prot_F-serratus_M_contig901.20415.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig901.20415.1
Unique Name	prot_F-serratus_M_contig901.20415.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	117

Homology

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BLAST of mRNA_F-serratus_M_contig901.20415.1 vs. uniprot
Match: A0A6H5JUI7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUI7_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 1.030e-39
Identity = 79/117 (67.52%), Postives = 99/117 (84.62%), Query Frame = 0

Query:    1 MKTTSAAAALLTLFVGASAFNVAVPPAVRVAASRQSSTSLAA-YVPDGLSEKEWEQVKKKKADEKASRKEQVSSKSYESLDTFMKGMESGKRGHTFAKVDESLTKLPPAGARGVKQN 116
            MKT   A A++ LF GASAFNVAVP A RV ++R SST+++A YVPDGL+ ++WE +KK+KA + A+RK++V+SK +E +DTFMKGME+GKRGHTFAKVDESL KLPPAGARGVKQN
Sbjct:    1 MKT---AFAVVALFAGASAFNVAVP-ASRVTSTRASSTAVSAGYVPDGLTAQQWEDMKKEKAAKAAARKKEVASKKFEDIDTFMKGMEAGKRGHTFAKVDESLEKLPPAGARGVKQN 113

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig901.20415.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig901.20415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JUI7_9PHAE	1.030e-39	67.52	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..116
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.877
None	No IPR available	TMHMM	TMhelix		coord: 5..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig901	contig	F-serratus_M_contig901:169104..178641 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig901.20415.1	mRNA_F-serratus_M_contig901.20415.1	Fucus serratus male	mRNA	F-serratus_M_contig901 169054..179354 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig901.20415.1 ID=prot_F-serratus_M_contig901.20415.1|Name=mRNA_F-serratus_M_contig901.20415.1|organism=Fucus serratus male|type=polypeptide|length=117bp
MKTTSAAAALLTLFVGASAFNVAVPPAVRVAASRQSSTSLAAYVPDGLSE
KEWEQVKKKKADEKASRKEQVSSKSYESLDTFMKGMESGKRGHTFAKVDE
SLTKLPPAGARGVKQN*