mRNA_F-serratus_M_contig904.20463.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: D7FWK8_ECTSI (NAD_binding_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK8_ECTSI) HSP 1 Score: 355 bits (910), Expect = 2.600e-119 Identity = 184/323 (56.97%), Postives = 232/323 (71.83%), Query Frame = 1
Query: 1 MKFLAGLSLCFFAVAVHAFVSNAPLHAYDFPRRLFNSLDTRAPVSSLANRGPKSRNRSSYHGRATVKCMG---DTVWSKVRKETDGLAAATDQHSLTIKAGDIPKGYQVPGQFVQIRVGAEGKPGFFAIASAPPKPNQGGEDLLEFLIKDNESTKPLISSKPGDEVEMSPVMGKGFPVTENFSGYKYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAKNVEVIPVLSEPSDSWTGRTGFIQEAIKKDGIRVPRNSGILVCGHQEMVVDAKAIASSAGVLEGRVLTNF 960
MK LSLCF A AFV + P+ P F+S + A ++ + P++ R++ GR V MG D V+SK + G A Q++LTI AGDI K Y PGQ+VQI+V + KPGFFAIAS PP + G LEFLIK+N++TK L+ K G VE+S VMGKGFP+ ENF+GYKYDFPVQNVVL A+GTGIAP RAAIESG LELPD +DDGVFGRSC+LYWGC+DEESMPW D+++ W+ + VEV+ VLS+PS+SWTGRTGF+Q+AIK++GI +PRNS +LVCGH+EM + K IA AGVL+GRVL+NF
Sbjct: 1 MKSSLALSLCFLAGGAQAFVGHVPVSQPRSPWGGFSSSSSVATRAAASVPAPRAERRTA--GRVVVTKMGWGDDVVFSKAKVVETGKIAE-GQYALTIDAGDIAKEYTAPGQYVQIKVTSSAKPGFFAIAS-PPDASSGS---LEFLIKENDATKALVGVKAGGSVEVSTVMGKGFPIKENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELPDADDDGVFGRSCKLYWGCRDEESMPWKDRVEAWDKRGVEVVVVLSQPSESWTGRTGFVQQAIKEEGIPLPRNSAVLVCGHKEMAEEVKEIAEKAGVLDGRVLSNF 316
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: A0A835YXH2_9STRA (NAD_binding_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH2_9STRA) HSP 1 Score: 260 bits (665), Expect = 2.120e-82 Identity = 139/283 (49.12%), Postives = 188/283 (66.43%), Query Frame = 1
Query: 124 APVSSLANRGPKSRNRSSYHGRATVKCMG---DTVWSKVRKETDGLAAATDQHSLTIKAGDIPKGYQVPGQFVQIRVGAEGKPGFFAIASAPPKPNQGGEDLLEFLIKDNESTKPLISSKPGDEVEMSPVMGKGFPVTENFSGYKYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAKNVEVIPVLSEPS-DSWTGRTGFIQEAIKKDGIRVPRNSGILVCGHQEMVVDAKAIASSAGVLEGRVLTNF 960
A + L + +R R++ R TV+C + W K AA +SLT+ AG+I GY++PGQ+VQI+ G E K GF+AIASAP + + EFL+K+ ++ K L K G ++MS VMG GFP+ E F+GYKYDFPVQNV+L+ATGTGIAP+RAAIESG+LE+ + G FGRSC LY+G E M + DKL+EWE+K + V+PV+S P+ +W GRTGF+Q+A+ +DG+RVPRN+G L+CG +EMV + K I AGV GR L NF
Sbjct: 34 AAAARLRDAAVSARPRAT--SRQTVQCNAWATEVEW-KTASLVSNKKAADGLYSLTVDAGEISTGYKMPGQYVQIKTGDE-KAGFYAIASAPKT-----DGMFEFLVKETDTNKWLTQMKSGT-LDMSAVMGNGFPIKEEFTGYKYDFPVQNVILVATGTGIAPIRAAIESGLLEV---DTSGPFGRSCTLYYGAHSPERMAYQDKLEEWESKGMTVVPVMSAPAAGAWNGRTGFVQKALGEDGVRVPRNTGALLCGQKEMVAEVKDILGGAGVFAGRQLLNF 303
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: A0A7S2UVS4_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVS4_9STRA) HSP 1 Score: 229 bits (583), Expect = 4.560e-70 Identity = 116/251 (46.22%), Postives = 159/251 (63.35%), Query Frame = 1
Query: 211 DTVWSKVRKETDGLAAATDQHSLTIKAGDIPKGYQVPGQFVQIRVGAEGKPGFFAIASAPPKPNQGGEDLLEFLIKDNESTKPLISSKPGDEVEMSPVMGKGFPVTENFSGYKYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAKNVEVIPVLSEPSDS-WTGRTGFIQEAIKKDGIRVPRNSGILVCGHQEMVVDAKAIASSAGVLEGRVLTNF 960
D W++V K + AA S+ + GDI K Y PGQ+VQ+R A GKPGF+AIA+AP K G EFLIK+ E L ++ G +EM+ MGKG+ + ENF GYKYD+P N++L A G+GIAP+RAAIE+G+ + + CRLY+G K + + + DK + W A VE++PV+S P + WTGRTG+IQ+A+K DG+ +PRNSG ++CGH+EMV K + AG EGR L NF
Sbjct: 58 DIAWNQV-KVLENKKAAEGLKSIVLDVGDIEKSYTNPGQYVQLRPDASGKPGFYAIANAPAKAVSKG--AFEFLIKETEGNTWLTGAEDGAALEMTGAMGKGYAIQENFLGYKYDWPCINILLFACGSGIAPVRAAIENGLTVMKGSP----LMKQCRLYYGVKTPDHLAYKDKFEAWAADGVEIVPVVSRPEGTGWTGRTGYIQDALKADGVDIPRNSGAIMCGHKEMVESVKETMAEAGSFEGRFLLNF 301
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: A0A6H5JM17_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM17_9PHAE) HSP 1 Score: 227 bits (578), Expect = 7.590e-67 Identity = 109/174 (62.64%), Postives = 134/174 (77.01%), Query Frame = 1
Query: 271 HSLTIKAGDIPKGYQVPGQFVQIRVGAEGKPGFFAIASAPPKPNQGGEDLLEFLIKDNESTKPLISSKPGDEVEMSPVMGKGFPVTENFSGYKYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAKNVEVIPVLSEPSD 792
++LTI GDI K Y VPGQ+VQI+V + KP FFAIAS P ++N++T+ L+ K G VE+SPVMGKGFP+TENF+GYKYDFPVQNVVL A+GTGIAP RAAIESG LELPD +DDGVFGRSC+LYWGC+DEES+PW D++K W+ + VEV+ VLSEPS+
Sbjct: 347 YALTIDVGDIAKEYTVPGQYVQIKVTSSDKPRFFAIASPPD-------------ARENDATEALVGVKAGGSVEVSPVMGKGFPITENFTGYKYDFPVQNVVLSASGTGIAPFRAAIESGALELPDADDDGVFGRSCKLYWGCRDEESIPWKDRVKAWDKQGVEVVIVLSEPSE 507
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: A0A7S1BYK0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYK0_9STRA) HSP 1 Score: 211 bits (537), Expect = 3.710e-63 Identity = 106/221 (47.96%), Postives = 147/221 (66.52%), Query Frame = 1
Query: 310 YQVPGQFVQIRVGA--EGKPGFFAIASAPPKPNQGGEDLLEFLIKDNESTKPLISS-KPGDEVEMSPVMGKGFPVTENFSGYKYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAK-NVEVIPVLSEPSDSWTGRTGFIQEAIKKDGIRVPRNSGILVCGHQEMVVDAKAIASSAGVLEGRVLTNF 960
+QVPGQ+VQ+R E KP FFA+A++P +GG EFLIK NE S K GD++++S V+G GFP+ ++F G KYDFP QN++L A GTGIAP+R+AIESG L+L GR RLY+GC+ + M + ++ WE + V+V+PV+S S W GRTG++Q A+++DG+ V RN+G+L+CG + M K I + AGV EGRVLTNF
Sbjct: 90 FQVPGQYVQVRAAGDEECKPSFFALANSPAAAQEGG--CFEFLIKKNEGNAYCTSDVKEGDKIDVSQVLGNGFPIADHFDGLKYDFPTQNILLFAAGTGIAPIRSAIESGSLKLDT-------GRQARLYYGCRSPQEMAYAERFSIWEKEYGVQVVPVVSGDSAEWPGRTGYVQNALEEDGVAVARNTGVLLCGMKGMAEGVKDIVTKAGVFEGRVLTNF 301
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: B7G998_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G998_PHATC) HSP 1 Score: 209 bits (532), Expect = 4.320e-63 Identity = 112/254 (44.09%), Postives = 156/254 (61.42%), Query Frame = 1
Query: 211 DTVWSKVRKETDGLAAATDQHSLTIKAGDIPKG---YQVPGQFVQIRVGAEGKPGFFAIASAPPKPNQGGEDLLEFLIKDNESTKPLISSKPGDEVEMSPVMGKGFPVTENFSGYKYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAKNVEVIPVLSEPSDS-WTGRTGFIQEAIKKDGIRVPRNSGILVCGHQEMVVDAKAIASSAGVLEGRVLTNF 960
D +WS + T+ A + +S+T+ P+ Y++PGQ+VQ+R+ KP F AIASAP N EFL+K E L S PG VE+S V+G G+ + EN KYDFP QN++L A G+G+AP++AA+ESG L++ + R RLY+G + E + +VDK EWEA EV+PVLS+P +S W GRTG+IQ A+++DG+ +PRNSG L+CG + M K + AGV EGRVL NF
Sbjct: 6 DPIWSPSKVTTNSKACESG-NSVTLNVSVQPETASEYKLPGQYVQVRLDDSTKPLFLAIASAPDAENAS----FEFLVKKTEGNDWLTSIAPGTAVEVSQVLGNGYSIAENIDSLKYDFPTQNILLFAAGSGLAPIKAALESGQLKVGSDSS-----RQARLYYGERTAEDLCYVDKYSEWEAAGFEVVPVLSQPDESVWKGRTGYIQTALEEDGVDIPRNSGALLCGMKGMTEAVKDFLTKAGVFEGRVLFNF 249
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: A0A1E7FVH1_9STRA (Ferredoxin reductase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVH1_9STRA) HSP 1 Score: 208 bits (529), Expect = 8.670e-63 Identity = 113/251 (45.02%), Postives = 154/251 (61.35%), Query Frame = 1
Query: 217 VW--SKVRKETDGLAAATDQHSLTIKAGDIPKGYQVPGQFVQIRVGAEGKPGFFAIASAPPKPNQGGEDLLEFLIKDNESTKPLISSKPGDEVEMSPVMGKGFPVTENFSGY-KYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAKNVEVIPVLSEPSDSWTGRTGFIQEAIKKDGIRVPRNSGILVCGHQEMVVDAKAIASSAGVLEGRVLTNF 960
+W S+++ AAT + + + Y+ PGQ+VQ++ EGKP F AIASAP N +FLIK + L + VE+S V+G GFPV + KYDFP QN++L A G+GIAP+RAAIESG L+ GR+ RLY+G + E+ M +VDK EWE+ +EV+PVLS+PSD+W GRTG++Q A+++DG+ VPRNSG L+CG + M I + AGV EGRVLTNF
Sbjct: 1 IWTTSEIKTNDSANKAATSIAVTVDVSPETAQEYKFPGQYVQVKQNEEGKPLFLAIASAPDAENA----KFDFLIKKTDDNAWLTTGG----VEVSQVLGGGFPVKDELDNVVKYDFPCQNILLFAAGSGIAPIRAAIESGELKTSKSG-----GRTARLYYGARTEDDMCFVDKFSEWESMGIEVVPVLSQPSDTWKGRTGYVQNALEEDGVPVPRNSGALLCGQKGMAESVTEILTKAGVFEGRVLTNF 238
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: A0A7S3QJ99_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ99_9STRA) HSP 1 Score: 207 bits (526), Expect = 5.360e-61 Identity = 106/258 (41.09%), Postives = 158/258 (61.24%), Query Frame = 1
Query: 211 DTVWSKVRKETDGLAAATDQH-SLTIK-AGDIPKGYQVPGQFVQIRVGA---EGKPGFFAIASAPPKPNQGGEDLLEFLIKDNESTKPLISSKPGDEVEMSPVMGKGFPVTENFSGYKYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAKNVEVIPVLSEPSD---SWTGRTGFIQEAIKKDGIRVPRNSGILVCGHQEMVVDAKAIASSAGVLEGRVLTNF 960
D +W + A+A+ L + + D+ + Y+VPGQ+VQ++ EGK F AIASAP + +EFL+K +S + + G + +S V+G GFP+ E SG+K+DFP+QN +L A G+GIAP+RAAIESG L + G GR+ RLY+GC MP++ K +EWE +EV+PV+S P + WTGRTG++Q +++DG+ +PRN+G L+CG + M K + ++AGV E RV+TNF
Sbjct: 88 DPIWESATITSTSAASASGNFVGLKVDVSADLVEAYKVPGQYVQVKQDINDEEGKVLFLAIASAPGAGAETEGSSIEFLVKKTDSNDWITNVDDGTAIAVSQVLGGGFPIEEEMSGFKHDFPLQNCLLFANGSGIAPIRAAIESGQLNIGKP---GEGGRTARLYFGCTTPADMPYLTKFREWETNGIEVVPVISRPEECEGEWTGRTGYVQNLVEEDGVAIPRNTGALLCGVKGMAESIKDLLTTAGVFESRVMTNF 342
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: A0A6U3NQ63_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NQ63_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.240e-60 Identity = 127/322 (39.44%), Postives = 177/322 (54.97%), Query Frame = 1
Query: 37 AVAVHAFVSNAPLHAYDFPRRLFNSLDTRAPVSSLANRGPKSRNRSSYHGRATVKCMG---DTVWSKVRKETDGLAAATDQH-SLTIKA-GDIPKGYQVPGQFVQIRVGAE--GKPGFFAIASAPPKPNQGG----EDLLEFLIKDNESTKPLISSKPGDEVEMSPVMGKGFPVTENFSGYKYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAKNVEVIPVLSEPSDS---WTGRTGFIQEAIKKDGIRVPRNSGILVCGHQEMVVDAKAIASSAGVLEGRVLTNF 960
A AV + S+ +D PR F VSS+ + RSS TV MG D +WSK ++ A + +++K D+ Y+V GQ+VQ+R + KP F AIAS P EFLIK E+ + + P V++S V+G GFP EN G+KYDFP QNV+ ATG+GIAP+RAAIESG + + G GR+ RLY+G E MP+ DK +WE E++PV+S P ++ W GRTG++Q A+++DG+ VPRNS L+CG + M K + S+AGV EGR++TNF
Sbjct: 23 AFAVGSTTSSPLARHHDVPRPAF--------VSSVQQK------RSS----GTVIYMGWGPDPIWSKCAVTSNAPACPSSSCVCISVKMPADVAAEYKVAGQYVQVRPEGDDDAKPIFLAIASPPTASADEAAGPSSTTFEFLIKKTENNDWITNIPPSTCVDVSQVLGNGFPTAENMEGFKYDFPTQNVLFFATGSGIAPIRAAIESGQMGV---NPPGQGGRTARLYYGVSTPEDMPYADKFAQWELAGFEIVPVVSRPEETGAEWFGRTGYVQNALEEDGVAVPRNSAALLCGVKGMTESVKDLLSNAGVFEGRIMTNF 323
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Match: A0A7S2G1T3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1T3_9STRA) HSP 1 Score: 201 bits (511), Expect = 5.830e-60 Identity = 118/260 (45.38%), Postives = 159/260 (61.15%), Query Frame = 1
Query: 208 GDTVWSKVRKETDGLAAATDQHSLTIKAGD-IPKGYQVPGQFVQIRVGAEGKPGFFAIASAP-PKPNQGGEDLLEFLIKDNEST------KPLISSKPGDEVEMSPVMGKGFPVTENFSGY-KYDFPVQNVVLIATGTGIAPLRAAIESGILELPDEEDDGVFGRSCRLYWGCKDEESMPWVDKLKEWEAKNVEVIPVLSEPSDSWTGRTGFIQEAIKKDGIRVPRNSGILVCGHQEMVVDAKAIASSAGVLEGRVLTNF 960
GD V K AA S+T++AGD I Y +PGQFVQI+ + K GFFAIAS+P P Q E LIK +E + + L SK G+ + MSP MG GF + +NFS DFPVQNV+L A G+GI+P+R+AIESG L G+ C LY+G +D M +++K EWEAK V+V+PV+S+ +D W GRTG++Q A+K+DG+++ RN+G L+CG + M + K AGV EGRVLTNF
Sbjct: 4 GDDVVFSTAKVLSNEPAAEGMRSITVEAGDDILGAYTIPGQFVQIKEKEDTKAGFFAIASSPGATPGQ-----CELLIKLSEGSDWAPGNQWLCGSKAGETLIMSPAMGSGFKMEDNFSETGANDFPVQNVLLFAAGSGISPIRSAIESGALA----------GKDCTLYYGARDTTFMAYMEKFDEWEAKGVKVVPVMSK-ADGWDGRTGYVQAALKEDGVKLARNTGALMCGMKGMAEEVKEALVEAGVDEGRVLTNF 247 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig904.20463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig904.20463.1 >prot_F-serratus_M_contig904.20463.1 ID=prot_F-serratus_M_contig904.20463.1|Name=mRNA_F-serratus_M_contig904.20463.1|organism=Fucus serratus male|type=polypeptide|length=321bp MKFLAGLSLCFFAVAVHAFVSNAPLHAYDFPRRLFNSLDTRAPVSSLANRback to top mRNA from alignment at F-serratus_M_contig904:118351..131263- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig904.20463.1 ID=mRNA_F-serratus_M_contig904.20463.1|Name=mRNA_F-serratus_M_contig904.20463.1|organism=Fucus serratus male|type=mRNA|length=12913bp|location=Sequence derived from alignment at F-serratus_M_contig904:118351..131263- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig904:118351..131263- >mRNA_F-serratus_M_contig904.20463.1 ID=mRNA_F-serratus_M_contig904.20463.1|Name=mRNA_F-serratus_M_contig904.20463.1|organism=Fucus serratus male|type=CDS|length=1926bp|location=Sequence derived from alignment at F-serratus_M_contig904:118351..131263- (Fucus serratus male)back to top |