mRNA_F-serratus_M_contig895.20314.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig895.20314.1 vs. uniprot
Match: D7G3D9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D9_ECTSI) HSP 1 Score: 495 bits (1274), Expect = 7.210e-162 Identity = 239/378 (63.23%), Postives = 302/378 (79.89%), Query Frame = 1
Query: 316 MQTEVRVADYKTVFGGRIQSCFTGKDAVEWCMRKEFCSNEMDAVHLLNRMLRRGLMHHCNLNKLMENNATAFYRFPQEHFKMLVDQTGAGRSLRRRLRPRAKTLQGAAALQERWYADVPTLPAEKVHNLGQVLEMLNCRDIQRGLRRHLDVFPGNELVQLLIESGVAKDETDALAVGNGFLRAGLFYHIRLKAPLRNDDTLYRLATHQYDLLVNRDQVMGMSYNGRPGGI----SADDGKGGSVGVGVHEVKVDGGLDMQGKTALELATSSRYWTSFRASKLYELTLNVVEAFIDMSDDWDSHVDQMYPTYCECYLTRDKEATMQSTHSSTRTLHPVWNCPVAFVDVDYLDMVHIDLKAHTQLGHDITVGSLEFTAHE 1437
M EV V ++KT+ GG I++CF+GK AV+WC++K+ CS+E+DA+HLLNRML RGL+HHC L+KL+E + TA+YRFPQ+HFK+LVDQTGA +S+RRRLRP +KTL G AAL+ERWYADVPTLP++KV G+VL+ L RD+ RGLRR+ VF G E V+LLI++G AKD TDALA+GN FLRAGLF+ + L+APLRND+TLYRLA +Q+ +LV+RDQV G SY+G + DD + G+V + + L+ +G++ALELAT+SRYWTS+RASKLY + L V+E FIDMS+DWD HVD+M+PTYCECYLTRDKEAT ST S +TLHPVWNCPVAFVDVDYLD+V IDLKA T LG D T+GS+EF AHE
Sbjct: 1 MHQEVPVKNFKTMLGGTIKACFSGKSAVDWCLQKDLCSDEIDAIHLLNRMLERGLLHHCRLSKLVEPSDTAYYRFPQDHFKVLVDQTGAQQSVRRRLRPNSKTLHGEAALKERWYADVPTLPSDKVRKHGRVLQRLQPRDVTRGLRRYPMVFQGKEAVELLIDTGKAKDTTDALAIGNAFLRAGLFHQVNLRAPLRNDETLYRLAGNQFAILVSRDQVWGSSYHGGTSNARYSSALDDSRVGTV---ISGSDLSDALETKGRSALELATASRYWTSYRASKLYVVNLTVIEGFIDMSEDWDHHVDEMFPTYCECYLTRDKEATTHSTIRSHKTLHPVWNCPVAFVDVDYLDVVRIDLKAQTHLGQDTTIGSIEFDAHE 375
BLAST of mRNA_F-serratus_M_contig895.20314.1 vs. uniprot
Match: D7G3K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K7_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 3.090e-11 Identity = 64/251 (25.50%), Postives = 108/251 (43.03%), Query Frame = 1
Query: 1096 LELATSSRYWTSFRASKLYELTLNVVEAFIDMSDDWDSHVDQMYP---------------TYCECYLTRDKEATMQSTHSSTRTLHPVWNCPVAFVDVDYLDMVHIDLKAHTQLGHDITVGSLEFTAHEVMGA----GNQSVIVEFDPGSRRYAECAAAIIKVQFDPAVAGPGEGTEGSKHHRLLIQGARKQEDLANAADVSRSRGSKSHNRRSKTRGSVRRTSFGASAEDMDPAFISVEGCLGCVLLDDD 1791
++LA +SRYW S+R SK + LT+ + EA + ++ ++ P T L +D T + +T +PVW+ V D++Y ++V ++++ ++G + + S+EF H+V+G G +E D RY ++ +FDP VA G L +G + AD G K+ + G E +P +I+VEG C+LLDDD
Sbjct: 1 MDLAHTSRYWKSYRESKTFTLTIYIYEAHLGVNSSISNNSSTGGPXXXXXXXXXGGGPWDTKIVVSLPKDPMGERHETGRAGKTSNPVWDQAVVLRDIEYSELVRVEMRRPRKIGENPVLASVEFEVHDVIGLSLREGASVFQLECDRSRARYG---IILLAFRFDPPVAADVLGALDGVGLASLPRG------VTTPADQGHDEGEKAPAWGAPEAGQQAER----EVEVAEPVYINVEGHFACLLLDDD 238 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig895.20314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig895.20314.1 >prot_F-serratus_M_contig895.20314.1 ID=prot_F-serratus_M_contig895.20314.1|Name=mRNA_F-serratus_M_contig895.20314.1|organism=Fucus serratus male|type=polypeptide|length=785bp MKIDGVSVDPSPADDPYATEHVALDIDIDLDELAHKMQTEVRVADYKTVFback to top mRNA from alignment at F-serratus_M_contig895:204738..238019+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig895.20314.1 ID=mRNA_F-serratus_M_contig895.20314.1|Name=mRNA_F-serratus_M_contig895.20314.1|organism=Fucus serratus male|type=mRNA|length=33282bp|location=Sequence derived from alignment at F-serratus_M_contig895:204738..238019+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig895:204738..238019+ >mRNA_F-serratus_M_contig895.20314.1 ID=mRNA_F-serratus_M_contig895.20314.1|Name=mRNA_F-serratus_M_contig895.20314.1|organism=Fucus serratus male|type=CDS|length=4710bp|location=Sequence derived from alignment at F-serratus_M_contig895:204738..238019+ (Fucus serratus male)back to top |