mRNA_F-serratus_M_contig903.20454.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig903.20454.1
Unique NamemRNA_F-serratus_M_contig903.20454.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: D7FTF5_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTF5_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 7.470e-59
Identity = 95/117 (81.20%), Postives = 111/117 (94.87%), Query Frame = 1 
Query:    1 MAFRASQALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKIKMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELIEKYSEWRLWEAVEELDR 351
            MAFRA+QA+RMVVKKTSTGLVGLAVDV+ARANFIA+QKQIL KIK+IPDHAQYRKDVEAIS YRLKVATE EDEE IED +++GQLEEL++DGK EL+LI+KY+EWRLWEAV+EL++
Sbjct:    1 MAFRATQAVRMVVKKTSTGLVGLAVDVNARANFIALQKQILEKIKVIPDHAQYRKDVEAISGYRLKVATETEDEETIEDEINHGQLEELLVDGKNELKLIDKYAEWRLWEAVDELNK 117
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: A0A7S2SRG1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRG1_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.080e-29
Identity = 64/120 (53.33%), Postives = 87/120 (72.50%), Query Frame = 1 
Query:    1 MAFRASQALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKI-KMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELIEKYSEWRLWEAVEELDREK 357
            MA R ++ALR+ V KTSTGLVGL VDV+AR N I++Q Q+L    +++P+   YR  V A S+YRLKVATE+++E++IE I+  GQLEELI   K E+ELIE Y+E R WE V + + E+
Sbjct:    6 MALRLTRALRLAVSKTSTGLVGLPVDVNARVNLISMQSQVLAAAERLLPEGTAYRDSVVATSSYRLKVATEHQEEDEIERIIGFGQLEELIWQAKDEIELIEYYAENRAWERVADAEFER 125
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: A0A7S2BEJ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BEJ1_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.960e-28
Identity = 61/114 (53.51%), Postives = 79/114 (69.30%), Query Frame = 1 
Query:    4 AFRASQALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKIKMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELIEKYSEWRLWEAVEEL 345
            A R ++ +   V KTSTGLVGL VD++ RAN IA+Q+Q+L  +K IP+ A YR+ VEA + YRLKVATE  DEE IE  +  GQLEELI  GK E+ELI+ Y+  + WE   +L
Sbjct:    7 ALRLTRPVAQAVHKTSTGLVGLKVDLNGRANLIAMQQQLLEAVKAIPETAAYRQSVEATATYRLKVATEETDEEAIEKTIGFGQLEELIEQGKDEMELIDYYAGEKGWEMAADL 120
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: A0A835Z296_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z296_9STRA)

HSP 1 Score: 106 bits (265), Expect = 4.970e-27
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 1 
Query:   10 RASQALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKIKMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELIEKYSEWRLWEAVEELDR 351
            RA+   R   KKTSTGLVGL VD +AR N    Q  IL KIK+IP+H  YRK VEAIS YRLKV   +  +E++ED ++ GQLEELI+    EL LI+ Y + R+WE  E LD+
Sbjct:   13 RATPVAREAWKKTSTGLVGLPVDPNARVNLAQKQNDILEKIKIIPEHTGYRKAVEAISKYRLKVLDSSLTDEQVEDEINCGQLEELIVQADDELGLIQFYYDERIWERREALDK 126
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: A0A2D4BMW9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMW9_PYTIN)

HSP 1 Score: 101 bits (251), Expect = 3.050e-25
Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = 1 
Query:   13 ASQALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKIKMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELIEKYSEWRLWE 330
            A++ LRM V+KT+TG+VGL V+V+AR + IA+  + L   + +P+   YRK VE I+NYRLKV  ENEDE+ IE +++ GQLEELI   + EL +I  Y E +LWE
Sbjct:    3 ATRVLRMAVRKTTTGIVGLPVNVNARQDLIALYNKTLQAAQTLPEGIAYRKAVEQITNYRLKVVMENEDEDTIEKVINCGQLEELIEQAEDELSVIPMYLEHKLWE 108
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: A0A7S4E5V8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5V8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.610e-25
Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 1 
Query:   22 ALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKIKMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELIEKYSEWRLWEAVEELD 348
            A R    KT+TG+VGL VD HAR   IA+ +Q+L++IK +P+ A+YRK VEA  NYRLK   ENEDE  +E+++  GQLEELI     EL ++  Y    +W+ + ELD
Sbjct:   52 ARRAATTKTTTGIVGLPVDPHARETLIALNEQLLDEIKQVPEGAEYRKSVEATCNYRLKCLRENEDEATLEELIGMGQLEELIESQTEELGVLRMYVAEEMWKVIAELD 160
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: A0A7S2WV54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV54_9STRA)

HSP 1 Score: 100 bits (248), Expect = 7.770e-25
Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 1 
Query:    1 MAFRASQALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKI-KMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELI 300
            MA R ++ALR+ V KTSTGLVGL VDV+AR N I++Q Q+L    +++P+   YR  V A S+YRLKVATE+++E++IE I+  GQLEELI   K E+ELI
Sbjct:    6 MALRLTRALRLAVSKTSTGLVGLPVDVNARVNLISMQSQVLAAAERLLPEGTAYRDSVVATSSYRLKVATEHQEEDEIERIIGFGQLEELIWQAKDEIELI 106
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: A0A6G0XIW0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XIW0_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.770e-24
Identity = 57/109 (52.29%), Postives = 75/109 (68.81%), Query Frame = 1 
Query:    7 FRASQALRM-VVKKTSTGLVGLAVDVHARANFIAVQKQILNKIKMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELIEKYSEWRLWE 330
            FRA++AL M VVKKTSTGLVGL V+ + R + I +  + L   +       YR  VE I+N+RLKV T+NEDE K+E +++ GQ+EELI   + EL LI KY+EWRLWE
Sbjct:    2 FRATRALSMAVVKKTSTGLVGLPVNPNWRNDLIKIYGETLKATQTHLPDCHYRTSVEQITNFRLKVVTDNEDENKVEALINCGQVEELIEQAEDELFLIPKYAEWRLWE 110
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: A0A8K1FMG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMG6_PYTOL)

HSP 1 Score: 98.6 bits (244), Expect = 3.510e-24
Identity = 53/106 (50.00%), Postives = 76/106 (71.70%), Query Frame = 1 
Query:   13 ASQALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKIKMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELIEKYSEWRLWE 330
            A++ LRM V+KTSTG+VGL V+ +AR + IA+ ++ L +++++PD   YR  VE I+NYRLKV  +NEDE+ IE  ++ GQLEELI   + EL +I  Y E +LWE
Sbjct:    3 ATRVLRMAVRKTSTGIVGLPVNPNARNDLIAIYQKTLKEVQVLPDGIAYRSAVEKITNYRLKVVLDNEDEDVIEKEINCGQLEELIEQAEDELSVIPVYLENKLWE 108
[Close]
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Match: K3WST9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WST9_GLOUD)

HSP 1 Score: 98.2 bits (243), Expect = 4.830e-24
Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 1 
Query:   13 ASQALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKIKMIPDHAQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELIEKYSEWRLWE 330
            A++ LRM  KKT+TG+VGL V+ +AR + I + ++ L +IK++P++  YR  VE I+NYRLKV  ENEDE  IE  ++ GQLEELI   + EL +I  Y E +LWE
Sbjct:    3 ATRVLRMAAKKTTTGIVGLPVNPNARQDLIKIYQKTLQEIKVLPENTVYRDSVERITNYRLKVTLENEDEHVIEKEINMGQLEELIEQAEDELSVIPVYLENKLWE 108
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig903.20454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTF5_ECTSI7.470e-5981.20NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus... [more]
A0A7S2SRG1_9STRA1.080e-2953.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2BEJ1_9STRA1.960e-2853.51Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835Z296_9STRA4.970e-2753.51NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A2D4BMW9_PYTIN3.050e-2550.94Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S4E5V8_9STRA4.610e-2548.62Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2WV54_9STRA7.770e-2555.45Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6G0XIW0_9STRA2.770e-2452.29Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A8K1FMG6_PYTOL3.510e-2450.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WST9_GLOUD4.830e-2450.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig903contigF-serratus_M_contig903:213220..217136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.1
Seed ortholog evalue7.8e-19
Seed eggNOG ortholog115417.EPrPW00000016698
Preferred nameNDUFA5
KEGG koko:K03949
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00146
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009507,GO:0009536,GO:0009853,GO:0009987,GO:0010257,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0042773,GO:0042775,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0065003,GO:0070469,GO:0071704,GO:0071840,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
EggNOG free text desc.NADH dehydrogenase. Source PGD
EggNOG OGs1MHEE@121069,KOG3365@1,KOG3365@2759
COG Functional cat.C
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Exons3
Model size387
Cds size387
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig903.20454.1prot_F-serratus_M_contig903.20454.1Fucus serratus malepolypeptideF-serratus_M_contig903 213220..217136 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932637.6650565-CDS-F-serratus_M_contig903:213219..2133541622932637.6650565-CDS-F-serratus_M_contig903:213219..213354Fucus serratus maleCDSF-serratus_M_contig903 213220..213354 +
1690964398.2820022-CDS-F-serratus_M_contig903:213219..2133541690964398.2820022-CDS-F-serratus_M_contig903:213219..213354Fucus serratus maleCDSF-serratus_M_contig903 213220..213354 +
1622932637.6827037-CDS-F-serratus_M_contig903:215753..2158371622932637.6827037-CDS-F-serratus_M_contig903:215753..215837Fucus serratus maleCDSF-serratus_M_contig903 215754..215837 +
1690964398.295168-CDS-F-serratus_M_contig903:215753..2158371690964398.295168-CDS-F-serratus_M_contig903:215753..215837Fucus serratus maleCDSF-serratus_M_contig903 215754..215837 +
1622932637.7314024-CDS-F-serratus_M_contig903:216968..2171361622932637.7314024-CDS-F-serratus_M_contig903:216968..217136Fucus serratus maleCDSF-serratus_M_contig903 216969..217136 +
1690964398.3053048-CDS-F-serratus_M_contig903:216968..2171361690964398.3053048-CDS-F-serratus_M_contig903:216968..217136Fucus serratus maleCDSF-serratus_M_contig903 216969..217136 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig903.20454.1

>prot_F-serratus_M_contig903.20454.1 ID=prot_F-serratus_M_contig903.20454.1|Name=mRNA_F-serratus_M_contig903.20454.1|organism=Fucus serratus male|type=polypeptide|length=129bp
MAFRASQALRMVVKKTSTGLVGLAVDVHARANFIAVQKQILNKIKMIPDH
AQYRKDVEAISNYRLKVATENEDEEKIEDIVDNGQLEELILDGKRELELI
EKYSEWRLWEAVEELDREKSEAAAQKDG*
back to top

mRNA from alignment at F-serratus_M_contig903:213220..217136+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig903.20454.1 ID=mRNA_F-serratus_M_contig903.20454.1|Name=mRNA_F-serratus_M_contig903.20454.1|organism=Fucus serratus male|type=mRNA|length=3917bp|location=Sequence derived from alignment at F-serratus_M_contig903:213220..217136+ (Fucus serratus male)
ATGGCTTTCCGAGCAAGCCAGGCTCTGCGAATGGTGGTGAAGAAGACCTC
TACGGGGCTCGTGGGACTCGCTGTCGACGTCCACGCTCGCGCAAATTTCA
TCGCCGTCCAGAAGCAGATCCTAAACAAGATCAAGGTAATTGAATCATTA
ATGCTGCTATTAATGCTGTTACAGTTACAATAGCGTGAATATGGGGTGTT
TTTACCGGTTGACGTTGACGTTGACAAACTGCCACCCTCTTGAAGAGGGC
TATTAATGGAGGAATATGAATATGCTAAGGTACTATTAATGGCGTGCCTC
TCATCTTCGTAGAAACACTTGGCCGGGGTCCTATTGATAGGGTTGACTCC
GAGGGTGGACGGTGACGGGTATTTTTTAGTGTAGTGTAGTGTAGTGTACT
GTGTAGTGTAGTGTAGTGTACTATGTCGTGTAGTGTAGTGTACTATGTAG
TGTAGTGTAGTGTAGTGTAGTGTAGTGTAGTGTAGTGTAGTGTAGTGTAG
TGTAGTGTAGTGTAGTGTAGTGTAGTGTACCCATGTTCTAAGTGGGAATA
AAAATACTTAATTATACTAGTAAAAGCGTTAATTACACGCTAAATTGTAA
CGGATTGTCGATATTACTCTCTCTGCCTTCTATGATCGTACCAAAACGAA
TACCTGGTAGTAGTTACGAGTAGGCCGCTTCAGTAGCGTTTGTGTACAGC
AGTACAAGAGTACAAAAGTGCAGTAATGTGGTGCAGTACAGCAGTACAAC
GAAACGTCCTCGGCGCGGGACTGTCATCTCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCAACGAAAGGTGCTGTATGTAGCAGAAAGAACCTTGCACCG
TAGTTTCGCAACCGCCGACAGTCGATACCTTCGCATATTGCTATTGCTTT
GCTATTGCTATTAATACTACTGTAATATAATACACACACTACTTTAATAA
TGTTAGATGCTATTAATAGCTCTCTCTGTGCACACGAATCCACACCCAAA
ACGATACAACACATCAGTACCGCAAACGTTTTTGCGTGTTTTTTCGGGGG
CGGGGAGGGGAGGAGAGGAGAAAAACGCCTCCCAAGCTAATTGGATGGCT
CAACTAATACCTACCAGTAGCTAAAGTATCCTGCTTGTGCCGCGGGCGCT
ACCGCCGGTTCTTTTTCTCAAAACACGAGTCTTTTACTATACTCAACTCT
TTTATTATACAAGTCCAGTCGTCCAGTACGGTACATGTACTATTATACTG
CGTTTAGTGGAGAGCTGAGCATCAGGATCTGACTTATCGCAGTTTTTTTG
TTTTTTGTTTTTTTGTTATATTGCACAAATATGTGTGTAAGGCCAACCTT
TATGGGAAACAGAAACGACATGAAAATACAGAAATGTGAAATTTCTCTGG
CGATTTTTTGTAAACGTGGCACTATGAGCCCCGTGCCGCAGAAATGTAGC
CCTACAGAAATGGCGAATTTCTGTGGGAGGTTATTTTTCTCTTCCCACAT
ACAGAAATGAGGCTCATTTCTGTATGTGGCTCGACAAGTTTAGTTTGCCG
CAGAAATGATTCACGCCTTCCAAGAACGATTGGGAGGTCGGGACTGTAGC
ATCCCTCCTATCAAATATCGGCAAAGAAGAGCTCGCGAGTGTTGTTGTAC
GATGGGTGCCGAGCAGCAGTAGTTGTGCGATGATCGCCGGAGCAGCAGAT
TTGGAGGAAATTTATAGAATATGTTGAGGTGATGGGCCCGGGCAAGCAGA
TTTGGAGGAAATTTATAAAAGCTGTTGAGGTGATGAGCCCGGACAAGCTG
ATCGCCGGCGGCGGGGGCGGTTGAATGGGTGGCGCCGGAGGTCAATCAAG
CAGGGACGGGCTGCGTGTCACGAGCGTCCGACGGCTCGCCATCGAAACGA
TGTCGCTCTGCCCACTCTATTTGCGATGTACTCGTAATTAAGTACTAGAT
GACCCTGTCTCGCCGGACTAAATTCTCGGGCACAAACGCGGAGAGGGAAA
TACTAATTTTCCCTGTTCAGTTGACCACGAGCAGGACTGGCAACCTTACC
CGGTTGATCCATACTCGCCATGTGTACATACTTGCATCTGTCTTTGTGCG
GTGATGGGTGGCCAAAAATGCCGGGGTTAACCCGATATGCTCCCCGTTTT
TTTTGTATTTTTCCTTTATCCCATAAACGACCAACTACAGTTTTTCCCCA
CGGATTTTTTGGCCACAGAAATGACAAATTTCTGTATTTTGCGTTTCTGT
TTTTTCGTTTCCCATAAAGGTTGGCCTAACTGTACATATGCTCCATGTTC
TTCGTTCTAGTTACTCTTGATATTTTTGAGGGGTTGTAAGTCCTCTGCTC
TACCCGAACTTCTCTGAGCCACTTTTAATACTATAGTATGATACTTACTA
CTTACTATGTATAGAGCATACATATTACTGATTTTTTGACACCCCACTCC
CCCCCCGCCAATCCAATCGCGCGATTGGGGTCGATGGGATTCGTTGTTGG
ATGGGTCTGTGATACGACGGCTTTTGAATAACAGATGATCCCGGATCACG
CGCAGTACCGCAAGGACGTCGAGGCGATCAGCAACTACAGGCTCAAGGTC
GCCACGGAGAATGAAGATGTACGTCCCGAGTTACCAAGTTGTCAGTATAG
TACTGAACTGCACCTTTATTGTGCTTTACTGCTGTGTTGAACTGCAATGT
AATTGTACCTTTACTGTGATCTACTGTGATGTGTTGTAATGGAGTACCTT
TGTTTTATCAGAATGGCATGTGGTTTTAGCGGAGTTACTGCCATGCCAAC
GATTTAGTCTCTCGTGTATATCACGGCTACTTTTATCTACGTTTATCTAC
TTTTAAATAGAAAATAAAATTTAAAATCGATTACGTTCAAGCACATTTCT
CTAGATGGCTTCGTTCTATTTAGTGAAATTATAACGTAATTGGTACTGTA
CAGGAAGCCTTTGTTCTAAGTACTGCTCCTCCTTACCATTATCTTTGATT
TGATTTTTTGGCCTACGCCAATCTTGTAACACCGAGTTGTCTAGACCTTT
GTTTTACCGCCACCATGGGGTATCGCTCCCGATTCAAATTCAGAATTTGA
CGAATTTCACGGCGATTTTTTTTATATATGTATATATACATATTGGCGCA
AAGGCCTAAGAGCGAGGAGGCTAGTTTGAAAGTCTTCGGAAGCGTTTCGC
AAAAGTGTGCTGTAGAATACATCTCGAACGGAAAGGTTTAAATCTCAAAT
GTAGACAATGATGCATTACATGTGTCTTGGTCTTGGTAATTGCGTGAGAA
ATGTGTATTGTTTATTGGGGCCGTTGCTCTATTATTAGAAATGCTGGCAA
AATATACCGTATACCGGGCTACAGAAGTACTGGGGTAGTGTAATAATAGT
TAGTTATGGAGCTACGCACGTAAAATATTTTTATTGTCTGTTGTCTAGTA
CCAGTATTGTTTTCTTTTCTTTTGCTTTGTTTTTTTTTCTTTACGGGGGG
AGGGGGGGTGGGTGGTTCCTCGTTGCTGCGTTGCTGCGGCCGAAAAATGG
CATCGAATCATTGGCACATGTGTTCTCTATTATACCTGGTACAACGTTTC
GGAGGGTTTGTATGAACATTAATAGCTTGGAAGTGAAGTGAACGGCGGAC
TAATTTTCCGCGCGCAGTCGGTTTTCCTCTATATATGATTTTACCACGAT
TGACTGCATCTACATGGTTGCCTATGTTTGTGATGTTGTGACGCTTCAGG
AGGAGAAGATCGAGGACATCGTGGACAACGGGCAGCTGGAGGAGCTCATC
TTGGACGGAAAGCGGGAACTGGAGCTGATCGAAAAGTACTCGGAATGGAG
GCTGTGGGAGGCCGTCGAGGAGCTCGACAGAGAGAAATCTGAGGCTGCGG
CCCAGAAGGATGGCTGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig903:213220..217136+

>mRNA_F-serratus_M_contig903.20454.1 ID=mRNA_F-serratus_M_contig903.20454.1|Name=mRNA_F-serratus_M_contig903.20454.1|organism=Fucus serratus male|type=CDS|length=774bp|location=Sequence derived from alignment at F-serratus_M_contig903:213220..217136+ (Fucus serratus male)
ATGGCTTTCCGAGCAAGCCAGGCTCTGCGAATGGTGGTGAAGAAGACCTC
TACGGGGCTCGTGGGACTCGCTGTCGACGTCCACGCTCGCGCAAATTTCA
TCGCCGTCCAGAAGCAGATCCTAAACAAGATCAAGATGGCTTTCCGAGCA
AGCCAGGCTCTGCGAATGGTGGTGAAGAAGACCTCTACGGGGCTCGTGGG
ACTCGCTGTCGACGTCCACGCTCGCGCAAATTTCATCGCCGTCCAGAAGC
AGATCCTAAACAAGATCAAGATGATCCCGGATCACGCGCAGTACCGCAAG
GACGTCGAGGCGATCAGCAACTACAGGCTCAAGGTCGCCACGGAGAATGA
AGATATGATCCCGGATCACGCGCAGTACCGCAAGGACGTCGAGGCGATCA
GCAACTACAGGCTCAAGGTCGCCACGGAGAATGAAGATGAGGAGAAGATC
GAGGACATCGTGGACAACGGGCAGCTGGAGGAGCTCATCTTGGACGGAAA
GCGGGAACTGGAGCTGATCGAAAAGTACTCGGAATGGAGGCTGTGGGAGG
CCGTCGAGGAGCTCGACAGAGAGAAATCTGAGGCTGCGGCCCAGAAGGAT
GGCTGAGAGGAGAAGATCGAGGACATCGTGGACAACGGGCAGCTGGAGGA
GCTCATCTTGGACGGAAAGCGGGAACTGGAGCTGATCGAAAAGTACTCGG
AATGGAGGCTGTGGGAGGCCGTCGAGGAGCTCGACAGAGAGAAATCTGAG
GCTGCGGCCCAGAAGGATGGCTGA
back to top