mRNA_F-serratus_M_contig101.203.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A6H5KGJ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ6_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.110e-27 Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 3 Query: 111 GEEEEKSSQDDGHEVKRQRRVFQRPDYTQSPWAVMLRHEGLQDSTSRESKVFRRRFRIPHVFFLELVDLVKARKWFPTKEVDISGRMCIPVELKVL 398 G+E E G VKR RRV RPDY S W ML GL++ SRE+K+FRRRFRIP+ FF EL++LVK +KWFP ++ D++GRMCIPVELKV+ Sbjct: 38 GDELEDEGLGGGSPVKRTRRVLPRPDYRASFWWRMLGETGLKEPVSREAKLFRRRFRIPYQFFTELMELVKKKKWFPMRKKDVAGRMCIPVELKVM 133
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A6H5JRQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ7_9PHAE) HSP 1 Score: 105 bits (262), Expect = 3.840e-25 Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 3 Query: 156 KRQRRVFQRPDYTQSPWAVML-RHEGLQDSTSRESKVFRRRFRIPHVFFLELVDLVKARKW--FPTKEVDISGR---MCIPVELKVLSALQVLGRGNFFDDVSQ 449 KR+R V R DY PWA ML + + LQD ++RE+K FRRRFR+P+ FFL LVD VKA W F T E ++ GR CIPVE KVL+ L++LGRGN+FDDVS+ Sbjct: 50 KRRRTVRPRADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSE 153
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A6H5JP98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP98_9PHAE) HSP 1 Score: 101 bits (252), Expect = 5.760e-24 Identity = 67/149 (44.97%), Postives = 92/149 (61.74%), Query Frame = 3 Query: 18 VAAVAAAVAAYRHRKQRIKNIAHSVLSLEYLGEEEEKSSQDDGHEVKRQRRVFQRPDYTQSPWAVMLRHEGLQDSTSRESKVFRRRFRIPHVFFLELVDLVKARKW--FPTKEVDISGR---MCIPVELKVLSALQVLGRGNFFDDVSQ 449 +A ++ A AA +++Q + V SL + EEE D KR+ V R DY V+ + + LQD ++RE+K FRRRFR+P+ FFL LVD VKA KW F T E ++ GR CIPVE+KVL+ L++LGRGN+FDDVS+ Sbjct: 11 LAVLSLAFAALHYQQQLL------VASLRQMRREEEDGC-DGEPRPKRRLTVRPRADYALPRARVLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGKWPVFTTDEFELGGRGTRRCIPVEIKVLAVLRILGRGNYFDDVSE 152
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 105 bits (262), Expect = 7.630e-24 Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 3 Query: 156 KRQRRVFQRPDYTQSPWAVML-RHEGLQDSTSRESKVFRRRFRIPHVFFLELVDLVKARKW--FPTKEVDISGR---MCIPVELKVLSALQVLGRGNFFDDVSQ 449 KR+R V R DY PWA ML + + LQD ++RE+K FRRRFR+P+ FFL LVD VKA W F T E ++ GR CIPVE KVL+ L++LGRGN+FDDVS+ Sbjct: 50 KRRRTVRPRADYRTLPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSE 153
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A6H5KPT7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT7_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.090e-22 Identity = 52/96 (54.17%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 111 GEEEEKSSQDDGHEVKRQRRVFQRPDYTQSPWAVMLRHEGLQDSTSRESKVFRRRFRIPHVFFLELVDLVKARKWFPTKEVDISGRMCIPVELKVL 398 G+E E G VKR RRV RPDY S W ML GL++ SRE K+FR RFRIP+ F EL++LVK +K FP ++ D++GRMCIPVELKV+ Sbjct: 54 GDELEDEGLGGGSPVKRTRRVLPRPDYRASFWWRMLGETGLKEPASREVKLFRGRFRIPYQFLTELMELVKKKKRFPMRKKDVAGRMCIPVELKVM 149
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.180e-20 Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 3 Query: 153 VKRQRRVFQRPDYTQSPWAVMLRH--EGLQDSTSRESKVFRRRFRIPHVFFLELVDLVKARKW--FPTKEVDISGR---MCIPVELKVLSALQVLGRGNFFDDVSQ 449 KR+R V+ RPDY S WA+MLR + L D T++++++FRRRFR+P+ FLELV +K+ W F T D+ GR CIPVELKVL GRGNFFDD+ Q Sbjct: 52 AKRKRTVYPRPDYHNSAWAIMLREKEDALADPTTKDARLFRRRFRMPYPIFLELVKEIKSAGWKGFTTDATDLGGRGTRPCIPVELKVL------GRGNFFDDIPQ 151
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 7.210e-20 Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 3 Query: 165 RRVFQRPDYTQSPWAVML------RHEGLQDSTSRESKVFRRRFRIPHVFFLELVDLVKARKWFPTKEVDISGRMCIPVELKVLSALQVLGRGNFFDDVSQ 449 R +RPDY+ S W V L R G +SRE+K FR FR+PH FF VDLV R FPT D++GR C+P+ELKVL LQVLGRGN F DV+Q Sbjct: 33 RETRERPDYSSSAWGVRLANLESLRIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLV--RTVFPTATRDVAGRQCVPLELKVLGVLQVLGRGNCFADVAQ 131
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A6H5KLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF8_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 1.280e-19 Identity = 59/116 (50.86%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 120 EEKSSQDDGHEVKRQRRVFQRPDYTQSPWAVML-RHEGLQDSTSRESKVFRRRFRIPHVFFLELVDLVKARKW--FPTKEVDISGR---MCIPVELKVLSALQVLGRGNFFDDVSQ 449 EE+ D+ K +R V R D PWA ML + + LQD ++RE+K FRRRFR+P+ FFL LVD VKA KW F T E ++ GR CIPVE+ VL ++LGRGN+FDDVS+ Sbjct: 4 EEEDGCDEEPRPKCRRTVRPRADDRALPWARMLEKADLLQDPSTREAKQFRRRFRVPYPFFLSLVDGVKAGKWPGFTTNEFELGGRGTRRCIPVEIDVL---RILGRGNYFDDVSE 116
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 6.340e-18 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 150 EVKRQRRVFQRPDYTQSPWAVMLRH-EGLQDST-----SRESKVFRRRFRIPHVFFLELVDLVKARKWFPTKEVDISGRMCIPVELKVLSALQVLGRGNFFDDVS 446 E R R RPDY +S W + L E L+ S SRE++ FR FR+P+ FFLE V++V R FP +E D+ GR+C+P+ELKVL LQVLGRGN F DV+ Sbjct: 126 EAIRTRESRPRPDYNKSAWGLRLAQMESLRCSHNLAQHSREARAFRADFRVPYEFFLEFVEMV--RPVFPAREHDVCGRLCVPLELKVLGVLQVLGRGNCFADVA 228
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Match: A0A7S0W0D1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0D1_9CRYP) HSP 1 Score: 62.4 bits (150), Expect = 1.550e-8 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 180 RPDYTQSPWAVMLR-----HEGLQDSTSRESKVFRRRFRIPHVFFLELVDLVKARKWFPTK-EVDISGRMCIPVELKVLSALQVLGRGNFFDDVSQ 449 R D +S W L H + RE + + RRFRIP+ F ELV +V+ D +GR C P+ELKVLSAL+VLGRG +FDD + Sbjct: 79 RGDPWESSWGKQLLRMREFHATEEGPPRREERTWLRRFRIPYPAFEELVGVVQRDLGLDNHARCDAAGRPCKPIELKVLSALRVLGRGCYFDDAEE 174 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig101.203.1 >prot_F-serratus_M_contig101.203.1 ID=prot_F-serratus_M_contig101.203.1|Name=mRNA_F-serratus_M_contig101.203.1|organism=Fucus serratus male|type=polypeptide|length=148bp MDDCVAAVAAAVAAYRHRKQRIKNIAHSVLSLEYLGEEEEKSSQDDGHEVback to top mRNA from alignment at F-serratus_M_contig101:801070..802597- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig101.203.1 ID=mRNA_F-serratus_M_contig101.203.1|Name=mRNA_F-serratus_M_contig101.203.1|organism=Fucus serratus male|type=mRNA|length=1528bp|location=Sequence derived from alignment at F-serratus_M_contig101:801070..802597- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig101:801070..802597- >mRNA_F-serratus_M_contig101.203.1 ID=mRNA_F-serratus_M_contig101.203.1|Name=mRNA_F-serratus_M_contig101.203.1|organism=Fucus serratus male|type=CDS|length=888bp|location=Sequence derived from alignment at F-serratus_M_contig101:801070..802597- (Fucus serratus male)back to top |