mRNA_F-serratus_M_contig902.20447.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: A0A6H5L8Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q7_9PHAE) HSP 1 Score: 345 bits (886), Expect = 1.970e-111 Identity = 202/293 (68.94%), Postives = 222/293 (75.77%), Query Frame = 1
Query: 364 NVQAEIQISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELFGKFVKDWNRGKLDKNFYEGSLPEELVARTNKTQHKWGFVKKLSDRDQMQLESANDSVHASTE-VKGVSSNVPVLPAGSAKVAVAGAGTGVVSSASRDGRRPERGNAGGKGNADEGKSDSERRSTAKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRESEIMGGGDGFQERLARAKMGQQRRQAAKTEHLQGLAAKEAEKRAAFMAQMGLKAGQKITIQPRKNG 1239
++QAEIQISEKDYF RA EFKVWL KK+ FEDLTS++SHELF KFVKDWNRGKLD +FYEG LP+EL+ART KTQH+WGFV +LSDRDQMQLE ANDSVH+STE VKG +SNVPVLP GSA A G+V DGR G REKHAVVLDEIAPKETG QA LDKRR VGARTHAAAKEREDAADGLDM+ES+ MGG D F+E LARA+ G+QRRQ AKTEHLQGLAAKE EKRAAFMAQMGLKAGQKITIQPR++G
Sbjct: 100 SIQAEIQISEKDYFIRAMEFKVWLCHKKETLFEDLTSDESHELFDKFVKDWNRGKLDPHFYEGRLPDELIARTKKTQHRWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPIGSAATA-----PGLVVKKQADGR------GGDXXXXXXXXXXXXXXXXXXXXXXXXXREKHAVVLDEIAPKETGRQAVLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKQRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 381
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: D8LTC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC9_ECTSI) HSP 1 Score: 336 bits (862), Expect = 3.550e-109 Identity = 198/287 (68.99%), Postives = 215/287 (74.91%), Query Frame = 1
Query: 382 QISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELFGKFVKDWNRGKLDKNFYEGSLPEELVARTNKTQHKWGFVKKLSDRDQMQLESANDSVHASTE-VKGVSSNVPVLPAGSAKVAVAGAGTGVVSSASRDGRRPERGNAGGKGNADEGKSDSERRSTAKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRESEIMGGGDGFQERLARAKMGQQRRQAAKTEHLQGLAAKEAEKRAAFMAQMGLKAGQKITIQPRKNG 1239
+ISEKDYF RA EFKVWL KKK FFEDLTS++SHELF KF+KDWNRGKLD +FYEG LP+EL+ART KTQHKWGFV +LSDRDQMQLE ANDSVH+STE VKG +SNVPVLP GSA A GVV DGR G EKHAVVLDEIAPKETG QA LDKRR VGARTHAAAKEREDAADGLDM+ES+ MGG D F+E LARA+ G+ RRQ AKTEHLQGLAAKE EKRAAFMAQMGLKAGQKITIQPR++G
Sbjct: 13 KISEKDYFIRAVEFKVWLCHKKKKFFEDLTSDESHELFDKFIKDWNRGKLDPHFYEGRLPDELIARTKKTQHKWGFVNRLSDRDQMQLELANDSVHSSTEKVKGATSNVPVLPVGSAATA-----PGVVVGKQADGR------GGDXXXXXXXXXXXXXXXXXXXXXXXXXXEKHAVVLDEIAPKETGRQALLDKRRVVGARTHAAAKEREDAADGLDMKESDTMGGSDSFRETLARAQHGKHRRQMAKTEHLQGLAAKEEEKRAAFMAQMGLKAGQKITIQPRRDG 288
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: A0A3F2RY91_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY91_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.260e-45 Identity = 117/295 (39.66%), Postives = 180/295 (61.02%), Query Frame = 1
Query: 385 ISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELF-GKFVKDWNRGKLDKNFYEGSLPEELVARTNKTQHKWGFVKKLSDRDQMQLESANDSVHASTEVKGVSSNVPVLPAGSAKVAVAGAGTGV-VSSASRDGRRPERGNAGGKGNADEGKSDSERRSTAKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRESEIMGGG-----DGFQERLARAKMGQQRRQAAKTEHLQGLAAKEAEKRAAFMAQMGLKA----GQK-ITIQPRK 1233
ISE DYF RA EF+VWL + K + +DL++E++ +LF G FV+ WNRGKL + FY+G LP+ ++ +T +T+H+WGFV KL ++++ L +A DSV +T+ K + ++ G G V R+ +R N+ KG +E K ++ +R +K +R++E+E V+DE+APKETG +A + KRR +G + H AA++RED DGLD+ E +MGGG D FQ R+A+ ++R+Q + L GLAAKE+ + F+ MGL G+K +TI PR+
Sbjct: 67 ISEDDYFLRATEFRVWLTQSKGKYVDDLSTEEATQLFRGDFVRKWNRGKLAEMFYKG-LPDAVLEQTKRTRHRWGFVAKLGEKEKFALATAKDSVDVATKKKDLLNS----------------GNGASVKDPPREKTETDRSNSRRKGREEEDKEETWKR---RKVERKKEKEYRDTVMDELAPKETGREAQIQKRRQLGEKLHGAARDREDTRDGLDVSEDFLMGGGRHGGEDDFQRRMAQRDSARRRKQGEQQAKLAGLAAKESARMDKFLEDMGLAGANTNGRKPMTIAPRR 341
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: A0A836CIB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB7_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.300e-41 Identity = 98/228 (42.98%), Postives = 130/228 (57.02%), Query Frame = 1
Query: 379 IQISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELFGKFVKDWNRGKLDKNFYEGSLPEELVARTNKTQHKWGFVKKLSDRDQMQLESANDSVHASTEVKGVSSNVPVLPAGSAKVAVAGAGTGVVSSASRDGRRPERGNAGGKGNADEGKSDSERRSTAKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRESEIMGGG 1062
++++E DYF R EF VWL ++ FE+L+S+ +H+ F KF K+WN GKL+ +Y G++PE+ VA KTQH WGFVK+++DRD+ L++A +S+ T + S AG + A T +V RP GG G D G S R K HA LDEIAPKETG QA +DKRR VGA H AA+ERE DGLD+ E + MGGG
Sbjct: 58 VKLTEDDYFVRVDEFSVWLLDHRRKRFEELSSKDAHKQFAKFCKEWNAGKLEPTYYSGAIPEDKVAAAKKTQHSWGFVKRMTDRDKSTLKAATNSIKTDTAITKAS-------AGGSTACAASHATNMV--------RPSVAPRGG-GEGDTGGSRGHGRGGGLKAV-------HAAALDEIAPKETGRQAAIDKRRTVGAAMHGAAREREFQRDGLDLPEQDTMGGG 262
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: H3H526_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H526_PHYRM) HSP 1 Score: 153 bits (386), Expect = 1.440e-38 Identity = 101/261 (38.70%), Postives = 159/261 (60.92%), Query Frame = 1
Query: 382 QISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELF-GKFVKDWNRGKLDKNFYEGSLPEELVARTNKTQHKWGFVKKLSDRDQMQLESANDSVHASTEVKGVSSNVPVLPAGSAKVAVAGAGTGVVSSASRDGRRPERGNAGGKGNADEGKSDSERRSTAKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRESEIMGGGDG-----FQERLARAKMGQQRRQAAKTEHLQGL 1146
+ISE+DYF R EF+VWL + K + +DL+++++ ELF +F K WNRGKL FYEG LP+ +V +T +T+H+WGFV KL ++++ +L +A DSV +T+ + + L +GS + +V G +S+ RR A E + D E + +K +++ERE V+DE+APK TG +A ++KRR + + H AA++R+DA DGLD+ E +MGGG G F+ R+A+ ++R+Q + E L GL
Sbjct: 55 KISEEDYFLRQTEFRVWLAQTKGKYVDDLSTDEATELFTDQFAKKWNRGKLSTMFYEG-LPDAVVEQTKRTRHRWGFVAKLGEKEKFELATAKDSVDVATKRENL------LSSGSKRESVKGPQLEEDRDSSKSKRR-----------AKELEEDKEEQWRRRKLDQKREREYRDTVMDELAPKATGREAQIEKRRQLSQKLHGAARDRDDARDGLDVSEDFLMGGGRGDGDEEFKRRMAQRDSTRRRKQEMQEEKLAGL 297
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: A0A067BZG8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZG8_SAPPC) HSP 1 Score: 152 bits (384), Expect = 1.900e-38 Identity = 102/285 (35.79%), Postives = 153/285 (53.68%), Query Frame = 1
Query: 382 QISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELFGKFVKDWNRGKLDKNFYEGSLPEELVARTNKTQHKWGFVKKLSDRDQMQLESANDSVHASTEVKGVSSNVPVLPAGSAKVAVAGAGTGVVSSASRDGRRPERGNAGGKGNADEGKSDSERRSTAKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRESEIMGGGDGFQERLARAKMGQQRRQAAKTEHLQGLAAKEAEKRAAFMAQMGLKAGQ-KITIQPRK 1233
+IS DYF +A+EF+VWL +KK +FEDLTS+ + + F KF + WN GKLD +Y S+P+ ++ N+T+HKWGF+K L++ +++ L S D+V +T G SS+ T S A+ R ++ D R K K +V++E+APK TG AT++K+R A H AA+ +EDA DGLD+ + +MGG D F R+ R K Q +RQ K + + EA + F+ MG++ GQ +ITI PR+
Sbjct: 36 RISRDDYFEKAREFRVWLKTEKKRYFEDLTSDDAMQYFDKFARRWNDGKLDAMYY-ASIPQHILESVNRTKHKWGFLKNLNESERLHLASTKDTVDITTNKSGASSS-----------------TARPSKATSPPRSSKQQXXXXXXXXXXXXXDKYERKRYHKHKE--------LVMEELAPKATGRDATVEKKREKAATLHGAARAKEDAKDGLDLSDDFLMGGSDDFHARIQRRKAAQDKRQDEKQQRVTAAQEAEAARMQKFLQDMGIQPGQDRITIAPRQ 294
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: A0A485KJU9_9STRA (Aste57867_8246 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJU9_9STRA) HSP 1 Score: 151 bits (381), Expect = 7.180e-38 Identity = 106/287 (36.93%), Postives = 159/287 (55.40%), Query Frame = 1
Query: 376 EIQISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELFGKFVKDWNRGKLDKNFYEGSLPEELVARTNKTQHKWGFVKKLSDRDQMQLESANDSVHASTEVKGVSSNVPVLPAGSAKVAVAGAGTGVVSSASRDGRRPERGNAGGKGNADEGKSDSERRSTAKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRESEIMGGGDGFQERLARAKMGQQRRQAAKTEHLQGLAAKEAEKRAAFMAQMGLKAGQ-KITIQPRK 1233
++QISE DYF +A EF+VWL +K+ +F+DLTS + FGKFV WN GKLD +Y +P+ ++ +T+HKWG K+++ ++++L S D+V ST KG + P A + + +S RD D R AK+ K+ + K +VL+E+APK TG +AT++K+R V A H AA++ EDA DGL + ++ +MGG D FQ R+ R K Q RR + + + EA + F+A MG++ GQ +ITI PRK
Sbjct: 45 DVQISEDDYFEKALEFRVWLKLEKRLYFDDLTSADAQGYFGKFVHKWNGGKLDSMYYT-KIPQHILEGIQRTKHKWGL--KMNETERLELASTKDTVDISTN-KGTNHPPPYKSHPQTSKATSAS----FASKKRD--------------DDSDXXXXXERKRAKRDKKTYVKHKE-MVLEELAPKATGREATIEKKRQVAASVHGAARQNEDAKDGLTLSDAFLMGGSDDFQARVQRRKHAQDRRVEEQQQRVTAAQEAEAARMQKFLADMGIQPGQERITIAPRK 308
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: A0A7S2SFF4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFF4_9STRA) HSP 1 Score: 145 bits (367), Expect = 6.340e-36 Identity = 117/295 (39.66%), Postives = 154/295 (52.20%), Query Frame = 1
Query: 385 ISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELFGKFVKDWNRGKLDKNFYEGSLPEELV-ARTNKTQHKWGFVKKLSDRDQMQLESANDSVHAST--EVKGVSSNVPVLPAGSAKVAVAGAGTGVVSSASRDGRRPERGNAGGKGNADEGKSDSERRSTAKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRES--EIMGGG--DGFQERLARAKMGQQRRQAAKTEHLQGLAAKEAEKRAAFMAQMG---LKAGQKITIQPRKNG 1239
I ++DY+ +A EFKVWL K + A F++L+S++S ELF KFV WN+ KLD FY G LP L + T T+HKWGF K+L++ DQM L SA DSV +T + + +N+P K+ + P R A AD+ + + RE HA LDE+APK TG A LDKRR A+ H AA+ E DGLD ++MG D Q RL R + RR+A K E + GL A+E K +FM MG L GQ+I IQPR G
Sbjct: 34 IGDEDYYRKAVEFKVWL-KLRGATFDELSSDESRELFSKFVSHWNKHKLDSMFYTG-LPSHLTDSVTGFTKHKWGFTKRLTESDQMTLASAKDSVQVATNSQQRKQQANLPGAGWSRQKLEI-----------------PRRREA-----ADDESASRDLDXXXXXXXXXXXREDHATYLDEVAPKATGRDARLDKRRAKDAQVHGAARAAEGLQDGLDAASQGLDLMGTSRDDDLQARLQRRQAHMGRREAEKAERIAGLQAREKAKMDSFMRDMGIAGLAPGQRIQIQPRPPG 304
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: W4GDA5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GDA5_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.520e-35 Identity = 103/287 (35.89%), Postives = 161/287 (56.10%), Query Frame = 1
Query: 376 EIQISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELFGKFVKDWNRGKLDKNFYEGSLPEELVARTNKTQHKWGFVKKLSDRDQMQLESANDSVHASTEVKGVSSNVPVLPAGSAKVAVAGAGTGVVSSASRDGRRPERGNAGGKGNADEGKSDSERRSTAKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRESEIMGGGDGFQERLARAKMGQQRRQAAKTEHLQGLAAKEAEKRAAFMAQMGLKAGQ-KITIQPRK 1233
E ++ DYF +AKEF+VWL +K +F+DLTS + F KFV WN +L+ +Y +P++++ ++T+HKWGF K++D ++++L S D+V ST K +S P LP+ S A + A +S+ R+ D+ D R AK+ ++ + K +V +E+APK TG A ++K+R VGA H AA++++DA DGL + E +MGG D FQ R+ R K Q RR + + EA + F+A MG++ GQ +ITI PR+
Sbjct: 38 ETTLTVDDYFQKAKEFRVWLKLEKGVYFDDLTSADAQAAFEKFVSKWNANRLESMYYT-KIPQQVLESVHRTKHKWGF--KMNDHERLELASTKDTVDISTN-KETTSARPALPSHS--TATSRATPKQPASSPRE--------------VDDSDDD---RKRAKRDRKAYNKHKD-MVHEELAPKATGRDAAIEKKRQVGAAVHGAARQKDDAKDGLTLSEDFLMGGSDDFQARVQRRKQAQGRRAEEMNQRVTAAKDAEAARMQKFLADMGIQPGQERITIAPRQ 300
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Match: A0A5D6Y8C8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C8_9STRA) HSP 1 Score: 143 bits (361), Expect = 5.740e-35 Identity = 114/313 (36.42%), Postives = 163/313 (52.08%), Query Frame = 1
Query: 382 QISEKDYFARAKEFKVWLFKKKKAFFEDLTSEQSHELFG-KFVKDWNRGKLDKNFYEGSLPEELVARTNKTQHKWGFVKKLSDRDQMQLESANDSVHASTEVKGVSSNVPVLPAGSAKVAVAGAGTGVVSSASRDGRRPERGNAGGKGNADEGKSDSERRST------------------------AKKQKRRQEREKHAVVLDEIAPKETGHQATLDKRRGVGARTHAAAKEREDAADGLDMRESEIMGG-GDGFQERLARAKMGQQRRQAAKTEHLQGLAAKEAEKRAAFMAQMGLKA--GQKITIQPRKN 1236
+ISE D+F RA EF+VWL + K + EDLT++++ LF KFVK WNRG+L + FYEG +PE ++ +T +T+H WGF +LSD++ MQL SA DSV +T + + P PA + R R +AD A +++ RQ RE VL+E+APKETG +A L+KRR V + H AA++RE+ DGLD+ ++ +MGG G Q RL + + RRQ + + L AKEA + F+ MG+ A G+ ITI PRK+
Sbjct: 28 EISEDDFFLRATEFRVWLAQTKNKYVEDLTTQEASALFQRKFVKKWNRGRLARMFYEG-IPEHVLEQTRRTKHTWGFAARLSDKEAMQLASARDSVGVATRKTDLLAT-PRAPAAPEPEPL-----------ERSSRTHH--------DADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHADRKRHRQHRES---VLEELAPKETGREAALEKRRQVAGKLHGAARDREENRDGLDVSDAFLMGGSGSDLQHRLQAREQARDRRQQEQQDKLDEFKAKEAARMDKFLQDMGISATAGKPITIAPRKH 316 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig902.20447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig902.20447.1 >prot_F-serratus_M_contig902.20447.1 ID=prot_F-serratus_M_contig902.20447.1|Name=mRNA_F-serratus_M_contig902.20447.1|organism=Fucus serratus male|type=polypeptide|length=402bp MPKSKEKESGGGKEKKTKKRRREEKERSPSEEKHSSRRKHNSESSGGRDSback to top mRNA from alignment at F-serratus_M_contig902:296544..304833+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig902.20447.1 ID=mRNA_F-serratus_M_contig902.20447.1|Name=mRNA_F-serratus_M_contig902.20447.1|organism=Fucus serratus male|type=mRNA|length=8290bp|location=Sequence derived from alignment at F-serratus_M_contig902:296544..304833+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig902:296544..304833+ >mRNA_F-serratus_M_contig902.20447.1 ID=mRNA_F-serratus_M_contig902.20447.1|Name=mRNA_F-serratus_M_contig902.20447.1|organism=Fucus serratus male|type=CDS|length=2412bp|location=Sequence derived from alignment at F-serratus_M_contig902:296544..304833+ (Fucus serratus male)back to top |