mRNA_F-serratus_M_contig903.20455.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig903.20455.1 vs. uniprot
Match: D7FTF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTF4_ECTSI) HSP 1 Score: 430 bits (1106), Expect = 2.370e-141 Identity = 266/540 (49.26%), Postives = 339/540 (62.78%), Query Frame = 2
Query: 134 GKKVGTLVEEQLRYCRSLRQVDLQSITQHPVTDEGYLKRANSIIMLLKADVRAMDACAA-IFLPSSEVDHTDKTTNRSADASEVAVSAYGVERTEQLLRRFRQVDTADSSNGIV-AMSRTNQLVAIRERLQAGVSARLLRLKDDMDKEFGPVLADMESCLRTEIDTQAKPDTTEHCSTCARLFVDLCHKFQARGEICNFPSQSEVMVHTCRGLRSAKEGLNLAILVKTLRKERDGIAERLTGAEAELKRIHHSYTEAMTPEVEASLENRLRQNIEEQHVDNARLKADIASFKKDQERLVAENGRLTDALAELQAQLEINKENHRRELAWLAPKIDTAENRAAEIEGLMDQMNLRLSLLGSSHKKACEEVRDLKAQLAEVREEGTGGERARREAQRAQDTIRRLQAEVRWKNRLVTVAMSAKTTAQDEYREMKRDAEESERRMRETQGTCTLLKVQKDSLTRKLMKEEASLATAEDREAGLREEVRKMAEEIGRKALENELLQERLDNQELELRNFSNLQKEHQELEATYRASVYQQHTVS 1747
GKKV LV+EQL+YCRSLR+ D+ S Q+ TDE LK+ANS+IMLLKADVR ++ACAA + LPS TD T SEV SAY VE E+ + A+S TNQL+ IRERLQAG+S+RLL LK MDKEFG DMES LR E DTQAK D EHCS CAR FV+LC+KFQ VMVH CRGLR+AKEGLN +L+K LR+ERD +A+RL EA+LKRIHHSYTE M P++ LENR R IEEQ D +RL+A+I S K+D ERL+AENGR +DA+ ELQ+Q + NKE H RELAWL PK+ AE+RA EIEGL+DQMNL+LSLL +SH+KA EEV DLK QL+ + +G G + + +++ +A E +R+ +G L + Q+D + R+L + SLA+AE RE E++R+ E++ KA EN ++QERLDNQE+ELR++SNLQKE L + VY+ TV+
Sbjct: 10 GKKVSALVQEQLQYCRSLRRADMLSAVQNVATDEECLKQANSLIMLLKADVRVLNACAARLLLPSEAAIVTDSAT------SEVPRSAYNVETIERXXXXXXXXXXXXXXXXXIQAVSATNQLLLIRERLQAGLSSRLLELKTKMDKEFGTAFVDMESYLRMEKDTQAKSDA-EHCSACARYFVELCYKFQ-------------VMVHACRGLRAAKEGLNQTVLLKALREERDSLAKRLGDCEADLKRIHHSYTEMMNPDMAVGLENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSQAQSNKEQHARELAWLTPKVAAAESRAVEIEGLVDQMNLKLSLLSASHRKASEEVADLKIQLSLAKADGPGAKLS----------------------------------------DLQGEAAECRNVIRKLKGARILCEKQRDDVARRLEGVQGSLASAEQRELETAEQLRQTQEDLALKAEENGIMQERLDNQEMELRDYSNLQKEFNTLSLKNKDLVYRVATVN 489
BLAST of mRNA_F-serratus_M_contig903.20455.1 vs. uniprot
Match: A0A6H5JEQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ6_9PHAE) HSP 1 Score: 371 bits (952), Expect = 3.780e-118 Identity = 243/547 (44.42%), Postives = 315/547 (57.59%), Query Frame = 2
Query: 212 TQHPVTDEGYLKRANSIIMLLKADVRAMDACAA-IFLPSSEVDHTDKTTNRSADASEVAV-------------SAYGVERTEQLLRRFRQVDTADSS-NGIVAMSRTNQLVAIRERLQAGVSARLLRLKDDMDKEFGPVLADMESCLRTEI--------------------DTQAKPDTTEHCSTCARLFVDLCHKFQARGEICNFPSQSEVMVHTCRGLRSAKEGLNLAILVKTLRKERDGIAERLTGAEAELKRIHHSYTEAMTPEVEASLENRLRQNIEEQHVDNARLKADIASFKKDQERLVAENGRLTDALAELQAQLEINKENHRRELAWLAPKIDTAENRAAEIEGLMDQMNLRLSLLGSSHKKACEEVRDLKAQLAEVREEGTGGERARREAQRAQDTIRRLQAEVRWKNRLVTVAMSAKTTAQDEYREMKRDAEESERRMRETQGTCTLLKVQKDSLTRKLMKEEASLATAEDREAGLREEVRKMAEEIGRKALENELLQERLDNQELELRNFSNLQKEHQELEATYRASVYQQHTVS 1747
T++ TDE LK+ANS+IMLLKADVR ++ACAA + LPS TD TN S SAY VE + + A+S TNQL+ IRERLQAG+S+RLL LK +MDKEFG DMES LR E DTQAK D EHCSTC R FV+LC+KFQ VMVH CRGLR+AKEGLN +L+K LR+ERD +A+RL E ELKRIHHSYTE M P++ LENR R IEEQ D +RL+A+I S K+D ERL+AENGR +DA+ ELQ+ + NKE H RELAWL PK+ AE+RA EIEGL+DQMNL+LSLL +SH+KA EEV DLK QL+ + +G G + + +++ +A E +R+ +G L + Q+D + R+L + SL +AE RE E++R+ E++ KA EN ++QERLDNQE+ELR++SNL+KE L + +Y+ TV+
Sbjct: 6 TKNVATDEECLKQANSLIMLLKADVRVLNACAARLLLPSDAAIVTDSATNEIPRRSHSGDGHLKDTTTFPHENSAYSVETIXXXXXXXXXXXXXXXXXSSLQAVSATNQLLLIRERLQAGLSSRLLELKTEMDKEFGTAFVDMESYLRMEKAKKTVPNERPFVTYSSRPMQDTQAKSDA-EHCSTCTRYFVELCYKFQ-------------VMVHACRGLRAAKEGLNQTVLLKVLREERDSLAKRLGDCETELKRIHHSYTEMMNPDMAVGLENRQRHKIEEQDADLSRLRAEIVSLKRDHERLLAENGRSSDAVGELQSHAQSNKEQHARELAWLTPKVAAAESRAVEIEGLVDQMNLKLSLLSASHRKASEEVADLKIQLSLAKADGPGAKLS----------------------------------------DLQGEAAECRNVIRKLKGARILCEKQRDDVARRLEVAQGSLTSAEQRELETAEQLRQTQEDLASKAEENGIMQERLDNQEMELRDYSNLRKEFNTLSLKNKDLMYRVATVN 498
BLAST of mRNA_F-serratus_M_contig903.20455.1 vs. uniprot
Match: A0A836CM21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM21_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.820e-36 Identity = 113/363 (31.13%), Postives = 179/363 (49.31%), Query Frame = 2
Query: 248 RANSIIMLLKADVRAMDAC---------AAIFLPSS---EVDHTDKTTNRSA-DASEVAVSAYGVERTEQLLRRFRQVDTADSSNG-----IVAMSRTNQLVAIRERLQAGVSARLLRLKDDMDKEFGPVLADMESCLRTEIDTQAKPDTTEHCSTCARLFVDLCHKFQAR-GEICNFP----------SQSEVMVHTCRGLRSAKEGLNLAILVKTLRKERDGIAERLTGAEAELKRIHHSYTEAMTPEVEASLENRLRQNIEEQHVDNARLKADIASFKKDQERLVAENGRLTDALAELQAQLEINKENHRRELAWLAPKIDTAENRAAEIEGLMDQMNLRLSLLGSSHKKACEEVRDLKA 1249
+AN +I+ LK+DVR + AA+ +P V H D A + S+ A + GV E+LL + V TA + + A+ +L +R L A + RL K +D++FG DM++ LR E D A C FV + H+ R I P ++ +++ H GLR+ +EGL+ A+L+K R ER +AE+L GA+AEL+RIHH+Y E +TPE L NR R IEE ++ + S K ++ A+ GR++D LA+ Q +E H RELA L ++++ RA ++E L Q +++L S++++ E+ L+A
Sbjct: 44 KANKLILQLKSDVRTLSKYVSRLPATDKAAVLVPDHMRLRV-HADVAAQAQAMEMSKAAEAVVGVVALEKLLEQVPLVPTAAAEDAREAALAAALDTVARLDELRGGLMAALERRLAAAKQQLDRDFGASFLDMQAFLRAEQDVLAAASDARTCGQGTIAFVQVTHQLTRRLAMIAKAPLYAPADPLPHNEFQLLAHAAHGLRAVREGLSHAVLLKQARAERQALAEQLAGAQAELRRIHHTYAEMLTPETSKGLANRQRIAIEELTAQAKAIRDENGSLKLQLDKSTAQQGRVSDLLADAQMAVEAQGARHGRELARLKTQVESMRARAEQLESLAAQSQTHIAMLHSANRRQAAELERLRA 405 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig903.20455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig903.20455.1 >prot_F-serratus_M_contig903.20455.1 ID=prot_F-serratus_M_contig903.20455.1|Name=mRNA_F-serratus_M_contig903.20455.1|organism=Fucus serratus male|type=polypeptide|length=567bp MSDHLVGKKVGTLVEEQLRYCRSLRQVDLQSITQHPVTDEGYLKRANSIIback to top mRNA from alignment at F-serratus_M_contig903:240754..267595- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig903.20455.1 ID=mRNA_F-serratus_M_contig903.20455.1|Name=mRNA_F-serratus_M_contig903.20455.1|organism=Fucus serratus male|type=mRNA|length=26842bp|location=Sequence derived from alignment at F-serratus_M_contig903:240754..267595- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig903:240754..267595- >mRNA_F-serratus_M_contig903.20455.1 ID=mRNA_F-serratus_M_contig903.20455.1|Name=mRNA_F-serratus_M_contig903.20455.1|organism=Fucus serratus male|type=CDS|length=3402bp|location=Sequence derived from alignment at F-serratus_M_contig903:240754..267595- (Fucus serratus male)back to top |