPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQEGVVYKEN 790
E+ ++ V+P I+RFL G + L+ I G AI AEA+ +++ LP D+D F+V ++P+FTP L+ GFS + G+ Q+G G Y+E+
Sbjct: 10 EDFDIISVIPAPLLTAIDRFLKAGLAITTLLFIAAGGAITAEAWSKASKSPLPGDIDQFIVNIVEPNFTPCLLVLLGFSVSLGIFAALQLGSSGSQYRED 109
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: A0A7S1YJJ7_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YJJ7_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 4.120e-11 Identity = 44/150 (29.33%), Postives = 74/150 (49.33%), Query Frame = 2
Query: 356 EVLADNAVGTDAAREAKIEETLRKLGLQGVK---EVKGQAGGQKPMGSENSS--VLDVVPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQEGVVYKEN 790
E+L G A E + E+ R+L + K +V + G + E +++ +P + I+RFL G + ++ + G+ I EA+ +T LP D+D F+V T++P+FTP L GFS + G+ Q+G G Y E+
Sbjct: 171 EILLREKFGMKPAAEQEKEKESRRLQKEAKKKELDVSRKLEGWEKKAEEKGDFDLMEALPAPLLVAIDRFLKAGVAVSTVLFVAAGLGITLEAWSTATNSPLPDDIDAFIVNTVEPNFTPGLFVLLGFSVSLGVFAAAQLGSSGSKYTED 320
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: A0A7S3TW81_9SPIT (Hypothetical protein n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3TW81_9SPIT) HSP 1 Score: 72.8 bits (177), Expect = 6.660e-11 Identity = 48/138 (34.78%), Postives = 75/138 (54.35%), Query Frame = 2
Query: 389 AAREAKIEETLRKLGLQGVKEVKGQAGGQKPMGSENS-SVLDVVPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQE--GVVYKEND 793
A R +++ LR+ G+ +P+G + S L +P++ Q L+ERF GG L + I GIA++ EA + LP +D+F+V T++P TPS++ F FS + GLLK Q E GV+Y+E+D
Sbjct: 94 ATRAERVDSVLRERGI--------LPTDSRPVGQDTSLDPLARIPKKGQELLERFFGGGAILFGFIFIASGIAVSVEALCKVLDKPLPQFVDDFLVNTVEPILTPSILILFFFSISLGLLKQLQFSSESAGVLYREDD 223
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: B7G5U9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5U9_PHATC) HSP 1 Score: 72.8 bits (177), Expect = 1.980e-10 Identity = 33/100 (33.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query: 491 ENSSVLDVVPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQEGVVYKEN 790
E+ ++ ++P I ++RFL G L L+ +G G+ I EA+ ++ LP ++DNF+V ++P+FT L+ GFS + G Q+ +G YKE+
Sbjct: 202 EDLDIMAMIPGPILIAVDRFLKVGLALSSLLFVGAGLGITVEAWSKTSGEPLPENIDNFIVNVVEPNFTTGLLVLLGFSISLGAFAAAQLSSQGAQYKED 301
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: A0A7S3QAY9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAY9_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 8.070e-10 Identity = 36/105 (34.29%), Postives = 54/105 (51.43%), Query Frame = 2
Query: 476 KPMGSENSSVLDVVPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQEGVVYKEN 790
K M E + V+P I+ FL G L + + G I AEA+ ++T+ KLP ++DNF+V I+P+FTP L+ FS G+ Q+ +YKE
Sbjct: 143 KQMKDEEFDIFMVIPLPIIKAIDAFLKLGLTLSTVAFVLAGFGITAEAWAIATDNKLPENIDNFIVNVIEPNFTPGLLVLLSFSVCLGIFATAQLASGSSMYKEE 247
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: A0A7S3L3H2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3H2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 8.630e-10 Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 2
Query: 491 ENSSVLDVVPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQEG 772
++ ++ ++P ++ FL GG L I GI I AEA+ ++ LPPD+DNF+V ++P+FTP L+ GFS + G+L +G EG
Sbjct: 182 QDIDIIAMIPAPVLKALDAFLKGGVVLSGTAFIVAGILITAEAWSKASGQALPPDMDNFIVNVVEPNFTPGLLVVLGFSVSLGVLAAASLGSEG 275
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: A0A7S3ZRQ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRQ2_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 4.310e-9 Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 2
Query: 515 VPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQ------EGVVYKEND 793
VP++ Q+ E+ L+GG LCL V + G AI +A+ +++ L P + F+V ++P FTP+LVA F S + G LK Q+ EGV Y E D
Sbjct: 162 VPDDVQVAAEKILLGGGLLCLAVFVFIGGAITVDAFSVASGSPLEPGMKAFIVDVLEPKFTPTLVAGFACSISLGGLKALQLTSDDAQYSEGVQYSEED 260
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Match: A0A7S0Y843_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y843_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.820e-8 Identity = 32/100 (32.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query: 491 ENSSVLDVVPEETQILIERFLIGGFGLCLLVLIGCGIAIAAEAYFLSTEGKLPPDLDNFVVQTIQPSFTPSLVATFGFSSAWGLLKLGQMGQEGVVYKEN 790
E+ +L V+P+ + I++FL G +C ++ + G+AI EA +T LP D+D F++ ++P+FTP L FS GL Q+ Y+E+
Sbjct: 157 EDFDLLQVIPDPILVFIDKFLKVGVVVCTILFVLAGLAITVEAGSKATANPLPADVDAFIMNVVEPNFTPGLGVLLSFSVGLGLFASLQLNSAASTYRED 256 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig91.20516.1 >prot_F-serratus_M_contig91.20516.1 ID=prot_F-serratus_M_contig91.20516.1|Name=mRNA_F-serratus_M_contig91.20516.1|organism=Fucus serratus male|type=polypeptide|length=251bp MNSVAAKGIASKKSKLADAYHVTSARPTPSTLRMAKKSGGAGSKRKKKKGback to top mRNA from alignment at F-serratus_M_contig91:519693..529050- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig91.20516.1 ID=mRNA_F-serratus_M_contig91.20516.1|Name=mRNA_F-serratus_M_contig91.20516.1|organism=Fucus serratus male|type=mRNA|length=9358bp|location=Sequence derived from alignment at F-serratus_M_contig91:519693..529050- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig91:519693..529050- >mRNA_F-serratus_M_contig91.20516.1 ID=mRNA_F-serratus_M_contig91.20516.1|Name=mRNA_F-serratus_M_contig91.20516.1|organism=Fucus serratus male|type=CDS|length=1506bp|location=Sequence derived from alignment at F-serratus_M_contig91:519693..529050- (Fucus serratus male)back to top |