mRNA_F-serratus_M_contig91.20507.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: D8LNT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT6_ECTSI) HSP 1 Score: 312 bits (799), Expect = 7.730e-96 Identity = 203/404 (50.25%), Postives = 250/404 (61.88%), Query Frame = 2
Query: 212 MFITSRLARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVSWVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDIDTGLEEMRIEATRRIQSLGASAAAEIAKALTRQSYSA-------------KDQLFTRMLGMAAAVGASTDVIDD--------STFPEHEAGRGQRPGRRDERGVTKEGTGKEEKEEEIAAANATMLLDFTEVMKGGVFVEARS---GEDAYERWLPREIRMVEGNSFCMFHA-EGMDVEPDSQER-EEERFKILAVAPAK---TDRSLLLLLTDQGSMELSLPGGDDRDTLLAGFELLLASAVN----DESHVSEAFAERASARRSESLERRESKQWGHAVGQEKVGNCVMMESENESDD 1324
M I S LARH+ VLLGY YPALASAK AVQQDPAAFTQWMTYWVVMSVFAL E FVDFFVSWVPFY+EAKIVLIVWL +PRYQGASQIY+R LHPYL++YE +ID+GLEEMR ATRRIQSLGASAA EIAKA+T+Q +A KD + R+LG+AAA GA +D+ S P + R AN +MLLDF EVMK GVFV+ARS G + W ++IR+V G S+CM +G + + D E EE+RF++LA A+ +D SLL+L TD+G +ELS PG DDRD++L GFEL L S V D F E A R + RR +++W G+ G +++ES ++ D
Sbjct: 1 MIIHSGLARHISVLLGYFYPALASAKTAVQQDPAAFTQWMTYWVVMSVFALVEVFVDFFVSWVPFYYEAKIVLIVWLAMPRYQGASQIYRRLLHPYLDKYEDNIDSGLEEMRAGATRRIQSLGASAATEIAKAVTKQGSTAVGVAACRRMDRSFKDLMLARVLGIAAAGGAG--ALDERPVRSAPTSPIPRPTNDAEENSRRXXXXXXXXXXXXXXXXXXXXXXANTSMLLDFMEVMKAGVFVQARSSLAGRNGNMTWCAQKIRLVHGTSWCMTELIDGPESQLDRDEGGEEQRFQVLAAEAAEDAASDASLLVLTTDRGRVELSPPGRDDRDSMLIGFELFLESYVGGDDGDXXXXXXGFKEVALPDRD--IARRRTRRWEGGTGE---GEGMVLESADDDSD 397
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: A0A2R5GG17_9STRA (Receptor expression-enhancing protein 4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GG17_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.760e-29 Identity = 56/122 (45.90%), Postives = 84/122 (68.85%), Query Frame = 2
Query: 212 MFITSRLARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVSWVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDIDTGLEEMRIEATRRIQSL 577
M + LAR VC LGYLYPA S KA DP+ TQW+T+W+V + F+ AE F D +SW+PFY+EAK+ +++WL P+++GA++IY+R + PYL +YE DID L+ ++ + R + +L
Sbjct: 1 MLVGELLARPVCHFLGYLYPAYQSYKAVKANDPSLHTQWLTFWIVNTYFSFAETFGDTLLSWLPFYYEAKVAVLIWLVAPQFKGATKIYERVVDPYLHRYEKDIDANLDHVKRRSARELGNL 122
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: A0A7S2WB49_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WB49_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.200e-28 Identity = 54/117 (46.15%), Postives = 81/117 (69.23%), Query Frame = 2
Query: 230 LARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVSWVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDIDTGLEEMRIEATRRIQSLG 580
L R +C LGY YPA S KA Q D A TQW+T+W+V + F++AE F D +SWVPFY++AK+ +++WL LP + GA+ +Y++ + PYL +YE DID G+E ++ + + I +LG
Sbjct: 5 LTRILCHCLGYFYPAYQSYKAVKQNDAALHTQWLTFWIVNTYFSIAEVFGDTLLSWVPFYYQAKVFILIWLVLPYFNGATTLYEKVIDPYLHRYEKDIDRGVETVKNRSVKVIGNLG 121
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: UPI00023E8597 (receptor expression-enhancing protein 2-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00023E8597) HSP 1 Score: 107 bits (268), Expect = 3.870e-23 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 2
Query: 212 MFITSRLARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVSWVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDID 526
M +TS +R V V++G LYPA S KA +D +T WM YW+V ++F AE F D F+SW+PFY+E KIV+++WL LP QGA +Y+R +H L E ID
Sbjct: 1 MVLTSLFSRLVIVIVGVLYPAYCSFKAVKYKDHREYTTWMMYWIVFAIFLTAETFSDVFLSWLPFYYEIKIVIVIWLALPYTQGAKTLYRRLIHHKLVDSENQID 105
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: A0A1Y1L4M4_PHOPY (Receptor expression-enhancing protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1L4M4_PHOPY) HSP 1 Score: 105 bits (262), Expect = 6.420e-23 Identity = 48/121 (39.67%), Postives = 81/121 (66.94%), Query Frame = 2
Query: 218 ITSRLARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVSWVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDIDTGLEEMRIEATRRIQSLG 580
I+S ++R V ++ G LYPA AS KA ++ + +WM YW+V ++F AE F D F+SW PFY+E KI+L++WL P +G+S +Y++F+HP L + E +ID + + + ++ +++ LG
Sbjct: 4 ISSIISRLVILICGTLYPAYASYKAVRTKNVKEYVKWMMYWIVFALFTCAETFTDVFLSWFPFYYEIKIILVIWLLSPATKGSSILYRKFVHPMLSKREHEIDEYIAKAKEQSYKQMLDLG 124
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: A0A139WN35_TRICA (Receptor expression-enhancing protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WN35_TRICA) HSP 1 Score: 107 bits (266), Expect = 1.200e-22 Identity = 55/153 (35.95%), Postives = 92/153 (60.13%), Query Frame = 2
Query: 218 ITSRLARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVSWVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDIDTGLEEMRIEATRRIQSLGASAAAEIAK----------ALTRQSYSAKDQL 646
I+S ++R V +L G LYPA AS KA ++ + +WM YW+V ++F AE F D F SW+PFY+E KI+L++WL P +G+S +Y++F+HP L E +ID + + + ++ ++ LG+ + + +L++ S S KDQ+
Sbjct: 2 ISSIISRLVILLFGTLYPAYASYKAVKTKNVKEYVKWMMYWIVFALFTCAETFTDVFFSWLPFYYEIKIILVIWLLSPATKGSSILYRKFVHPALSSREQEIDEYISKAKEQSYKQFLDLGSKGVTALMQTALKNLNPVLSLSQTSISQKDQV 154
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: A0A397UGA2_9GLOM (Protein YOP1 n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397UGA2_9GLOM) HSP 1 Score: 104 bits (260), Expect = 1.460e-22 Identity = 46/100 (46.00%), Postives = 68/100 (68.00%), Query Frame = 2
Query: 236 RHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVSWVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDIDTGL 535
R VC ++GYLYPA AS KA + W+TYW+VM++F++ EG D F+ W+PFY+E K++ ++WL LP+ QGA +IY ++ P L +YE +ID L
Sbjct: 8 RTVCNVVGYLYPAYASFKAIKANNTKNIMAWLTYWIVMALFSVGEGTADNFIFWLPFYYEIKMIFVIWLILPQTQGAKRIYDSYVVPTLTRYEKEIDKKL 107
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: A0A0N4V1Y5_ENTVE (Receptor expression-enhancing protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4V1Y5_ENTVE) HSP 1 Score: 105 bits (263), Expect = 2.660e-22 Identity = 51/118 (43.22%), Postives = 78/118 (66.10%), Query Frame = 2
Query: 230 LARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVS-WVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDIDTGLEEMRIEATRRIQSLG 580
L+R + + G LYPA S KA +D + +WM YW+V ++F + E F D F+S W+PFY+E KIV ++WL P +GAS +Y++++HP L ++E DIDT LE+ + E+ R+ LG
Sbjct: 6 LSRLIILTAGTLYPAYRSYKAVRSRDVREYVKWMMYWIVFALFCVIETFADIFISFWLPFYYEFKIVFVLWLLSPWTKGASILYRKWVHPTLSRHEKDIDTMLEQAKSESYNRVLRLG 123
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: UPI000C25368B (receptor expression-enhancing protein 1 isoform X2 n=3 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C25368B) HSP 1 Score: 108 bits (271), Expect = 2.830e-22 Identity = 50/121 (41.32%), Postives = 79/121 (65.29%), Query Frame = 2
Query: 218 ITSRLARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVSWVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDIDTGLEEMRIEATRRIQSLG 580
I+S ++R V +L G LYPA AS KA +D + +WM YW+V ++F E F D F+SW PFYFE KI+L++WL P +G+S +Y++F+HP L E +ID + + + ++ +++ LG
Sbjct: 2 ISSIISRLVILLFGTLYPAYASYKAVKSKDVKQYVKWMMYWIVFALFTCIETFTDVFLSWFPFYFEIKIILVIWLLSPATKGSSILYRKFVHPTLSSREQEIDEYISKAKEQSYKQVLDLG 122
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Match: A0A8J9ZSM0_BRALA (REEP2 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZSM0_BRALA) HSP 1 Score: 107 bits (268), Expect = 3.360e-22 Identity = 55/165 (33.33%), Postives = 93/165 (56.36%), Query Frame = 2
Query: 218 ITSRLARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFALAEGFVDFFVSWVPFYFEAKIVLIVWLTLPRYQGASQIYQRFLHPYLEQYEGDIDTGLEEMRIEATRRIQSLGASAAAEIAKALTRQSYSAKDQLFTRMLGMAAAVGASTDVIDDST 712
+++ ++R V +L G LYPA AS KA ++ + +WM YW+V ++F E F D F+SWVPFY+E KIV +VWL P +G+S IY++F+HP + + E +ID + + + + +G S A A+ + + + + R++ + ST D S+
Sbjct: 2 VSAIISRFVVLLFGTLYPAYASYKAVKTKNVREYVKWMMYWIVFAIFTFVETFADVFISWVPFYYEVKIVFVVWLLSPYTKGSSFIYRKFVHPAMSKREKEIDEYIAQASERSYETMVKMGKSGLNMAATAVAKTAIKGQQTITERLIRGLSTQDLSTAGRDSSS 166 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig91.20507.1 >prot_F-serratus_M_contig91.20507.1 ID=prot_F-serratus_M_contig91.20507.1|Name=mRNA_F-serratus_M_contig91.20507.1|organism=Fucus serratus male|type=polypeptide|length=390bp MFITSRLARHVCVLLGYLYPALASAKAAVQQDPAAFTQWMTYWVVMSVFAback to top mRNA from alignment at F-serratus_M_contig91:202520..211647+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig91.20507.1 ID=mRNA_F-serratus_M_contig91.20507.1|Name=mRNA_F-serratus_M_contig91.20507.1|organism=Fucus serratus male|type=mRNA|length=9128bp|location=Sequence derived from alignment at F-serratus_M_contig91:202520..211647+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig91:202520..211647+ >mRNA_F-serratus_M_contig91.20507.1 ID=mRNA_F-serratus_M_contig91.20507.1|Name=mRNA_F-serratus_M_contig91.20507.1|organism=Fucus serratus male|type=CDS|length=2340bp|location=Sequence derived from alignment at F-serratus_M_contig91:202520..211647+ (Fucus serratus male)back to top |