mRNA_F-serratus_M_contig895.20313.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: D7G3E1_ECTSI (Similar to camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E1_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 3.480e-133 Identity = 280/576 (48.61%), Postives = 354/576 (61.46%), Query Frame = 1
Query: 22 VFLKGCTVPLERYRECLMKNLKDWSGRGLHRVKLSNVKIHQLSQMNITRFDHQKMITARIRELPDIPSMPPKYDFGRMNTCDELEEAGPVKIDSPGRGTLACTSPDQGGSGSHGGQSREESLGAGERSVSTWSIVFHRRPS---RTRDRGD---------RRRSTQIGDKGTRERRRRSLAGERNWEAINKARHRANGSAKQKKLDDLRHRKSQVGAPPGEIERNASGGTAKSLRGASNNSGSVVSNLGTSSTETRA----RKASHGISSFDPTKQAKIREAQTKRQRAIEYGNSALKATTREVALKDLRKQILADFMDTLGCERATLMLIDTPAQEIFFFDGPTRISFPLKAGIAGHCASSGMSMVVNDPYSHPFFNPEARIDRATDFQTRNILCEPIKKSRRGGNVVAVLEMLNKKNGQNFTDQDSAVMEMCAVKVANALDTTFAALISAEQEWSQAAGRRPSLGDARPLKNTAKAAAAAATGQATVDVPYSKPLDAWTTQAGLEAG-------RGGEGGLGRKHSSAPSGAEDKGACERRDSFSGPEISNRRGSGTSAEDAKKLERRSSYGKE 1680
+FL+GC PLE+YRECLMKNLKDW GRGL R KLS VKIHQL QMNITRFDHQK+I RIR L DIPSM +Y G+ N E+E A V +P + GS S+ G S + SVS+ S+ + S + D G+ RRRST+ G G + RR SLA ++ WEAINK+R A+G KQK+LD +R R S VG P E++ A+ AS+N S+V + +S T + R+ S + D +QA+I EA+ KRQRA+EYGNSALKATTRE LKDL+KQILADF+ T+GC+RATLM +DTPAQE+FFFDG RI+FPL+ GIAGH A++GM +VVNDPY++ FN + +D+ + F TRNILCEPIK SR+GGNVVAVL+M+NKK+G++F++ D+ VMEMCAVKVA ALDT+FAAL+SAE EW++AAGRR RG GG R+ S+ SG D G E P+ISNRRGSGTS D +KL+RR+ YGKE
Sbjct: 1 MFLRGCREPLEQYRECLMKNLKDWHGRGLVRQKLSAVKIHQLGQMNITRFDHQKLIMDRIRHLSDIPSMA-RYSVGKANVA-EVEAAVHV-------------APRRKGSSSNTGSSNNVNRVLSGDSVSSGSLAENASQSDASMSEDTGEGGKKSKGHHRRRSTRHG-LGVKGGRRGSLAIDKTWEAINKSRAEADGGVKQKQLDTIRRRISNVGTQPPELKPFNPAEFAREQNQASSNDSSLVGSKESSDTNGASKGAGRRESLSPNVHDKARQARIDEAKAKRQRALEYGNSALKATTREGQLKDLKKQILADFVSTIGCDRATLMFVDTPAQELFFFDGNMRIAFPLRKGIAGHVAATGMGLVVNDPYNNERFNRQ--VDKDSGFVTRNILCEPIK-SRKGGNVVAVLQMVNKKDGEDFSEHDAGVMEMCAVKVALALDTSFAALVSAENEWAKAAGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGSLGG--RRGSATLSGLGDDGLQEV------PQISNRRGSGTSKADVEKLKRRTEYGKE 549
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: A0A835ZCA7_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA7_9STRA) HSP 1 Score: 248 bits (634), Expect = 6.860e-71 Identity = 185/467 (39.61%), Postives = 251/467 (53.75%), Query Frame = 1
Query: 4 DIVDVDVFLKGCTVPLERYRECLMKNLKDWSGRGLHRVKLSNVKIHQLSQMNITRFDHQKMITARIRELPDIPSMPPKYDFGRMNTCDELEEAGPVKIDSPGRGTLACTSPDQGGSGSHGGQSREESLGA-GERSVSTWSIVFHRRPSRTRDRGDRRRSTQIGDKGTRERRRRSLAGERNWEAINKARHRANGSAKQKKLDDLRHRKS---QVGAPPGEIERNASGGTAKSL-RGASNNSGSVVSNLGTSSTETRARK-ASHGISSFDPTKQAKIREAQTKRQRAIEYGNSALKATTREVALKDLRKQILADFMDTLGCERATLMLIDTPAQEIFFFDGPTRISFPLKAGIAGHCASSGMSMVVNDPYSHPFFNPEARIDRATDFQTRNILCEPIKKSRRGGNVVAVLEMLNKKNGQNFTDQDSAVMEMCAVKVANALDTTFAALISAEQEWSQAAGRRPSLGDARP 1386
D++DV FLK LE+YREC M NL GRGL R KL+ V++H L MNITR DHQK+I AR++EL IP++ DE+ V +A + G SR GA G R + R S G RRS KG+ S+ + W AI AR + + K K+LD +R R+S ++ R A S R A+ SV S+ E+RA++ A H +S + + A RQRA EYGN ALK+ T E LK+L++ +L DT+ CE+AT+M +D + +FF+DG T I FP+ G+AG+CA++G ++VNDPYS P FN ID+ T F TRNILCEPI+ SR GG ++AVL+M+NK+ G+ FT+QDS VMEM + V+ AL+ F ALIS + EW+ RR S G A P
Sbjct: 4 DLIDVRTFLKP--TGLEQYRECFMTNLWGGDGRGLSRRKLAQVQMHHLPDMNITRHDHQKIIMARLKELDRIPAV-----------GDEMTPESDVPATGYHSSHVALLARANSSVTPQTGSSRAPGKGADGARQT-----LLRRSSSNDSANGAGRRSR----KGS------SIDATQTWAAIQTARQQLDKDNKTKRLDQMRSRQSTLIRIDLTKAASRRGTFINPATSTPRNATGTEPSV------STAESRAQQGAGHRLSVRAIS--MPVDAAAEARQRAQEYGNKALKSNTLENQLKELKRTLLQQLCDTMSCEKATIMFLDQHNEVLFFYDGDTCIRFPMSKGVAGYCATTGERLLVNDPYSDPRFNQA--IDKQTGFVTRNILCEPIR-SRMGGALLAVLQMINKRGGEGFTEQDSEVMEMAVLNVSEALENRFRALISHQSEWAGTKARRNSAGPAAP 431
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: A0A6H5JRH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH4_9PHAE) HSP 1 Score: 143 bits (361), Expect = 2.710e-36 Identity = 75/132 (56.82%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 787 DPTKQAKIREAQTKRQRAIEYGNSALKATTREVALKDLRKQ-------------------------ILADFMDTLGCERATLMLIDTPAQEIFFFDGPTRISFPLKAGIAGHCASSGMSMVVNDPYSHPFFN 1107
D +QA+I EA+ KRQRA+EYGNSALKATTRE LKDL+KQ ILADF+ T+GC+RATLM +DTPAQE+FFFDG RI+FPL+ GIAGH A++GM +VVNDPY++ FN
Sbjct: 19 DKARQARIDEAKAKRQRALEYGNSALKATTREGQLKDLKKQVGQQQTLHGDSICCRSWNARSCVFVILADFVSTIGCDRATLMFVDTPAQELFFFDGNMRIAFPLRKGIAGHVAATGMGLVVNDPYNNEHFN 150
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: A0A7S4D805_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D805_HETAK) HSP 1 Score: 131 bits (330), Expect = 4.350e-31 Identity = 73/183 (39.89%), Postives = 111/183 (60.66%), Query Frame = 1
Query: 799 QAKIREAQTKRQRAIEYGNSALKATTREVALKDLRKQILADFMDTLGCERATLMLIDTPAQEIFFFD-GPTRISFPLKAGIAGHCASSGMSMVVNDPYSHPFFNPEARIDRATDFQTRNILCEPIKKSRRGGNVVAVLEMLNKKNGQNFTDQDSAVMEMCAVKVANALDTTFAALISAEQEWS 1344
Q ++ EAQ RQ+A +YG++AL+ + L +R+++L F + CERA+LM +D +EIFFFD + FP AGIAGH S+G + + D YS P FN E +D+ T F TRNILC PI+ G +VAV++MLNK++ +F+ D ++E C VA L + L+ A ++++
Sbjct: 24 QGELTEAQKARQKARDYGDAALRQERVKKDLLAIRQRVLGRFQQIINCERASLMFVDDRRKEIFFFDESDHQRRFPSSAGIAGHVVSTGERLNIPDAYSDPRFNRE--MDKLTGFHTRNILCAPIRTYT--GQIVAVVQMLNKRDEDHFSHNDEGIIEACGTDVAEVLAPKYRDLLEAMEDFA 202
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: A0A7S2LDR6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LDR6_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.690e-26 Identity = 65/159 (40.88%), Postives = 94/159 (59.12%), Query Frame = 1
Query: 829 RQRAIEYGNSALKATTREVALKDLRKQILADFMDTLGCERATLMLIDTPAQEIFFFDGP-TRISFPLKAGIAGHCASSGMSMVVNDPYSHPFFNPEARIDRATDFQTRNILCEPIKKSRRGGNVVAVLEMLNKKNGQNFTDQDSAVMEMCAVKVANALD 1302
R+ A+ YG SA + E+ L L K+ + F T+ CER +++ D E+FFFD R S L+ GIAG+ A G V+D Y FN +D T F+T+++LC PIK +R G ++AV++MLNKK G++FTD D +M C+ KVA AL+
Sbjct: 41 RELALHYGESAQRTACAELNLNKLGKRAMNSFKKTIACERCSILFCDRDKNELFFFDDKLVRFSLSLELGIAGYVAKHGEIANVSDVYVDSRFNKN--LDEQTGFRTKSLLCAPIK-NRSGDCIIAVIQMLNKKGGESFTDHDEDLMRNCSFKVAEALE 196
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: A0A812VR99_SYMMI (PDE10A protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VR99_SYMMI) HSP 1 Score: 96.3 bits (238), Expect = 1.140e-18 Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 1
Query: 913 LADFMDTLGCERATLMLIDTPAQEIFFFDGPTRISFPLKAGIAGHCASSGMSMVVNDPYSHPFFNPEARIDRATDFQTRNILCEPIKKSRRGGNVVAVLEMLNKKNGQNFTDQDSAVMEMCAVKVANALDTTFAALISAEQEWSQAA-------GRRPSL 1371
L + DT+GCE ++ + ++E+ P ++GI G C +G ++ ++D Y FN +DR T +TRNILC P++ +R GG VVAVL ++NKK G NF D D ++ A + + F L+S S A GRRPS
Sbjct: 9 LTEIRDTIGCELVHILFFNDQSRELMMCADEKWFRIPCESGIEGWCIVTGETINLDDAYRDHRFNEN--MDRVTGVKTRNILCSPLRANRGGGRVVAVLNLINKKGGSNFDDNDEIIVHQMANNFIDEMAAEFGDLLSLNDSISSFATPILPSDGRRPSF 166
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: UPI000B5A1F21 (adenylate/guanylate cyclase domain-containing protein n=1 Tax=Leptolyngbya ohadii TaxID=1962290 RepID=UPI000B5A1F21) HSP 1 Score: 97.1 bits (240), Expect = 3.990e-17 Identity = 66/182 (36.26%), Postives = 100/182 (54.95%), Query Frame = 1
Query: 889 LKDLRKQILADFMDTLG----CERATLMLIDTPAQEIFF-----FDG-PTRISFPLKAGIAGHCASSGMSMVVNDPYSHPFFNPEARIDRATDFQTRNILCEPIKKSRRGGNVVAVLEMLNKKNGQNFTDQDSAVMEMCAVKVANALDTTFAALISAEQEWSQAAGRRP--SLGDARPLKNT 1398
L+ + +QIL F +G +R T+ L+D ++++ DG PT I PL+ GIAGH AS+G + ++D Y HP FNPE +DR T ++TRNILC P+ S R VVAV+++LNK+ G F +D + A + L++ + I+A + AA + SLG + L T
Sbjct: 61 LETMLEQILQAFTLKIGQLLRADRTTIFLVDLEKEQLWSKVAQGSDGKPTEIRVPLRVGIAGHVASTGECLNIHDAYEHPLFNPE--VDRQTQYRTRNILCMPVFSSDR--QVVAVVQLLNKQQGNFFDAEDERLFREFAESMGIILESCNSFYIAARNQRGVAALLKATSSLGQSLDLDKT 238
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: A0A7S3MBA7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBA7_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.360e-16 Identity = 57/183 (31.15%), Postives = 99/183 (54.10%), Query Frame = 1
Query: 814 EAQTKRQRAIEYGNSALKATTREVALKDLRKQILADFMDTLGCERATLMLIDTPAQEIFFFDGPTR-ISFPLKAGIAGHCASSGMSMVVNDPYSHPFFNPEARIDRATDFQTRNILCEPIKKSRRGGNVVAVLEMLNKK----NGQNFTD-QDSAVMEMCAVKVANALDTTFAALISAEQEWS 1344
+A +R RA+ YGN AL+ L L+ ++L F +T+ CE A+L + QE+ + ++ P GI G+C +G ++ + + Y FN +D T F+TR+ILC+P++ R GG ++ V++MLNKK +G+ D D ++ + +VA+ L FA L + +++S
Sbjct: 102 QAGMERARAVMYGNMALEYDMMLTNLNLLQTEVLNQFKETINCEVASLFFANHRTQELLLCNSDSKWYRVPFGVGICGYCMETGENVNIPNAYEDHRFNKN--MDLKTGFKTRSILCQPVRGMRGGGQIIGVIQMLNKKGPGTDGEGVFDAHDEELLTNFSSRVADMLSVKFADLNALAEKFS 282
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: A0A6H5JRT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT3_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 7.300e-16 Identity = 66/147 (44.90%), Postives = 82/147 (55.78%), Query Frame = 1
Query: 1264 MEMCAVKVANALDTTFAALISAEQEWSQAAGRRPSLG-----DARPLKNTAKAAAAAATGQATVDVPYSKPLDAWTTQAGLEAGRGGEGGLGRKHSSAP-SGAEDKGACERRDSFSGPEISNRRGSGTSAEDAKKLERRSSYGKEVI 1686
MEMCAVKVA ALDT+FAAL++AE EW++AAGRR S G D+ P+ A+A + A AG G G LG + SA SG D G E P+ISNRRGSGTS D +KL+RR+ YGKE++
Sbjct: 1 MEMCAVKVALALDTSFAALVAAENEWAKAAGRRRSSGSGSIDDSEPVLTAAEA------XXXXXXXXXXXXXXXXSDGADATAGGGRRGSLGGRRGSATLSGLGDGGLQEVGARV--PQISNRRGSGTSKADVEKLKRRTEYGKELV 139
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Match: A0A367ZN43_9BACT (Adenylate cyclase n=1 Tax=Candidatus Ozemobacter sibiricus TaxID=2268124 RepID=A0A367ZN43_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 8.110e-16 Identity = 62/160 (38.75%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 841 IEYGNSALKATTREV---ALKDLRKQILADFMDTLGCERATLMLIDTPAQEIF--FFDG--PTRISFPLKAGIAGHCASSGMSMVVNDPYSHPFFNPEARIDRATDFQTRNILCEPIKKSRRGGNVVAVLEMLNKKNGQNFTDQDSAVMEMCAVKVANAL 1299
+E + L +TR V +L +L ++ +T+ ER TL L D+ E+F G + I F + GIAG SG ++++D Y+ P FNPE ID+ T F+TRNI+C PIK RGG V+ VL++LNKK G FT +D +++E+ A AL
Sbjct: 44 LEKVAAILDVSTRMVDTCSLNNLLALMIQITSETVKAERGTLFLYDSETDELFSRILQGGEASEIRFSARQGIAGAVFHSGQPVIIDDAYADPRFNPE--IDQKTGFRTRNIVCAPIKT--RGGQVIGVLQLLNKKTGP-FTPEDLSLLEVITSHAAAAL 198 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig895.20313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig895.20313.1 >prot_F-serratus_M_contig895.20313.1 ID=prot_F-serratus_M_contig895.20313.1|Name=mRNA_F-serratus_M_contig895.20313.1|organism=Fucus serratus male|type=polypeptide|length=564bp MKNLKDWSGRGLHRVKLSNVKIHQLSQMNITRFDHQKMITARIRELPDIPback to top mRNA from alignment at F-serratus_M_contig895:196115..204554- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig895.20313.1 ID=mRNA_F-serratus_M_contig895.20313.1|Name=mRNA_F-serratus_M_contig895.20313.1|organism=Fucus serratus male|type=mRNA|length=8440bp|location=Sequence derived from alignment at F-serratus_M_contig895:196115..204554- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig895:196115..204554- >mRNA_F-serratus_M_contig895.20313.1 ID=mRNA_F-serratus_M_contig895.20313.1|Name=mRNA_F-serratus_M_contig895.20313.1|organism=Fucus serratus male|type=CDS|length=3384bp|location=Sequence derived from alignment at F-serratus_M_contig895:196115..204554- (Fucus serratus male)back to top |