mRNA_F-serratus_M_contig902.20427.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig902.20427.1
Unique NamemRNA_F-serratus_M_contig902.20427.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: D7FI09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI09_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 5.020e-136
Identity = 195/304 (64.14%), Postives = 229/304 (75.33%), Query Frame = 1
Query:    1 ALPTMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAP-AGKKDGGTCDIFKREFDRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEKNIVGRVSWLDLQDGLRKVQEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAELRMML 909
            A PTM TCS EA S+V R DY++PDRRGVS  H S    +RSKPFLHDS+YE+DF NFS EV+ L     P  G++DG     FKREFDR+D G+G + IRD+P +++G LG DVRPWI DR+LK FE    G+V+WLDLQDGLRKV E A+++ S K R +PEW+V   KV  PAVTHG+V  SCYQ DMGK GE+PR+RRIWYK GMSST+LDLF+GTTK TY VPGYGGF+PASK N RAREHGDM   R  R D  LFY HN  GYTGHAPAA CND GP+RCGS+PLTTSGAA L ++L
Sbjct:   14 APPTMTTCSSEAFSNVTRGDYQVPDRRGVSAKHFSAKPQDRSKPFLHDSLYEHDFRNFSDEVDGLDGGEGPRGGERDGENA--FKREFDRLDAGNGVVHIRDMPKLIQGVLGRDVRPWILDRILKMFEAKRDGKVTWLDLQDGLRKVAESARSDVSYKEREMPEWLVANRKVM-PAVTHGQVTESCYQMDMGKDGEIPRDRRIWYKTGMSSTTLDLFEGTTKATYQVPGYGGFIPASKMNLRAREHGDMKNSRRPRLDLRLFYRHNNPGYTGHAPAAACNDPGPSRCGSDPLTTSGAAALGIIL 314          
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A835ZLH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLH4_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.310e-63
Identity = 123/324 (37.96%), Postives = 178/324 (54.94%), Query Frame = 1
Query:   10 TMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGK---------YLAPA-----------GKKDGGTCDIFKREFDRMDKG---SGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEKNIVGRVSWLDLQDGLRKVQEFAKAEASQKGR-AVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAELRMML 909
            T+ T S E++SHV ++D+R P +RG   + ++   + R+KPFLH ++++  + + ++E+E             +LA A           G                  +G   S TID+  +P ++        R W+ DR+ KA E +  G+V W      L +V   A  + S   R A+PEWV+   K   P + HG+ + SCYQ D+G  G  P  R++ +KRGM  T+ DLF+GTTK+T+HVPGYGGF+PASK NARA +HGDM   R+   +  LF+ HN  GYTGH   A CNDRG   CG++P TTSGAA L ++L
Sbjct:   63 TIKTVSAESTSHVTKQDFRPPGKRGCQAATAAA-AVARTKPFLHSTLHKESYRDINQEIEGFAAASVEAYRCAFLAAARDVQATSISLCGSSGXXXXXXXXXXXXXXSEGPMASPTIDVNQIPGLLVAVHSKPPR-WLADRLRKACEGDRSGQVRWDTFVAALARVLSTASKDGSLLVRTAMPEWVLISRKAH-PTIQHGKRITSCYQHDVG--GAAPAQRQLTFKRGMRGTTQDLFEGTTKDTFHVPGYGGFIPASKVNARAMQHGDMQDARAYSANLRLFHKHNMAGYTGHQGHAACNDRGELLCGTHPATTSGAAALGLLL 381          
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A7R9UFG0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFG0_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.620e-53
Identity = 116/298 (38.93%), Postives = 157/298 (52.68%), Query Frame = 1
Query:   19 TCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYL-APAGKKDGGTCDIFKREFDRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEKNIVGRVSWLDLQDGLRKVQEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAELRMML 909
            T ++ A++ VR   Y  PDRRGVS      N     K F+  +VY +DF +   ++ +L     +PA          F++ F    +G G +D   +P V++ ALG      IK +   AF K+  G VSW D +  L ++ E A  E S  G +VPEW+V   K   P V  G  L+SCYQ DMG   E P+ +   YK GM STS DL +GTTK+TYH+PGY GF+P S+ N+ A    +  + R+ R            GYTGH P+ + NDRGP  CG NPLTT+GA     ML
Sbjct:   53 TITKAATTLVRPRLYSAPDRRGVSALFEESNKA-LPKRFMGSTVYRSDFIDLRADLVKLQDACRSPAA---------FQKAFFHYSRG-GELDTMLLPKVLDMALGERASEGIKSKFAAAFSKSRAGFVSWDDFRQKLGQILEAAVKEGSSGGVSVPEWLVLSSKPI-PKVIVGPALKSCYQCDMGLRNENPQTKPYTYKAGMYSTSYDLLRGTTKDTYHLPGYDGFIPESRRNSFAITQVNAKRTRASRERIAENVKPAVSGYTGHIPSNLINDRGPPLCGLNPLTTTGAGARHWML 338          
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: G4ZGI1_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZGI1_PHYSP)

HSP 1 Score: 143 bits (360), Expect = 1.880e-36
Identity = 102/309 (33.01%), Postives = 150/309 (48.54%), Query Frame = 1
Query:   10 TMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREFDRMDKGSG-TIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEK--NIVGRVSW------LDLQDGL--RKVQEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHG------DMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
            T  +   ++  HV+ EDYR+PDRRGVSV+    +    SKPF+ +S Y +DF  F +E  ++     P  + +     + KR         G TI +  V  V++ ALG    P + +      ++  ++  ++SW      +D  D L  R++     A ++ K      +     K     + H     S YQ D G YGE PR+R    KRGM+ST++D+  GT++ T  +PGY GF+P +  NA A  H       D L P + R    LF+S N  GYTGH P    N RG  R GS+P TT+G
Sbjct:   56 THESMGMQSGQHVQPEDYRVPDRRGVSVNQPRPS----SKPFIANSTYLHDFPAFDEERRRV--LTVPLEEYERAFMAVAKRNNXXXXXQVGPTIQLAQVQEVLQLALGDGAVPRVVEVFHSFLDRRGSVRDKISWGLFRQAVDHVDDLFDRELNRATTASSTSKTWGSTSFA---DKQLNEYLVHSSTPASSYQMDFGTYGENPRDRPYMRKRGMASTTMDMNPGTSRVTNQIPGYAGFLPLTSHNAEALAHANGPEDIDSLHP-TPRVALRLFHSDNIPGYTGHKPVDCVNYRGECRAGSDPGTTTG 354          
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A329T0D6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T0D6_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.750e-34
Identity = 92/287 (32.06%), Postives = 142/287 (49.48%), Query Frame = 1
Query:   46 VRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREFDRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEK--NIVGRVSWLDLQDGLRKVQEFAKAE---ASQKGRAVPEW--VVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
            V+ EDYR+PDRRGVSV+    +    SKPF+ ++ Y +DF  F +E  ++     P  + +     + K+  ++  +G+ TI +  V  V++ ALG    P + D      ++  N   R+SW      +  V      E         ++  W  +    K     + H     S +QKD G YG+ P +R    KRGM+ST+ DL   T++ T  +PGYGGF+P +  +A A+ + + L P + R    L++S N  GYTGH      N RG  R GS+P TT+G
Sbjct:   68 VQPEDYRVPDRRGVSVNQKQPD----SKPFIANTTYLHDFPEFDEERRRV--LHLPLEEYERAFMAVAKKTNNQQQEGA-TIQLNQVQEVLKLALGDAAAPRVIDVFHSFLDRRGNTRDRISWALFSQAVDHVNSLFDLELHHGKTAASSIKTWGTMTFAEKQLNEYLVHSSTPASSHQKDFGTYGDNPLDRPYMRKRGMASTTADLNPATSRVTNQIPGYGGFLPLTSHSAEAQANDEELLP-TPRIALRLYHSENIPGYTGHKAVDCANYRGECRAGSDPGTTTG 346          
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: D0NLJ8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLJ8_PHYIT)

HSP 1 Score: 126 bits (317), Expect = 2.660e-30
Identity = 93/294 (31.63%), Postives = 136/294 (46.26%), Query Frame = 1
Query:   46 VRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQ-----LGKYLAPAGKKDGGTCDIFKREFDRMDKGSGT-IDIRDVPCVVEGALGCDVRPWIKDRMLKAFEK--NIVGRVSWLDLQDGLRKVQEFAKAEASQKGRAVPEWVVPKHKVT------KPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
            V+ EDYR+PDRRGVSV+    N    SKPF+ ++ Y +DF  F  +  +     LG Y              F     + ++  GT I +  V  V++ ALG    P + D      ++  +   R+SW      +  V      E    G+ +P  +     +T         + H     S +QKD G YG+ P +R    KRGM+ST+ DL    T+ T  +PGYGGF+P       A+ +   L+P + R +  L++S N  GYTGH P    N RG  R GS+  TT+G
Sbjct:   68 VQPEDYRVPDRRGVSVNQKQPN----SKPFIANTTYLHDFPPFGDDCRRALQVTLGDYET-----------AFVAVAKKNNQHDGTMIQLLQVSEVLKLALGDAAAPRVIDLFHSYLDRGGSSRDRISWALFCQAVDHVNSLFDHELHH-GKTLPSSIKTWGTMTFTEKQFNEYLVHSSTPASSHQKDFGTYGDNPLDRPYMRKRGMASTTADLNPAATRVTNQIPGYGGFLPLESHRTEAQTNDKDLRP-TPRIELRLYHSENIPGYTGHKPVDCANYRGECRAGSDLDTTTG 344          
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: H3H106_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H106_PHYRM)

HSP 1 Score: 126 bits (316), Expect = 4.290e-30
Identity = 95/308 (30.84%), Postives = 144/308 (46.75%), Query Frame = 1
Query:   10 TMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREFDRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEK--NIVGRVSWLDLQDGLRKV-----QEFAKAEASQKGRAVPEWVVPK---HKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARA------REHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
            T  + + ++   V+ EDYR+PDRRGVSV+ +        KPF+  S Y++DF  + +E  ++        + +     + K    + D+   TI +  V  V++  LG    P + +      ++  ++  RVSW   +  +  V     +E  + E +  G    +W   K    K     + H     S +Q D G YG  PR+R    KRGM+ST+ DL  GT++ T  +PGY GF+P +  NA A       E    L P + R    LF+S N  GYTGH P    N RG    GS+P TT+G
Sbjct:   56 THESVAMQSGQVVQPEDYRVPDRRGVSVNQTRPEF----KPFISSSTYQHDFPAYDEERRRV--LHVSVEEYENAFMTVAKSVGQQQDE--ATIQLAQVQEVLKLVLGDAAVPRVVEMFHSYVDRRGSVRDRVSWRLFRQAIDHVNNLLDRELHRGETANSGS---KWWGSKTFAEKQLDEFLVHSSTPPSTHQIDFGTYGGNPRDRPYMRKRGMASTTTDLNPGTSRVTNQIPGYAGFLPLTSHNAEAVAQATGPEEIGRLHP-TPRVALRLFHSDNIPGYTGHKPVDCANYRGECLAGSDPGTTTG 351          
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A1V9ZS18_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS18_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.930e-29
Identity = 94/297 (31.65%), Postives = 139/297 (46.80%), Query Frame = 1
Query:    7 PTMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREFDRMDKGSGTID--IRD-VPCVVEGALGCDVRPWIKDRMLKAFEKNIVGRVSWLDLQDGLRKVQEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRR-IWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
            PT  +  +     V + DY     RG   SH   N +   K FL  S+YE DF +F  +    GK L    +++      +KR FD + +  G      RD V  ++    G      + D     F+    G ++W   ++ L ++  F  + A+ K    P W+     ++   +  G +  S +Q D G YG  P  R  +   +GM+ST+ DL  GTTK T+H+P YGGFMP +  N  A   GD  +PRSK  D  L++ +N  GYTGH P    N RG A  G++  TT+G
Sbjct:   50 PTFGSVYRADFGLVTKADYVS---RGPKESH---NDVVAGKKFLGQSLYETDFVHFQNQ----GKALLEMPREE------YKRAFDALAEAGGQEPRLSRDLVKELLTAVYGTPPSARMLDIYAHMFDPIADGYITWPVFEEALERLTLFV-SNATSKLHGKPSWM---EYLSLRRLLPGTMPSSSHQIDYGTYGSDPLARPYLGRTKGMASTTSDLADGTTKNTFHIPRYGGFMPEAPHNPTAVAQGDCPQPRSKGADLRLYHLNNIPGYTGHKPVDSKNVRGEAATGTDQRTTNG 326          
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A8K1C9E0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9E0_PYTOL)

HSP 1 Score: 123 bits (309), Expect = 4.900e-29
Identity = 92/326 (28.22%), Postives = 148/326 (45.40%), Query Frame = 1
Query:   25 SQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREF-------------DRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEKNIVG--------------RVSWLDLQDGLRKV-----QEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAELRMM 906
            + +++  V+ EDY++P R+G S +          K  +  S Y++DF  + +E      +L+   ++       F+R F             DR +  S ++++R V  VVE AL   V P +    +    +  V                ++W   +  L  +     +E  +A  ++    VP           PA T      S +Q D G YG+ PR+R    +RGM+ST+ DL  GT ++TYH+PGY GF+P ++ N  A  HG+    R ++ +  LF+S N  GY GH P    N RG  R GS+P T++G A +  M
Sbjct:   61 ASQSAQLVQPEDYKVPTRKGSSPTKGDH------KKMITPSTYQHDFPAYDEEKRA---FLSVDAER-------FERAFQAVVSSLEATQDADRSNNQSQSLELRHVSRVVELALRDTVVPNVSVAAIPRIAEQFVSYFDHQPPRSSPFRDNLTWDAFRGALDHISSVMERELGRAPTTRVSSKVPGMAKLDLAKLIPATTPA----SGHQLDFGMYGDNPRDRPYMRRRGMASTADDLQPGTARDTYHMPGYAGFLPMARHNPDAVAHGEGADLRGRKFEMRLFHSENIPGYAGHKPIDCVNYRGECRAGSDPKTSTGTAFIPHM 366          
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A7S2FHF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHF5_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.660e-28
Identity = 60/142 (42.25%), Postives = 78/142 (54.93%), Query Frame = 1
Query:  472 GRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAEL 897
            G  VPEWV     +T+  V   + +RS YQ DMG   E P +R    K GM+ T+ DL  GTTK TYH+PG+ G +P ++ N R   HGD  K         L++ HN  GYTG  P    ND+G    G+NP T+SGA+ L
Sbjct:  117 GATVPEWVTASKAITEDVVPR-QPVRSSYQTDMGMANEKPLDRPYISKTGMAGTTQDLCAGTTKATYHIPGFSGHIPTTQRNPRVVAHGDGQKVHDMPSHLRLYHRHNMPGYTGFRPTNAKNDKGERHSGANPATSSGASAL 257          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI09_ECTSI5.020e-13664.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLH4_9STRA1.310e-6337.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UFG0_9STRA1.620e-5338.93Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
G4ZGI1_PHYSP1.880e-3633.01Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A329T0D6_9STRA1.750e-3432.06Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
D0NLJ8_PHYIT2.660e-3031.63Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
H3H106_PHYRM4.290e-3030.84Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1V9ZS18_9STRA1.930e-2931.65Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8K1C9E0_PYTOL4.900e-2928.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2FHF5_9STRA1.660e-2842.25Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig902contigF-serratus_M_contig902:54987..57834 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.0
Seed ortholog evalue5.1e-106
Seed eggNOG ortholog2880.D7FI09
Hectar predicted targeting categoryother localisation
EggNOG OGs2CYS9@1,2S63T@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_006620.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size912
Cds size900
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig902.20427.1prot_F-serratus_M_contig902.20427.1Fucus serratus malepolypeptideF-serratus_M_contig902 54999..57834 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932633.0222704-UTR-F-serratus_M_contig902:54986..549981622932633.0222704-UTR-F-serratus_M_contig902:54986..54998Fucus serratus maleUTRF-serratus_M_contig902 54987..54998 +
1690964395.8994837-UTR-F-serratus_M_contig902:54986..549981690964395.8994837-UTR-F-serratus_M_contig902:54986..54998Fucus serratus maleUTRF-serratus_M_contig902 54987..54998 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932633.0397556-CDS-F-serratus_M_contig902:54998..550661622932633.0397556-CDS-F-serratus_M_contig902:54998..55066Fucus serratus maleCDSF-serratus_M_contig902 54999..55066 +
1690964395.9123983-CDS-F-serratus_M_contig902:54998..550661690964395.9123983-CDS-F-serratus_M_contig902:54998..55066Fucus serratus maleCDSF-serratus_M_contig902 54999..55066 +
1622932633.0550284-CDS-F-serratus_M_contig902:55842..559421622932633.0550284-CDS-F-serratus_M_contig902:55842..55942Fucus serratus maleCDSF-serratus_M_contig902 55843..55942 +
1690964395.9300358-CDS-F-serratus_M_contig902:55842..559421690964395.9300358-CDS-F-serratus_M_contig902:55842..55942Fucus serratus maleCDSF-serratus_M_contig902 55843..55942 +
1622932633.0712943-CDS-F-serratus_M_contig902:56389..567281622932633.0712943-CDS-F-serratus_M_contig902:56389..56728Fucus serratus maleCDSF-serratus_M_contig902 56390..56728 +
1690964395.9423542-CDS-F-serratus_M_contig902:56389..567281690964395.9423542-CDS-F-serratus_M_contig902:56389..56728Fucus serratus maleCDSF-serratus_M_contig902 56390..56728 +
1622932633.0853412-CDS-F-serratus_M_contig902:57182..573381622932633.0853412-CDS-F-serratus_M_contig902:57182..57338Fucus serratus maleCDSF-serratus_M_contig902 57183..57338 +
1690964395.9515934-CDS-F-serratus_M_contig902:57182..573381690964395.9515934-CDS-F-serratus_M_contig902:57182..57338Fucus serratus maleCDSF-serratus_M_contig902 57183..57338 +
1622932633.1003492-CDS-F-serratus_M_contig902:57597..578341622932633.1003492-CDS-F-serratus_M_contig902:57597..57834Fucus serratus maleCDSF-serratus_M_contig902 57598..57834 +
1690964395.9612691-CDS-F-serratus_M_contig902:57597..578341690964395.9612691-CDS-F-serratus_M_contig902:57597..57834Fucus serratus maleCDSF-serratus_M_contig902 57598..57834 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig902.20427.1

>prot_F-serratus_M_contig902.20427.1 ID=prot_F-serratus_M_contig902.20427.1|Name=mRNA_F-serratus_M_contig902.20427.1|organism=Fucus serratus male|type=polypeptide|length=300bp
MATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYEND
FTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREFDRMDKGSGTIDIRDVPC
VVEGALGCDVRPWIKDRMLKAFEKNIVGRVSWLDLQDGLRKVQEFAKAEA
SQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWY
KRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSK
RPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAELRMML*
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mRNA from alignment at F-serratus_M_contig902:54987..57834+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig902.20427.1 ID=mRNA_F-serratus_M_contig902.20427.1|Name=mRNA_F-serratus_M_contig902.20427.1|organism=Fucus serratus male|type=mRNA|length=2848bp|location=Sequence derived from alignment at F-serratus_M_contig902:54987..57834+ (Fucus serratus male)
GCTCTACCCACGATGGCGACATGCAGTCAAGAGGCGTCTTCGCATGTTCG GCGGGAGGACTACCGCATCCCGGACAGGCGGTGAACAATAACAACAACAA CAACACACGAAAAAGATTGGACGATGCCGTCGTGTCTATATCCATTATTT GCTGTACGCTTTCAATTTTCGATGTGAGGTGTAAGCATGTGAACATACAT GTGAGCGTGTCGCGCTTGTTTGTTATGGTATTATACAGTAAATTACTGGT AGTTGCTGTGCCGTACAACAGTGTGTTTTGAGTTTTCTTCCCATTTATTC TGGACGTCAAGTTCGTTGGACGTACCAGCCGGGGTCACACAGACAGGAGG AAGGTCACACAGGATTTCTCATCCATCTTCCTTCTGCGGTGCATGCCTTG ATTTTTCTCGCGAGAAGGGTTCATTCAGCCGTTCCTTTCCCTCGTCGACC GTGAAGTCAAATTTTGTGCACCAACGACTTAATAATCGTTCTCCACTTGT TGTTGGGTACCAGTATTTATTTATTTATTTGTTTTTATGCAGTGAGGAGA GGAAAATTCTCAGTTGTTATCGGGATTCGAGCTCACGTCCCCCAACAAGG TGTAATTAATACTGGTAGGAGGTAACGAGGTTACCAACTATTACTAGGTC GTCAGGCCCTGAAACGCTATGTACTATTATCAGTGGGACATAATAACAAC AGTTACTGTATTTCTTTATGAAACCCTTTTTTTCTTCTGGTCGATGTATT ACTTAATATTAGTATGCCCATTAACATCTCCAACGTAATGTAGCACGTTG TTTCCGTCCAATAAATGGTTGGCCTTTCCTCATTCCAATTCGCCAACTAT ACCCAGCGGTGTCTCCGTCAGTCACTCCTCCGAGAACCTTCTCGAAAGAT CCAAGCCGTTTCTACACGACTCGGTGTACGAGAACGACTTCACAAACTTC TCCAAGGTGTGTGTGTTGGGGGGGGGGGGGGAGGAGGGGGCTCAGAGAAG ATCGATCGAACGATCGACGACCATTTTTCCTTTGCATATTTTTGCCGCGC ACGATGTGTCACTACGCATGTTTCACTATCAACTAAAAGTGAACACCTCT GACGAGTGATTGCAAGGGCCTGGAAGCCTTTGTAATTCTTTCGTCGGCAG GCAGACCGGTGGAACAACTCGGGTGTTGGAGTGAATCATCCTTTTTTGGT GGCGGTCGCGGCCTCTGCGACACAATGGTGTTACCAAAATTATTTATACC AAGTTCTATTACAACAACAGCAAATCGCGTGGGAGTGAGACGGTAGTTTT ATTTTGACCCACAACACGAACATTACGTTATACAGTACTCGAAAACGCGT TACACCCAAAAACATCATATACTCATGGACGCACACATATACACGCAACA CAGGAGGTGGAACAGCTGGGAAAATATCTCGCGCCAGCAGGGAAGAAGGA CGGGGGTACGTGCGATATCTTTAAACGGGAGTTCGACAGAATGGACAAAG GCAGCGGTACGATCGACATCCGTGACGTGCCATGCGTCGTTGAAGGCGCG CTCGGGTGCGACGTTCGGCCGTGGATAAAGGATCGCATGCTCAAGGCGTT CGAGAAAAATATTGTCGGGAGGGTGTCGTGGTTGGATCTGCAAGACGGCC TGCGCAAGGTCCAAGAATTCGCGAAGGCGGAAGCGTCGCAAAAGGGACGG GCAGTGCCCGAATGGGTCGTCCCTAAACACAAGGTAACGAAAGTAAGCTT GAATCTGTGAGAGGGCAGTCATCGCCCTTGATTCCCATATTATATGTGCG CTACTCCTGCTCGTTGAGTTGGGCTGCCAAAGGGCATTCCATAAGGCATA ATGAGGCTGCTTCACTATAATGCTATAACACTATAAGTAACATTCATTCA CGTCTCCTTTGAAAGTTGTCGTCGAACATGGATAATACTTGCTGCCTGCC TAGCGCGGTGCATTTAGAACAACGACTTTCCACCTTTCGCAGGCAGAGTG GGTCTACCGCGCAGGAATTAGGCAATCGTGAACGAGCGACTGCACGACTC GCACCGCATCCTGCGTGCTTACCCCGCGTAGGATTCATGCGTACGACGAT CCCCTTGTCGGGAAATGTTGACGATTTGTCGAGCTTCTGGTGCGGCTTGC GCTAACCAATGAACACCCACGTTGCGTGAACCGTTACCGATGAAAGCCGG CGGTGACGCACGGCGAGGTACTCCGGAGCTGCTACCAGAAAGACATGGGA AAATATGGGGAGGTCCCTCGTAACCGTCGTATCTGGTACAAGCGTGGGAT GTCTTCAACCTCTCTGGATCTCTTCCAGGGCACCACCAAGGAGACCTACC ATGTTGGTTGCCTCTTGAGATTGCTCTCAACGTCGATATAGACATAAGCT AAGATGGCGCCGTCAGAGTATATTCTCATGGAGTAGAGCGCCACCCCCCC CCACATTCTCTCCTCTCAGCTAAGAAGGCGTGAGCTCTCTTGATGTTACA CTTTCTACAACACATTTTGCGCAAGCGTAACCCCCCCCCTCCCAATCCCT ATCGATGTTTTACAAACCCTCCACGACCGCCGAAACGCCCCCTTAcCCCC CCCACCGGAAGGTTCCGGGTTACGGCGGCTTCATGCCCGCCAGCAAGACC AACGCTCGTGCTCGCGAGCATGGCGACATGCTCAAACCCCGATCGAAGCG CCCGGACACGCTACTCTTCTATAGCCATAACACGCTTGGTTATACGGGGC ACGCTCCCGCGGCGATGTGCAACGACCGAGGTCCCGCGCGGTGTGGCTCA AACCCTCTCACCACGTCCGGAGCGGCGGAACTCCGCATGATGCTGTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig902:54987..57834+

>mRNA_F-serratus_M_contig902.20427.1 ID=mRNA_F-serratus_M_contig902.20427.1|Name=mRNA_F-serratus_M_contig902.20427.1|organism=Fucus serratus male|type=CDS|length=1800bp|location=Sequence derived from alignment at F-serratus_M_contig902:54987..57834+ (Fucus serratus male)
ATGGCGACATGCAGTCAAGAGGCGTCTTCGCATGTTCGGCGGGAGGACTA
CCGCATCCCGGACAGGCGATGGCGACATGCAGTCAAGAGGCGTCTTCGCA
TGTTCGGCGGGAGGACTACCGCATCCCGGACAGGCGCGGTGTCTCCGTCA
GTCACTCCTCCGAGAACCTTCTCGAAAGATCCAAGCCGTTTCTACACGAC
TCGGTGTACGAGAACGACTTCACAAACTTCTCCAAGCGGTGTCTCCGTCA
GTCACTCCTCCGAGAACCTTCTCGAAAGATCCAAGCCGTTTCTACACGAC
TCGGTGTACGAGAACGACTTCACAAACTTCTCCAAGGAGGTGGAACAGCT
GGGAAAATATCTCGCGCCAGCAGGGAAGAAGGACGGGGGTACGTGCGATA
TCTTTAAACGGGAGTTCGACAGAATGGACAAAGGCAGCGGTACGATCGAC
ATCCGTGACGTGCCATGCGTCGTTGAAGGCGCGCTCGGGTGCGACGTTCG
GCCGTGGATAAAGGATCGCATGCTCAAGGCGTTCGAGAAAAATATTGTCG
GGAGGGTGTCGTGGTTGGATCTGCAAGACGGCCTGCGCAAGGTCCAAGAA
TTCGCGAAGGCGGAAGCGTCGCAAAAGGGACGGGCAGTGCCCGAATGGGT
CGTCCCTAAACACAAGGTAACGAAAGAGGTGGAACAGCTGGGAAAATATC
TCGCGCCAGCAGGGAAGAAGGACGGGGGTACGTGCGATATCTTTAAACGG
GAGTTCGACAGAATGGACAAAGGCAGCGGTACGATCGACATCCGTGACGT
GCCATGCGTCGTTGAAGGCGCGCTCGGGTGCGACGTTCGGCCGTGGATAA
AGGATCGCATGCTCAAGGCGTTCGAGAAAAATATTGTCGGGAGGGTGTCG
TGGTTGGATCTGCAAGACGGCCTGCGCAAGGTCCAAGAATTCGCGAAGGC
GGAAGCGTCGCAAAAGGGACGGGCAGTGCCCGAATGGGTCGTCCCTAAAC
ACAAGGTAACGAAACCGGCGGTGACGCACGGCGAGGTACTCCGGAGCTGC
TACCAGAAAGACATGGGAAAATATGGGGAGGTCCCTCGTAACCGTCGTAT
CTGGTACAAGCGTGGGATGTCTTCAACCTCTCTGGATCTCTTCCAGGGCA
CCACCAAGGAGACCTACCATCCGGCGGTGACGCACGGCGAGGTACTCCGG
AGCTGCTACCAGAAAGACATGGGAAAATATGGGGAGGTCCCTCGTAACCG
TCGTATCTGGTACAAGCGTGGGATGTCTTCAACCTCTCTGGATCTCTTCC
AGGGCACCACCAAGGAGACCTACCATGTTCCGGGTTACGGCGGCTTCATG
CCCGCCAGCAAGACCAACGCTCGTGCTCGCGAGCATGGCGACATGCTCAA
ACCCCGATCGAAGCGCCCGGACACGCTACTCTTCTATAGCCATAACACGC
TTGGTTATACGGGGCACGCTCCCGCGGCGATGTGCAACGACCGAGGTCCC
GCGCGGTGTGGCTCAAACCCTCTCACCACGTCCGGAGCGGCGGAACTCCG
CATGATGCTGTGAGTTCCGGGTTACGGCGGCTTCATGCCCGCCAGCAAGA
CCAACGCTCGTGCTCGCGAGCATGGCGACATGCTCAAACCCCGATCGAAG
CGCCCGGACACGCTACTCTTCTATAGCCATAACACGCTTGGTTATACGGG
GCACGCTCCCGCGGCGATGTGCAACGACCGAGGTCCCGCGCGGTGTGGCT
CAAACCCTCTCACCACGTCCGGAGCGGCGGAACTCCGCATGATGCTGTGA
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