mRNA_F-serratus_M_contig902.20427.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: D7FI09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI09_ECTSI) HSP 1 Score: 396 bits (1018), Expect = 5.020e-136 Identity = 195/304 (64.14%), Postives = 229/304 (75.33%), Query Frame = 1
Query: 1 ALPTMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAP-AGKKDGGTCDIFKREFDRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEKNIVGRVSWLDLQDGLRKVQEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAELRMML 909
A PTM TCS EA S+V R DY++PDRRGVS H S +RSKPFLHDS+YE+DF NFS EV+ L P G++DG FKREFDR+D G+G + IRD+P +++G LG DVRPWI DR+LK FE G+V+WLDLQDGLRKV E A+++ S K R +PEW+V KV PAVTHG+V SCYQ DMGK GE+PR+RRIWYK GMSST+LDLF+GTTK TY VPGYGGF+PASK N RAREHGDM R R D LFY HN GYTGHAPAA CND GP+RCGS+PLTTSGAA L ++L
Sbjct: 14 APPTMTTCSSEAFSNVTRGDYQVPDRRGVSAKHFSAKPQDRSKPFLHDSLYEHDFRNFSDEVDGLDGGEGPRGGERDGENA--FKREFDRLDAGNGVVHIRDMPKLIQGVLGRDVRPWILDRILKMFEAKRDGKVTWLDLQDGLRKVAESARSDVSYKEREMPEWLVANRKVM-PAVTHGQVTESCYQMDMGKDGEIPRDRRIWYKTGMSSTTLDLFEGTTKATYQVPGYGGFIPASKMNLRAREHGDMKNSRRPRLDLRLFYRHNNPGYTGHAPAAACNDPGPSRCGSDPLTTSGAAALGIIL 314
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A835ZLH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLH4_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.310e-63 Identity = 123/324 (37.96%), Postives = 178/324 (54.94%), Query Frame = 1
Query: 10 TMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGK---------YLAPA-----------GKKDGGTCDIFKREFDRMDKG---SGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEKNIVGRVSWLDLQDGLRKVQEFAKAEASQKGR-AVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAELRMML 909
T+ T S E++SHV ++D+R P +RG + ++ + R+KPFLH ++++ + + ++E+E +LA A G +G S TID+ +P ++ R W+ DR+ KA E + G+V W L +V A + S R A+PEWV+ K P + HG+ + SCYQ D+G G P R++ +KRGM T+ DLF+GTTK+T+HVPGYGGF+PASK NARA +HGDM R+ + LF+ HN GYTGH A CNDRG CG++P TTSGAA L ++L
Sbjct: 63 TIKTVSAESTSHVTKQDFRPPGKRGCQAATAAA-AVARTKPFLHSTLHKESYRDINQEIEGFAAASVEAYRCAFLAAARDVQATSISLCGSSGXXXXXXXXXXXXXXSEGPMASPTIDVNQIPGLLVAVHSKPPR-WLADRLRKACEGDRSGQVRWDTFVAALARVLSTASKDGSLLVRTAMPEWVLISRKAH-PTIQHGKRITSCYQHDVG--GAAPAQRQLTFKRGMRGTTQDLFEGTTKDTFHVPGYGGFIPASKVNARAMQHGDMQDARAYSANLRLFHKHNMAGYTGHQGHAACNDRGELLCGTHPATTSGAAALGLLL 381
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A7R9UFG0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFG0_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.620e-53 Identity = 116/298 (38.93%), Postives = 157/298 (52.68%), Query Frame = 1
Query: 19 TCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYL-APAGKKDGGTCDIFKREFDRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEKNIVGRVSWLDLQDGLRKVQEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAELRMML 909
T ++ A++ VR Y PDRRGVS N K F+ +VY +DF + ++ +L +PA F++ F +G G +D +P V++ ALG IK + AF K+ G VSW D + L ++ E A E S G +VPEW+V K P V G L+SCYQ DMG E P+ + YK GM STS DL +GTTK+TYH+PGY GF+P S+ N+ A + + R+ R GYTGH P+ + NDRGP CG NPLTT+GA ML
Sbjct: 53 TITKAATTLVRPRLYSAPDRRGVSALFEESNKA-LPKRFMGSTVYRSDFIDLRADLVKLQDACRSPAA---------FQKAFFHYSRG-GELDTMLLPKVLDMALGERASEGIKSKFAAAFSKSRAGFVSWDDFRQKLGQILEAAVKEGSSGGVSVPEWLVLSSKPI-PKVIVGPALKSCYQCDMGLRNENPQTKPYTYKAGMYSTSYDLLRGTTKDTYHLPGYDGFIPESRRNSFAITQVNAKRTRASRERIAENVKPAVSGYTGHIPSNLINDRGPPLCGLNPLTTTGAGARHWML 338
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: G4ZGI1_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZGI1_PHYSP) HSP 1 Score: 143 bits (360), Expect = 1.880e-36 Identity = 102/309 (33.01%), Postives = 150/309 (48.54%), Query Frame = 1
Query: 10 TMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREFDRMDKGSG-TIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEK--NIVGRVSW------LDLQDGL--RKVQEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHG------DMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
T + ++ HV+ EDYR+PDRRGVSV+ + SKPF+ +S Y +DF F +E ++ P + + + KR G TI + V V++ ALG P + + ++ ++ ++SW +D D L R++ A ++ K + K + H S YQ D G YGE PR+R KRGM+ST++D+ GT++ T +PGY GF+P + NA A H D L P + R LF+S N GYTGH P N RG R GS+P TT+G
Sbjct: 56 THESMGMQSGQHVQPEDYRVPDRRGVSVNQPRPS----SKPFIANSTYLHDFPAFDEERRRV--LTVPLEEYERAFMAVAKRNNXXXXXQVGPTIQLAQVQEVLQLALGDGAVPRVVEVFHSFLDRRGSVRDKISWGLFRQAVDHVDDLFDRELNRATTASSTSKTWGSTSFA---DKQLNEYLVHSSTPASSYQMDFGTYGENPRDRPYMRKRGMASTTMDMNPGTSRVTNQIPGYAGFLPLTSHNAEALAHANGPEDIDSLHP-TPRVALRLFHSDNIPGYTGHKPVDCVNYRGECRAGSDPGTTTG 354
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A329T0D6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T0D6_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.750e-34 Identity = 92/287 (32.06%), Postives = 142/287 (49.48%), Query Frame = 1
Query: 46 VRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREFDRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEK--NIVGRVSWLDLQDGLRKVQEFAKAE---ASQKGRAVPEW--VVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
V+ EDYR+PDRRGVSV+ + SKPF+ ++ Y +DF F +E ++ P + + + K+ ++ +G+ TI + V V++ ALG P + D ++ N R+SW + V E ++ W + K + H S +QKD G YG+ P +R KRGM+ST+ DL T++ T +PGYGGF+P + +A A+ + + L P + R L++S N GYTGH N RG R GS+P TT+G
Sbjct: 68 VQPEDYRVPDRRGVSVNQKQPD----SKPFIANTTYLHDFPEFDEERRRV--LHLPLEEYERAFMAVAKKTNNQQQEGA-TIQLNQVQEVLKLALGDAAAPRVIDVFHSFLDRRGNTRDRISWALFSQAVDHVNSLFDLELHHGKTAASSIKTWGTMTFAEKQLNEYLVHSSTPASSHQKDFGTYGDNPLDRPYMRKRGMASTTADLNPATSRVTNQIPGYGGFLPLTSHSAEAQANDEELLP-TPRIALRLYHSENIPGYTGHKAVDCANYRGECRAGSDPGTTTG 346
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: D0NLJ8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLJ8_PHYIT) HSP 1 Score: 126 bits (317), Expect = 2.660e-30 Identity = 93/294 (31.63%), Postives = 136/294 (46.26%), Query Frame = 1
Query: 46 VRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQ-----LGKYLAPAGKKDGGTCDIFKREFDRMDKGSGT-IDIRDVPCVVEGALGCDVRPWIKDRMLKAFEK--NIVGRVSWLDLQDGLRKVQEFAKAEASQKGRAVPEWVVPKHKVT------KPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
V+ EDYR+PDRRGVSV+ N SKPF+ ++ Y +DF F + + LG Y F + ++ GT I + V V++ ALG P + D ++ + R+SW + V E G+ +P + +T + H S +QKD G YG+ P +R KRGM+ST+ DL T+ T +PGYGGF+P A+ + L+P + R + L++S N GYTGH P N RG R GS+ TT+G
Sbjct: 68 VQPEDYRVPDRRGVSVNQKQPN----SKPFIANTTYLHDFPPFGDDCRRALQVTLGDYET-----------AFVAVAKKNNQHDGTMIQLLQVSEVLKLALGDAAAPRVIDLFHSYLDRGGSSRDRISWALFCQAVDHVNSLFDHELHH-GKTLPSSIKTWGTMTFTEKQFNEYLVHSSTPASSHQKDFGTYGDNPLDRPYMRKRGMASTTADLNPAATRVTNQIPGYGGFLPLESHRTEAQTNDKDLRP-TPRIELRLYHSENIPGYTGHKPVDCANYRGECRAGSDLDTTTG 344
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: H3H106_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H106_PHYRM) HSP 1 Score: 126 bits (316), Expect = 4.290e-30 Identity = 95/308 (30.84%), Postives = 144/308 (46.75%), Query Frame = 1
Query: 10 TMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREFDRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEK--NIVGRVSWLDLQDGLRKV-----QEFAKAEASQKGRAVPEWVVPK---HKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARA------REHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
T + + ++ V+ EDYR+PDRRGVSV+ + KPF+ S Y++DF + +E ++ + + + K + D+ TI + V V++ LG P + + ++ ++ RVSW + + V +E + E + G +W K K + H S +Q D G YG PR+R KRGM+ST+ DL GT++ T +PGY GF+P + NA A E L P + R LF+S N GYTGH P N RG GS+P TT+G
Sbjct: 56 THESVAMQSGQVVQPEDYRVPDRRGVSVNQTRPEF----KPFISSSTYQHDFPAYDEERRRV--LHVSVEEYENAFMTVAKSVGQQQDE--ATIQLAQVQEVLKLVLGDAAVPRVVEMFHSYVDRRGSVRDRVSWRLFRQAIDHVNNLLDRELHRGETANSGS---KWWGSKTFAEKQLDEFLVHSSTPPSTHQIDFGTYGGNPRDRPYMRKRGMASTTTDLNPGTSRVTNQIPGYAGFLPLTSHNAEAVAQATGPEEIGRLHP-TPRVALRLFHSDNIPGYTGHKPVDCANYRGECLAGSDPGTTTG 351
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A1V9ZS18_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS18_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.930e-29 Identity = 94/297 (31.65%), Postives = 139/297 (46.80%), Query Frame = 1
Query: 7 PTMATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREFDRMDKGSGTID--IRD-VPCVVEGALGCDVRPWIKDRMLKAFEKNIVGRVSWLDLQDGLRKVQEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRR-IWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSG 885
PT + + V + DY RG SH N + K FL S+YE DF +F + GK L +++ +KR FD + + G RD V ++ G + D F+ G ++W ++ L ++ F + A+ K P W+ ++ + G + S +Q D G YG P R + +GM+ST+ DL GTTK T+H+P YGGFMP + N A GD +PRSK D L++ +N GYTGH P N RG A G++ TT+G
Sbjct: 50 PTFGSVYRADFGLVTKADYVS---RGPKESH---NDVVAGKKFLGQSLYETDFVHFQNQ----GKALLEMPREE------YKRAFDALAEAGGQEPRLSRDLVKELLTAVYGTPPSARMLDIYAHMFDPIADGYITWPVFEEALERLTLFV-SNATSKLHGKPSWM---EYLSLRRLLPGTMPSSSHQIDYGTYGSDPLARPYLGRTKGMASTTSDLADGTTKNTFHIPRYGGFMPEAPHNPTAVAQGDCPQPRSKGADLRLYHLNNIPGYTGHKPVDSKNVRGEAATGTDQRTTNG 326
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A8K1C9E0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9E0_PYTOL) HSP 1 Score: 123 bits (309), Expect = 4.900e-29 Identity = 92/326 (28.22%), Postives = 148/326 (45.40%), Query Frame = 1
Query: 25 SQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDFTNFSKEVEQLGKYLAPAGKKDGGTCDIFKREF-------------DRMDKGSGTIDIRDVPCVVEGALGCDVRPWIKDRMLKAFEKNIVG--------------RVSWLDLQDGLRKV-----QEFAKAEASQKGRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAELRMM 906
+ +++ V+ EDY++P R+G S + K + S Y++DF + +E +L+ ++ F+R F DR + S ++++R V VVE AL V P + + + V ++W + L + +E +A ++ VP PA T S +Q D G YG+ PR+R +RGM+ST+ DL GT ++TYH+PGY GF+P ++ N A HG+ R ++ + LF+S N GY GH P N RG R GS+P T++G A + M
Sbjct: 61 ASQSAQLVQPEDYKVPTRKGSSPTKGDH------KKMITPSTYQHDFPAYDEEKRA---FLSVDAER-------FERAFQAVVSSLEATQDADRSNNQSQSLELRHVSRVVELALRDTVVPNVSVAAIPRIAEQFVSYFDHQPPRSSPFRDNLTWDAFRGALDHISSVMERELGRAPTTRVSSKVPGMAKLDLAKLIPATTPA----SGHQLDFGMYGDNPRDRPYMRRRGMASTADDLQPGTARDTYHMPGYAGFLPMARHNPDAVAHGEGADLRGRKFEMRLFHSENIPGYAGHKPIDCVNYRGECRAGSDPKTSTGTAFIPHM 366
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Match: A0A7S2FHF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHF5_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.660e-28 Identity = 60/142 (42.25%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 472 GRAVPEWVVPKHKVTKPAVTHGEVLRSCYQKDMGKYGEVPRNRRIWYKRGMSSTSLDLFQGTTKETYHVPGYGGFMPASKTNARAREHGDMLKPRSKRPDTLLFYSHNTLGYTGHAPAAMCNDRGPARCGSNPLTTSGAAEL 897
G VPEWV +T+ V + +RS YQ DMG E P +R K GM+ T+ DL GTTK TYH+PG+ G +P ++ N R HGD K L++ HN GYTG P ND+G G+NP T+SGA+ L
Sbjct: 117 GATVPEWVTASKAITEDVVPR-QPVRSSYQTDMGMANEKPLDRPYISKTGMAGTTQDLCAGTTKATYHIPGFSGHIPTTQRNPRVVAHGDGQKVHDMPSHLRLYHRHNMPGYTGFRPTNAKNDKGERHSGANPATSSGASAL 257 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig902.20427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig902.20427.1 >prot_F-serratus_M_contig902.20427.1 ID=prot_F-serratus_M_contig902.20427.1|Name=mRNA_F-serratus_M_contig902.20427.1|organism=Fucus serratus male|type=polypeptide|length=300bp MATCSQEASSHVRREDYRIPDRRGVSVSHSSENLLERSKPFLHDSVYENDback to top mRNA from alignment at F-serratus_M_contig902:54987..57834+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig902.20427.1 ID=mRNA_F-serratus_M_contig902.20427.1|Name=mRNA_F-serratus_M_contig902.20427.1|organism=Fucus serratus male|type=mRNA|length=2848bp|location=Sequence derived from alignment at F-serratus_M_contig902:54987..57834+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig902:54987..57834+ >mRNA_F-serratus_M_contig902.20427.1 ID=mRNA_F-serratus_M_contig902.20427.1|Name=mRNA_F-serratus_M_contig902.20427.1|organism=Fucus serratus male|type=CDS|length=1800bp|location=Sequence derived from alignment at F-serratus_M_contig902:54987..57834+ (Fucus serratus male)back to top |