mRNA_F-serratus_M_contig1276.2041.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 168 bits (425), Expect = 6.440e-48 Identity = 76/105 (72.38%), Postives = 88/105 (83.81%), Query Frame = 1
Query: 1 MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRRPSIVEAREILGE-FVAG 312
MSG+AGSKRFM+PEVC L YNEK DVYSF IV+W ICTL+KPF+GMSVADHYREV+ GGLRP LD RWP L +LL +CWH DPDRRPSI EAR++L + F+AG
Sbjct: 234 MSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVLQQIFLAG 338
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 151 bits (381), Expect = 9.480e-42 Identity = 67/103 (65.05%), Postives = 81/103 (78.64%), Query Frame = 1
Query: 1 MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRRPSIVEAREILGEFVA 309
MSG+AGSKRFMAPEVC L YNEK DVYSF +V+W IC L+KPF+GMS ADHY +VV GGLRP LD+RWP L +LL +CWH PD RP++V+AR+ L + A
Sbjct: 193 MSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLRQIFA 295
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE) HSP 1 Score: 129 bits (323), Expect = 2.540e-32 Identity = 57/109 (52.29%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 1 MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRRPSIVEAREILGEFVAGMSGCA 327
M+G GS+RFMAPEV + + YNEKAD+YS+GIV+W +C LQKPF+GMS +H R+V G+RP LD RWP L +LL SCWH + + RP +A E L + M A
Sbjct: 263 MTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLARIIEKMDATA 371
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.680e-25 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 1 MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRRP 267
M+G GS R+MAPEV +L YNEK DVY+FG+++W + ++ F GMSV D Y+ VV GG+RP LDS WP L L++ CWH D D+RP
Sbjct: 326 MTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRP 414
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: B8CCK4_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCK4_THAPS) HSP 1 Score: 103 bits (256), Expect = 2.100e-25 Identity = 47/98 (47.96%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 1 MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRRPSIVEAREIL 294
MSG GS R+MAPEV + YN+KADVYSFGI++W + +KP+ GM+ + Y VV GG RP L+ +WP L+ L+ SCW + +RP+ + EIL
Sbjct: 1 MSGETGSLRYMAPEVADCQPYNQKADVYSFGIILWELVAFKKPYDGMNRDEFYSRVVRGGERPLLNKKWPEDLSELMKSCWDAELVKRPNFSDIVEIL 98
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: A0A7S1ZHS7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHS7_TRICV) HSP 1 Score: 104 bits (260), Expect = 5.200e-25 Identity = 50/107 (46.73%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 1 MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRRPSIVEAREILGEFVAGMSG 321
MSG GS R+MAPEV + YN KADVYSFGI++W I + QKPF GM + Y VV GG RP + +WP L ++ CW DP RP+ E R L + +G
Sbjct: 43 MSGETGSLRYMAPEVADCRPYNHKADVYSFGIILWEIVSFQKPFDGMGRDEFYARVVHGGERPAIGKKWPKELVEIMTRCWDYDPKFRPTFHEVRTKLDALLEKETG 149
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI) HSP 1 Score: 108 bits (271), Expect = 9.390e-25 Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 1 MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRRPSIVEAREIL 294
M+G GS R+MAPEV +L YNEK DVY+FG+++W + ++ F GM V D Y VV G RP+LDS WP L L++ CWH D DRRP+ E L
Sbjct: 179 MTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERL 276
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.840e-24 Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 1 MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRRPSIVEAREIL 294
M+G GS R+MAPEV +L YNEK DVY+FG+++W + ++ F GM V D Y VV G RP+LDS WP L L++ CWH D DRRP+ E L
Sbjct: 392 MTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERL 489
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: A0A7S1ZVA0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZVA0_9STRA) HSP 1 Score: 102 bits (255), Expect = 9.540e-24 Identity = 49/112 (43.75%), Postives = 68/112 (60.71%), Query Frame = 1
Query: 1 MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRRPSIVEAREILGEFVAGMSGCAEQR 336
MSG GS R+MAPEV +L YN+KADVYSFGI++W + +KP+ GM+ + Y VV G RP ++ +WP L L+ CW D RPS E E L ++ G +E++
Sbjct: 104 MSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEGKERPPINKKWPEELVQLMQECWSFDARLRPSFHEIVERLDAMLSKEKGGSEKK 215
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Match: B5YNN3_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNN3_THAPS) HSP 1 Score: 99.8 bits (247), Expect = 1.420e-23 Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 4 SGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVADHYREVVVGGLRPHLDSRWPTVLNNLLNSCWHPDPDRR 264
SG+AG++R+MAPEV + Y ADVYSFGI++W + +L+ F G S HY+EVVV G RP + WP V NLL CW PDP R
Sbjct: 52 SGMAGTRRYMAPEVAQVIHYGLPADVYSFGILVWEMLSLKPAFFGYSREKHYKEVVVEGKRPKIPKSWPFVTRNLLERCWAPDPSER 138 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1276.2041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1276.2041.1 >prot_F-serratus_M_contig1276.2041.1 ID=prot_F-serratus_M_contig1276.2041.1|Name=mRNA_F-serratus_M_contig1276.2041.1|organism=Fucus serratus male|type=polypeptide|length=113bp MSGVAGSKRFMAPEVCNNLQYNEKADVYSFGIVMWLICTLQKPFSGMSVAback to top mRNA from alignment at F-serratus_M_contig1276:254064..254614+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1276.2041.1 ID=mRNA_F-serratus_M_contig1276.2041.1|Name=mRNA_F-serratus_M_contig1276.2041.1|organism=Fucus serratus male|type=mRNA|length=551bp|location=Sequence derived from alignment at F-serratus_M_contig1276:254064..254614+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1276:254064..254614+ >mRNA_F-serratus_M_contig1276.2041.1 ID=mRNA_F-serratus_M_contig1276.2041.1|Name=mRNA_F-serratus_M_contig1276.2041.1|organism=Fucus serratus male|type=CDS|length=678bp|location=Sequence derived from alignment at F-serratus_M_contig1276:254064..254614+ (Fucus serratus male)back to top |