mRNA_F-serratus_M_contig90.20391.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: A0A6H5KG41_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG41_9PHAE) HSP 1 Score: 328 bits (840), Expect = 1.150e-106 Identity = 155/195 (79.49%), Postives = 182/195 (93.33%), Query Frame = 3
Query: 6 INTLMGLRGLDFVLLGGDSAFFRSVVLMDSEYRKVVELTDNMVVAASGEQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALLGGWDKIASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYREGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDVSC 590
+NTLMG++G DFVLLGGDSAFFRSVV+MD+EYRKVVEL+DN++VA SG+QGDVE+FVEWLKRN RLM+LES+RP T+AHFARRN A+KLRKQG+GQAVTAL+GGW+++A +PELFWLDALGALQ +PFGAHGLASRFALSLLDNG+REGMSLDEAR LM+ CFRQL++RYLVSSVGFSMKVVD+ GCRDV+C
Sbjct: 1 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVATSGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALIGGWNEVACQPELFWLDALGALQDVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVAC 195
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: D7FKH0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH0_ECTSI) HSP 1 Score: 327 bits (838), Expect = 8.240e-96 Identity = 156/196 (79.59%), Postives = 183/196 (93.37%), Query Frame = 3
Query: 3 DINTLMGLRGLDFVLLGGDSAFFRSVVLMDSEYRKVVELTDNMVVAASGEQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALLGGWDKIASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYREGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDVSC 590
D+NTLMG++G DFVLLGGDSAFFRSVV+MD+EYRKVVEL+DN++VAASG+QGDVE+FVEWLKRN +LM+LES+RP T+AHFARRN A+KLRKQG+GQAVTALLGGW+++A +PELFWLDALGALQ + FGAHGLASRFALSLLDNG+REGMSLDEAR LM+ CFRQL++RYLVSSVGFSMKVVD+ GCRDV+C
Sbjct: 27 DMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVAWQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVAC 222
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: A0A1X2G7A8_9FUNG (Proteasome subunit beta n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G7A8_9FUNG) HSP 1 Score: 152 bits (385), Expect = 8.230e-40 Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 3
Query: 6 INTLMGLRGLDFVLLGGDSAFFRSVVLMDSEYRKVVELTDNMVVAASGEQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALLGGWDKIASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYREGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDV 584
+ L G+ G DF LL D+ RS+V+M K +L+ + V+ SGE GD F E+++RNIRL +++ S +A F RR A+ LR + AV +LGG+D+ KPELFW+D LGA+ S+PF A G + F SL+D YREGM ++EA+ L+Q C +L R++V+ F +K+VD+ G ++
Sbjct: 1 MECLFGITGKDFALLAADTISARSIVVMKGTEDKSRQLSPHSVLLYSGEPGDTVNFAEYIQRNIRLYSIQNGIELSPKAIATFTRREIADSLRSRHP-YAVNMILGGFDEKTGKPELFWIDYLGAMASLPFAAQGYGAYFCTSLMDRHYREGMDVEEAKKLLQQCINELKTRFIVNMPKFVVKLVDKDGVHEI 192
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: A0A835ZGL4_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGL4_9STRA) HSP 1 Score: 151 bits (382), Expect = 2.650e-39 Identity = 84/170 (49.41%), Postives = 110/170 (64.71%), Query Frame = 3
Query: 87 MDSEYRKVVELTDNMVVAASG-EQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALLGGWDKIASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYR-EGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDVSC 590
M+ Y+KVV+L D + AASG +QGDVEVFV+WL+R + L + S +V+ A ARR A+ LR++ V LLGGWDK+ +L+WLD +G+LQ IPFGAHG AS F +S+LD G+R + L +A LM+ C QL RYLV GF M VVD GCRD+ C
Sbjct: 1 MEGGYKKVVQLDDTLAAAASGPKQGDVEVFVDWLQRVLCLKRMTSG-GLTVSAAASLARRQLAQDLRRRPMD--VNMLLGGWDKVRGA-QLYWLDGMGSLQPIPFGAHGAASSFVISVLDKGHRGDETELRDAVRLMRDCVAQLSTRYLVRGGGFQMMVVDARGCRDIGC 166
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: UPI00026585B1 (proteasome subunit beta type-2 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026585B1) HSP 1 Score: 150 bits (379), Expect = 6.910e-39 Identity = 70/200 (35.00%), Postives = 129/200 (64.50%), Query Frame = 3
Query: 6 INTLMGLRGLDFVLLGGDSAFFRSVVLMDSEYRKVVELTDNMVVAASGEQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALLGGWDKIASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYREGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDVSCKALDE 605
+ +L+G++ DFVLL D++ RS++++ + +K+ +L+D++ +A +GE GD F +++ +NI+L ++ + S A+F R+N A+ LR + + + LLGG+D + +PEL+W+D LG+L +PF AHG F++ ++D YR M+++EA L++AC +++ KR+L + F V+D +G RD+S +DE
Sbjct: 1 MESLIGIKCRDFVLLAADASVARSIMVLKQDEQKIFKLSDSLAMAVAGESGDTVQFADYIAKNIQLFKMRNGYGLSPKAAANFTRKNLADSLRTRNAYRC-DLLLGGFDSHSKEPELYWVDYLGSLAKVPFAAHGYGGIFSMGVIDAAYRADMTVEEAHSLIRACVKEIRKRFLGNMPVFKCVVIDTNGIRDLSDVKVDE 199
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: A0A163JZA9_ABSGL (Proteasome subunit beta n=2 Tax=Absidia TaxID=4828 RepID=A0A163JZA9_ABSGL) HSP 1 Score: 146 bits (369), Expect = 1.700e-37 Identity = 75/193 (38.86%), Postives = 118/193 (61.14%), Query Frame = 3
Query: 6 INTLMGLRGLDFVLLGGDSAFFRSVVLMDSEYRKVVELTDNMVVAASGEQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALLGGWDKIASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYREGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDV 584
+ L G+ G DF LL D+ RS+V+M K +L+ N V+ SGE GD F E+++RNI+L + ++ S ++A+F RR A+ LR + +V +LGG+D KPELFW+D LGA+ S+P+ A G + F SL+D Y+ M++DEA+ L+Q C +L R++V+ F++K+V + G +DV
Sbjct: 1 MECLFGITGKDFTLLAADTVQARSIVVMKGTEDKSRQLSPNTVLLYSGEPGDTVNFAEYIQRNIKLYSIRNSIELSPKSIANFTRREIADSLRSKHP-YSVNMILGGYDVKEGKPELFWIDYLGAMASLPYAAQGYGAYFCTSLMDRYYKPDMNVDEAKALLQRCLDELKTRFIVNMPKFNVKLVSKDGVQDV 192
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: A0A0D2X0E4_CAPO3 (Proteasome subunit beta n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X0E4_CAPO3) HSP 1 Score: 146 bits (369), Expect = 1.860e-37 Identity = 75/200 (37.50%), Postives = 123/200 (61.50%), Query Frame = 3
Query: 6 INTLMGLRGLDFVLLGGDSAFFRSVVLMDSEYRKVVELTDNMVVAASGEQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALLGGWDKIASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYREGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDVSCKALDE 605
++ ++ + G DFV+ D+ RS+V+M S++ K+V+++ +++ +G GDV F E++++NI+L ++ + S AH+ R A LR G+ Q V LL G+D I + EL+++D L AL +PFGAHG AS F LSLLD Y ++LDEA LM+ C ++ KR +++ F+++VVD G RDV+ + E
Sbjct: 1 MDCIIAISGKDFVVAAADAMAARSIVVMKSDHEKMVQMSPHLLQVCNGPSGDVVQFSEFIQKNIKLYQMRNGFALSPHAAAHYTRDQLARALRSSGAYQ-VNLLLAGYDTINKQAELYFMDYLAALVKVPFGAHGYASHFVLSLLDRYYTPEVTLDEALRLMKMCIAEVQKRLVINLPKFTVRVVDAQGTRDVTLDDVQE 199
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: D2V0Q9_NAEGR (Proteasome subunit beta n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V0Q9_NAEGR) HSP 1 Score: 143 bits (361), Expect = 3.430e-36 Identity = 79/195 (40.51%), Postives = 125/195 (64.10%), Query Frame = 3
Query: 9 NTLMGLRGLDFVLLGGDSAFFRSVVLM-DSEYRKVVELTDNMVVAASGEQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALL-GGWDKI-ASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYREGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDV 584
+T++GL+G DF LL D+ S++LM D+E + N+++AA GEQGD FVE++ +N+ L L + SV AHF R+ A+ LR SG T ++ GG D I +KPEL+++D L ++Q + +GAHG S F LS+LD Y++GM+L+EA +++ C ++ KR L+++ F +KVVD++G R+V
Sbjct: 3 DTVIGLKGKDFTLLAADTTASFSIILMKDTEDKITAVPNQNILIAAQGEQGDRVQFVEFITKNLNLYRLRNDTNLSVKASAHFVRQELAKALR---SGPYQTNIMVGGVDDIEGAKPELYYIDYLSSMQEVKYGAHGYGSYFTLSILDKHYKDGMNLNEALIVLRMCVAEIQKRLLLNTPSFIVKVVDKYGSREV 194
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: A0A1X2HG76_SYNRA (Proteasome subunit beta n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HG76_SYNRA) HSP 1 Score: 142 bits (359), Expect = 4.280e-36 Identity = 73/193 (37.82%), Postives = 116/193 (60.10%), Query Frame = 3
Query: 6 INTLMGLRGLDFVLLGGDSAFFRSVVLMDSEYRKVVELTDNMVVAASGEQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALLGGWDKIASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYREGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDV 584
+ L G+ G DF LL D+ RS+V+M K L ++ V+ +GE GD F E+++RNI+L ++ + S A+F RR A+ LR + AV LLGG+D + P+L+W+D LGA+ S+P+GA G + F SL+D + M L+EA++LM+ C ++L R++V+ F +KVVD+ G +D+
Sbjct: 1 MECLFGITGKDFTLLAADTTSARSIVVMKGNENKSRILNEHTVMLFTGEPGDTVNFAEYIQRNIQLYKIRNGMDLSPKAAANFTRRELADSLRSRHP-YAVNMLLGGFDVKTNTPQLYWVDYLGAMASLPYGAQGYGAYFCTSLMDRYHYADMDLEEAKELMRRCIQELKTRFIVNLPRFMVKVVDKDGIKDI 192
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Match: A0A0C2XHJ5_AMAMK (Proteasome subunit beta n=2 Tax=Amanita TaxID=41955 RepID=A0A0C2XHJ5_AMAMK) HSP 1 Score: 142 bits (358), Expect = 5.950e-36 Identity = 75/187 (40.11%), Postives = 115/187 (61.50%), Query Frame = 3
Query: 24 LRGLDFVLLGGDSAFFRSVVLMDSEYRKVVELTDNMVVAASGEQGDVEVFVEWLKRNIRLMELESARPCSVATVAHFARRNTAEKLRKQGSGQAVTALLGGWDKIASKPELFWLDALGALQSIPFGAHGLASRFALSLLDNGYREGMSLDEARDLMQACFRQLDKRYLVSSVGFSMKVVDRHGCRDV 584
L G D+V++ D+ RS+V M ++ K+ L+ ++++A SGE GD F E+++RNIRL ++ + S + A + RR+ AE LR + S AV L+GG+D +P L+W+D LG + IPFGAHG S FALSLLD + SL+E ++ C ++ KR +VS + +KVVD+ G R+V
Sbjct: 7 LTGKDYVIVAADTTAARSIVKMKTDQDKIKILSPHLLMAYSGEPGDTLQFAEYVERNIRLYQIRNLYALSPSAAASWIRRSLAESLRSRNS-YAVNLLVGGFDTTTQEPHLYWIDYLGTMTEIPFGAHGYGSYFALSLLDRYHDPDASLEEGLATLKRCIDEVSKRLVVSPDRYKVKVVDKDGVREV 192 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig90.20391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig90.20391.1 >prot_F-serratus_M_contig90.20391.1 ID=prot_F-serratus_M_contig90.20391.1|Name=mRNA_F-serratus_M_contig90.20391.1|organism=Fucus serratus male|type=polypeptide|length=236bp MGLRGLDFVLLGGDSAFFRSVVLMDSEYRKVVELTDNMVVAASGEQGDVEback to top mRNA from alignment at F-serratus_M_contig90:215238..218449+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig90.20391.1 ID=mRNA_F-serratus_M_contig90.20391.1|Name=mRNA_F-serratus_M_contig90.20391.1|organism=Fucus serratus male|type=mRNA|length=3212bp|location=Sequence derived from alignment at F-serratus_M_contig90:215238..218449+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig90:215238..218449+ >mRNA_F-serratus_M_contig90.20391.1 ID=mRNA_F-serratus_M_contig90.20391.1|Name=mRNA_F-serratus_M_contig90.20391.1|organism=Fucus serratus male|type=CDS|length=1416bp|location=Sequence derived from alignment at F-serratus_M_contig90:215238..218449+ (Fucus serratus male)back to top |