mRNA_F-serratus_M_contig903.20452.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: A0A6H5J9L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J9L0_9PHAE) HSP 1 Score: 304 bits (779), Expect = 3.430e-93 Identity = 321/411 (78.10%), Postives = 342/411 (83.21%), Query Frame = 3
Query: 240 GDRRGTPSSLHGKSKIKVASKIAAGYAAVKDGTQYPKTAAAAXXXXRIGLDGVDSGTAAASGAN---PSSASTAPSSDKQRDSEVTRIIQRLDAEKLDKARQRQEDKRRRGVDAVAGSSPSAATAGTLVLFNPSSGSVGGGEGRGDANQLVVSRRAAPSAPRPEWHAPWKLGAVVSAHLGWVRAIAFDPGNEWFVTGSADRTIKVWDLAKASAGSEGALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRMHPREFSFVSAAADNMKKWQARDGVFLNNLSGHNTIINCLSVNEDGVLVSG 1463
G P + KIKVASKIAAGYAAVKDG +AAA RIG AAA+G+N ++A+ AP ++K R++EVTRIIQR+D EK+DKARQ +A G+LVLFNPSSGSVGGGEG+G ANQLVVSRRAAPSAPRPEWHAPWKL +VVSAHLGWVRAIAFDP NEWFVTGSADRTIKVWDLAKASAG+E ALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MHP+EFSFVSAAADNMKKWQ RDG+FLNN+SGHNTIIN LSVNED VLVSG
Sbjct: 41 GQEGAPPPTFMASQKIKVASKIAAGYAAVKDGAPNGVASAAAA---RIGHT-----AAAANGSNGAPDTAAAPAPPAEKPRETEVTRIIQRIDEEKMDKARQXXXXXXXXXXXXXX-----SAADGSLVLFNPSSGSVGGGEGKGVANQLVVSRRAAPSAPRPEWHAPWKLSSVVSAHLGWVRAIAFDPSNEWFVTGSADRTIKVWDLAKASAGAEKALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHPKEFSFVSAAADNMKKWQGRDGMFLNNMSGHNTIINSLSVNEDSVLVSG 438
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: A0A7S2V5E3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5E3_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.150e-49 Identity = 228/265 (86.04%), Postives = 240/265 (90.57%), Query Frame = 3
Query: 669 ANQLVVSRRAAPSAPRPEWHAPWKLGAVVSAHLGWVRAIAFDPGNEWFVTGSADRTIKVWDLAKASAGSEGALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRMHPREFSFVSAAADNMKKWQARDGVFLNNLSGHNTIINCLSVNEDGVLVSG 1463
A L R PRPEWHAPW+L AV+S HLGWVR+IAFDP NEW+VTGSADRTIK+WDLAK SAG+EG LKLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYN+VVRHYH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ HP+EFSFVSAAADN+KKWQ +DGVFL NLSGHNTIINC +VNEDGVLVSG
Sbjct: 182 AGTLTKRRGGTTKVPRPEWHAPWRLQAVISGHLGWVRSIAFDPSNEWYVTGSADRTIKIWDLAKCSAGAEGGLKLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNKVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVVTHPKEFSFVSAAADNLKKWQCKDGVFLKNLSGHNTIINCAAVNEDGVLVSG 446
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: A0A835ZG42_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG42_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.220e-46 Identity = 228/260 (87.69%), Postives = 238/260 (91.54%), Query Frame = 3
Query: 684 VSRRAAPSAPRPEWHAPWKLGAVVSAHLGWVRAIAFDPGNEWFVTGSADRTIKVWDLAKASAGSEGALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRMHPREFSFVSAAADNMKKWQARDGVFLNNLSGHNTIINCLSVNEDGVLVSG 1463
V+RR PS P+P WHAPWKL +VVS HLGWVRAIAFDPGNEWF TGSADRTIKVWDLAK +AG+EG LKLTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLE N+V+RHYH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAL REFSFVSAAADNMK+WQARDG+FLNN+ GHN IIN LS NED VL SG
Sbjct: 118 VARRQGPSVPKPTWHAPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKVWDLAKCAAGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLECNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAAGKREFSFVSAAADNMKRWQARDGMFLNNMRGHNAIINTLSSNEDNVLFSG 377
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: A0A7S2SAC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAC3_9STRA) HSP 1 Score: 174 bits (441), Expect = 6.220e-45 Identity = 227/279 (81.36%), Postives = 242/279 (86.74%), Query Frame = 3
Query: 627 PSSGSVGGGEGRGDANQLVVSRRAAPSAPRPEWHAPWKLGAVVSAHLGWVRAIAFDPGNEWFVTGSADRTIKVWDLAKASAGSEGALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRMHPREFSFVSAAADNMKKWQARDGVFLNNLSGHNTIINCLSVNEDGVLVSG 1463
PSS ++ +G G + RR P P P WHAPWKL +VVS HLGWVRAIAFDPGN+WFVTG+ADRT+K+WDLAK SAG+ G LKL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E N+VVRHYH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX HPREFSFVSA ADN+KKWQ+RDG F+ NLSGHNTIIN L+VNEDGVLVSG
Sbjct: 68 PSSNALVVKQGLGGGVLALSGRRQPPKVPTPTWHAPWKLKSVVSGHLGWVRAIAFDPGNKWFVTGAADRTLKIWDLAKCSAGAAGGLKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQNKVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHPREFSFVSAGADNIKKWQSRDGKFMKNLSGHNTIINALAVNEDGVLVSG 346
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: A0A7S2CDV4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CDV4_9STRA) HSP 1 Score: 159 bits (403), Expect = 4.440e-39 Identity = 217/269 (80.67%), Postives = 232/269 (86.25%), Query Frame = 3
Query: 657 GRGDANQLVVSRRAAPSAPRPEWHAPWKLGAVVSAHLGWVRAIAFDPGNEWFVTGSADRTIKVWDLAKASAGSEGALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRMHPREFSFVSAAADNMKKWQARDGVFLNNLSGHNTIINCLSVNEDGVLVSG 1463
G G L R+ A P+P WHAPW+L AVVS HLGWVRAIAFDPGN WF TG+ADR +K+WDLAK + G++ L LTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E N+VVRHYH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX HPREFSF+SA ADN+KKWQ RDG F+ NLSGHNTIIN +VN+DGVLVSG
Sbjct: 146 GVGSTLALAAKRQPA-KVPKPAWHAPWRLKAVVSGHLGWVRAIAFDPGNRWFCTGAADRCLKIWDLAKCAVGADDGLMLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQNKVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKHPREFSFISAGADNLKKWQTRDGKFIRNLSGHNTIINATAVNDDGVLVSG 413
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: F0YMH0_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMH0_AURAN) HSP 1 Score: 150 bits (378), Expect = 5.390e-37 Identity = 208/248 (83.87%), Postives = 223/248 (89.92%), Query Frame = 3
Query: 717 PEWHAPWKLGAVVSAHLGWVRAIAFDPGNEWFVTGSADRTIKVWDLAKASAGSEGALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRMHPREFSFVSAAADNMKKWQARDGVFLNNLSGHNTIINCLSVNEDGVLVS 1460
P WH PWKL AVVS HLGWVR++AF+P NEWF TG ADRTIK+WDLAK +AG+EG LKLTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLE N+VVRHYH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +L + P EFSF S AADN+KKWQ +DG FL NLSGH+ I+N + VN+DGVL S
Sbjct: 1 PAWHPPWKLAAVVSGHLGWVRSVAFEPRNEWFATGGADRTIKIWDLAKCAAGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLAVAPFEFSFASGAADNIKKWQCKDGAFLRNLSGHDAIVNAVDVNDDGVLAS 248
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: A0A7R9U702_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U702_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.520e-32 Identity = 204/260 (78.46%), Postives = 220/260 (84.62%), Query Frame = 3
Query: 681 VVSRRAAPSAPRPEWHAPWKLGAVVSAHLGWVRAIAFDPGNEWFVTGSADRTIKVWDLAKASAGSEGALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRMHPREFSFVSAAADNMKKWQARDGVFLNNLSGHNTIINCLSVNEDGVLVS 1460
V +R P P+WHAPW+L AV+S HLGWVR+IAFDP NEWFVTGS+DRTIK+WDLAK SAG EG L+LTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYN+ +RHYH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AADN+KKW RDG F+ NL GH ++N L++NEDGVL S
Sbjct: 125 VARKRREAKVPIPKWHAPWRLSAVISGHLGWVRSIAFDPSNEWFVTGSSDRTIKIWDLAKCSAGLEGGLRLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNKTIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADNVKKWATRDGTFIKNLHGHRAVVNALAMNEDGVLAS 384
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: A0A8J6A9G9_GALPY (Pleiotropic regulator 1 n=1 Tax=Galemys pyrenaicus TaxID=202257 RepID=A0A8J6A9G9_GALPY) HSP 1 Score: 138 bits (347), Expect = 5.780e-31 Identity = 135/267 (50.56%), Postives = 158/267 (59.18%), Query Frame = 3
Query: 663 GDANQLVVSRRAAPSAPRPEWHAPWKLGAVVSAHLGWVRAIAFDPGNEWFVTGSADRTIKVWDLAKASAGSEGALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRMHPREFSFVSAAADNMKKWQARDGVFLNNLSGHNTIINCLSVNEDGVLVSG 1463
G+A + + AP+ P+P+WH PWKL V+S HLGWVR IA +PGN+WFVTGSADRTIK+WDLA G LKL+LT E +V+RHYHG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA+ +HPR ++F S + DN+K+W+ DG F+ NLSGHN IIN L+VN DGVLVSG
Sbjct: 279 GNAKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLAS------GKLKLSLTGHISTVRGVIVSTRSPYLFSCG----------EDKQVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSG 529
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: A0A7S1TVK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVK5_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.760e-30 Identity = 91/117 (77.78%), Postives = 101/117 (86.32%), Query Frame = 3
Query: 678 LVVSRRAAPSAPRPEWHAPWKLGAVVSAHLGWVRAIAFDPGNEWFVTGSADRTIKVWDLAKASAGSEGALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYH 1028
L ++R P P+WHAPW+L AV+S HLGWVR+IAFDPGNEWF TGS+DRTIK+WDLAK SAG EG L+LTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNR +RHYH
Sbjct: 7 LTPTQRKTTQVPVPQWHAPWRLSAVISGHLGWVRSIAFDPGNEWFATGSSDRTIKIWDLAKCSAGLEGGLRLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRTIRHYH 123
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Match: A0A7S2CUR5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUR5_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.610e-30 Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 2
Query: 1463 GDNGSLCMWDYRTGHSFQRIDTVAQPGSLDAEAGIFASSFDISGSRFITCEADKTVKIWKEDLEATPESHPVDMAAWAKAYQARKR 1720
GDNGSL WDY TG++FQ++DT+ QPGSLDAEAGI+A FD +G+R ITCEADKT+KIW ED AT +SHP+DM AW KA + KR
Sbjct: 109 GDNGSLHFWDYSTGYNFQQMDTIVQPGSLDAEAGIYAMGFDKTGTRLITCEADKTLKIWAEDDTATEDSHPIDMKAWTKACRQFKR 194 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig903.20452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig903.20452.1 >prot_F-serratus_M_contig903.20452.1 ID=prot_F-serratus_M_contig903.20452.1|Name=mRNA_F-serratus_M_contig903.20452.1|organism=Fucus serratus male|type=polypeptide|length=216bp MCWDLEYNRVVRHYHGHLSGVFCLSLHPTLDILVTGGRDSVARVWDMRTKback to top mRNA from alignment at F-serratus_M_contig903:162202..169518+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig903.20452.1 ID=mRNA_F-serratus_M_contig903.20452.1|Name=mRNA_F-serratus_M_contig903.20452.1|organism=Fucus serratus male|type=mRNA|length=7317bp|location=Sequence derived from alignment at F-serratus_M_contig903:162202..169518+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig903:162202..169518+ >mRNA_F-serratus_M_contig903.20452.1 ID=mRNA_F-serratus_M_contig903.20452.1|Name=mRNA_F-serratus_M_contig903.20452.1|organism=Fucus serratus male|type=CDS|length=1296bp|location=Sequence derived from alignment at F-serratus_M_contig903:162202..169518+ (Fucus serratus male)back to top |