mRNA_F-serratus_M_contig1273.2028.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1273.2028.1
Unique NamemRNA_F-serratus_M_contig1273.2028.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 3.460e-43
Identity = 100/214 (46.73%), Postives = 142/214 (66.36%), Query Frame = 1 
Query:  157 MEKAKATVKNICTKLGQPWDGKRKDSP-LSLELLTEKARVKVARLRQQRETLKDSGRANSKAQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRD 795
            +EKA   + N+  K G  WDG R +S  L++E L  K  V+V+R R ++E  K   R+ +K +V+ QL +A  L+K+K  L+D L   ME++  ER +R  +W  +R+++A +TSR F  +L++ GASG   F +  + + LT+ ++   N  QC+D KLLSGGE S ATLALLLALG+  + PFRVMDEFDVFMDA  RNIAIKQ++ FA+RD
Sbjct: 1006 LEKANLYMTNMRAKDGLEWDGVRVESRGLTVEQLEHK--VQVSRKRYEKEREKRCKRSKTKEEVESQLLQAYNLFKEKEKLADTLEGNMEMLSNERNQRTRRWRQMRDFVARQTSRLFDAYLQEKGASGEVRFDNECQTLGLTYQKDSSDNASQCSDVKLLSGGERSFATLALLLALGQSHECPFRVMDEFDVFMDAMSRNIAIKQVIEFAKRD 1217
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 4.480e-27
Identity = 85/242 (35.12%), Postives = 136/242 (56.20%), Query Frame = 1 
Query:   70 VDKLVRETKNLEQLKINSKEAEDRLKDVVMEKAKATVKNICTKLGQPWDGKRKDSPLSLELLTEKARVKVARLRQQRETLKDSGRANSKAQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRD 795
            V+K+ +E ++L Q    +KE  ++  +  M+ AK+ +    ++   PWDG+R D P    +   +A++K A  R   + +K +    +KA V E+L +            +KL   M+++  ERL+R  KW   R+ +   T+R F   L +  A G   F+H+++ + L++      +  +C D + LSGGE S ATLALLL+LG H D PFRVMDEFDVFMDA  R+ AI +++ FA+R+
Sbjct:  883 VEKVEKELEHLAQ----TKEEAEKSVETAMDSAKSFMAK--SRRQPPWDGRRADDPGKRTVEALRAKLKQAEERYFNDPIKINMGNRTKAMVVEELIQEESTRGDMGWAINKLDSNMKMLSDERLKRREKWKTFRDVIPTWTARMFGDILAEKEAHGEVKFNHKKKTLGLSYQSQAHNDTSKCRDVRQLSGGEKSYATLALLLSLGAHHDCPFRVMDEFDVFMDAVSRDHAILEVLKFAKRN 1118
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A7S3UWL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL6_HETAK)

HSP 1 Score: 102 bits (255), Expect = 1.260e-22
Identity = 69/186 (37.10%), Postives = 104/186 (55.91%), Query Frame = 1 
Query:  241 SLELLTEKARVKVARLRQQRETLKDSGRANSKAQVKEQLAEAVRLYKQKRD-LSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRD 795
            S E + +  R +  +L+Q+RE  + + +  SK + + Q   A   Y+ K D L  K    M L + +  ER  K+ A   +    T+  F ++L+Q G+SG  HF+  E+ +Q+   ++      Q  D K LSGGE S  TLALLLALG +I+ PFRVMDEFD+FMDA  R +A++Q++     D
Sbjct:   17 SKEQIEKLIRRRTEQLKQKRE--QQALQRKSKQECETQYLRAKAKYRDKEDELKTKWTNAMALQK-DIAERMDKYKAFSKFFRRSTNHMFDEYLQQRGSSGGIHFNSNEKTLQIVVQKDNMDEATQTTDIKALSGGERSATTLALLLALGANIECPFRVMDEFDIFMDAMARKLAMQQVIEHGMAD 199
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A7S2DFF7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFF7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 5.290e-20
Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 1 
Query:  412 ETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIM 777
            E + L++ +  ER  +W  LR ++AN+T+  F Q+L++ G SG  +F+H EE +  T   N   +  Q     L SGGE S  T+ALLL+LGE I+ PFR+MDEFDVFMDA  R  A++ ++
Sbjct:  340 ENINLLQADLKERKSRWKDLRRFIANQTNMFFDQYLQKNGKSGRVNFNHNEETMTFTVCMNNQDSQTQSEVTSLFSGGERSYVTMALLLSLGECIECPFRIMDEFDVFMDAISRRKAMENLV 461
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A7S2W981_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W981_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.620e-20
Identity = 55/124 (44.35%), Postives = 78/124 (62.90%), Query Frame = 1 
Query:  418 MELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSR-NGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFA 786
            ++LM  +  +R   W   R+++AN T+  F Q L + G+SG   F H  + + LT  + N D N  Q  D K LSGGE S  TL+LLLALGE++++PFRVMDEFDVF+D   R IA++ ++  A
Sbjct:  131 IDLMIADVKQRQRTWRKFRSHIANMTNETFDQMLNKKGSSGEIAFDHSAKTLNLTVQKDNTDRNMSQTKDVKALSGGERSFVTLSLLLALGENLETPFRVMDEFDVFLDPMSRKIALETMIHVA 254
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A225W8L5_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8L5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.120e-19
Identity = 62/157 (39.49%), Postives = 92/157 (58.60%), Query Frame = 1 
Query:  337 AQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRN--GDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRDGK 801
            A++K+ +      YK K+   DK  E +E +R    ER   W  LR  +AN TS  F +++     +G   F H ++R+++   +N  G +   Q  D K LSGGE S   ++LLLALGE I+ PFRVMDEFDVFMD+  R++ I+ ++  A++DGK
Sbjct:  921 AELKDDMDAKKLKYKNKKTNFDKFRENLERIRSMLEERKRVWQILRKEIANRTSVEFNKYMCLNNFAGKLRFRHDDQRLEIAVLQNEVGASRASQVTDMKELSGGERSYTQVSLLLALGESIECPFRVMDEFDVFMDSVNRDMTIQLLVKAAKKDGK 1077
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A7R9VE37_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VE37_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.110e-19
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 1 
Query:  457 KWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFA 786
            +W   R Y+   T+ +F Q L + G++G   F H  + + L   ++      Q  D K LSGGE S  TLALLLALGE +++PFRVMDEFDVF+D   R IA+  +++ A
Sbjct:   17 RWREFRGYLVETTNISFDQMLNKKGSAGQLDFDHENQTLNLIVQKDNSNEMSQTKDVKALSGGERSFTTLALLLALGESLETPFRVMDEFDVFLDPVARKIALDNMVSAA 126
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: W2R5D0_PHYPN (SMC_N domain-containing protein n=24 Tax=Phytophthora TaxID=4783 RepID=W2R5D0_PHYPN)

HSP 1 Score: 96.3 bits (238), Expect = 9.420e-19
Identity = 59/157 (37.58%), Postives = 91/157 (57.96%), Query Frame = 1 
Query:  337 AQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRN--GDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRDGK 801
            A++++ L      Y+ K+   DK  + +E +R    ER   W  LR  +A+ TS  F + +E    +G   F H ++R+++   +N  G +   Q  D K LSGGE S   ++LLLALGE I+ PFRVMDEFDVFMD+  R++ I+ ++  A++D K
Sbjct:  938 AELRDDLEAKKLKYRNKKKNFDKFRDNLERIRAMLEERKRVWQILRKEIAHRTSMGFNRFMELNNFAGKLRFRHDDQRLEIAVLQNEVGASRASQVTDMKELSGGERSYTQVSLLLALGESIECPFRVMDEFDVFMDSVNRDMTIQLLVDAAKKDSK 1094
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: A0A8J5J7T2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J7T2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.040e-18
Identity = 59/157 (37.58%), Postives = 92/157 (58.60%), Query Frame = 1 
Query:  337 AQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRN--GDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRDGK 801
            A++++ L      Y+ K+   DK  + +E +R    ER   W  LR  +A+ TS  F +++     +G   F H ++R+++   +N  G +   Q  D K LSGGE S   ++LLLALGE I+ PFRVMDEFDVFMD+  R++ I+ ++  A++DGK
Sbjct: 2007 AELRDDLESKKLKYRSKKKNFDKFRDNLECIRTMLEERKRVWQILRKEIAHRTSMEFNKYMCLNNFAGKLKFRHDDQRLEIAVLQNEVGASRASQVTDMKELSGGERSYTQVSLLLALGESIECPFRVMDEFDVFMDSVNRDMTIQLLVDAAKKDGK 2163
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BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Match: G5A786_PHYSP (SMC_N domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A786_PHYSP)

HSP 1 Score: 90.1 bits (222), Expect = 1.180e-18
Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 1 
Query:  445 ERDIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRN--GDANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQVRNIAIKQIMAFAQRDGK 801
            ER   W  LR  +A+ TS  F +++     +G   F H ++R+++   +N  G +   Q  D K LSGGE S   ++LLLALGE I+ PFRVMDEFDVFMD+  R++ I+ ++  A++DGK
Sbjct:    4 ERKRVWQILRKEIAHRTSMEFNKYMHLNNFAGKLKFRHDDQRLEIAVLQNEKGASRASQVTDMKELSGGERSYTQVSLLLALGESIECPFRVMDEFDVFMDSVNRDMTIQLLVDAAKKDGK 124
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1273.2028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M2_ECTSI3.460e-4346.73Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D7G4M1_ECTSI4.480e-2735.12Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A7S3UWL6_HETAK1.260e-2237.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DFF7_9STRA5.290e-2043.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W981_9STRA7.620e-2044.35Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A225W8L5_9STRA1.120e-1939.49Structural maintenance of chromosomes protein n=1 ... [more]
A0A7R9VE37_9STRA6.110e-1942.73Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
W2R5D0_PHYPN9.420e-1937.58SMC_N domain-containing protein n=24 Tax=Phytophth... [more]
A0A8J5J7T2_9STRA1.040e-1837.58Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
G5A786_PHYSP1.180e-1842.15SMC_N domain-containing protein n=1 Tax=Phytophtho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1273contigF-serratus_M_contig1273:23226..28503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score171.4
Seed ortholog evalue5.8e-40
Seed eggNOG ortholog2880.D7G4M2
Preferred nameSMC6
KEGG koko:K12614,ko:K15014
KEGG TC2.A.57.1
KEGG Pathwayko03018,map03018
KEGG ModuleM00395
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000793,GO:0000794,GO:0000803,GO:0001674,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007568,GO:0007569,GO:0008094,GO:0008150,GO:0008152,GO:0009410,GO:0009987,GO:0010033,GO:0010243,GO:0014070,GO:0014074,GO:0016043,GO:0016462,GO:0016604,GO:0016605,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019899,GO:0022402,GO:0030915,GO:0031000,GO:0031625,GO:0031974,GO:0031981,GO:0032200,GO:0032502,GO:0032991,GO:0033554,GO:0033676,GO:0034641,GO:0035061,GO:0035861,GO:0036270,GO:0042221,GO:0042493,GO:0042585,GO:0042592,GO:0042623,GO:0043073,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043279,GO:0044237,GO:0044238,GO:0044260,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048518,GO:0048522,GO:0048869,GO:0050000,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051276,GO:0051304,GO:0051640,GO:0051641,GO:0051716,GO:0051983,GO:0051984,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0071139,GO:0071704,GO:0071840,GO:0090304,GO:0090398,GO:0090734,GO:0097159,GO:0097240,GO:0098687,GO:0106068,GO:1901360,GO:1901363,GO:1901698,GO:1902494,GO:1990234,GO:1990683
EggNOG free text desc.double-strand break repair via homologous recombination
EggNOG OGsCOG1196@1,KOG0250@2759
EC3.6.4.13
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03019,ko03036
Exons8
Model size811
Cds size810
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1273.2028.1prot_F-serratus_M_contig1273.2028.1Fucus serratus malepolypeptideF-serratus_M_contig1273 23226..28503 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929207.036458-CDS-F-serratus_M_contig1273:23225..233251622929207.036458-CDS-F-serratus_M_contig1273:23225..23325Fucus serratus maleCDSF-serratus_M_contig1273 23226..23325 -
1690962750.2780273-CDS-F-serratus_M_contig1273:23225..233251690962750.2780273-CDS-F-serratus_M_contig1273:23225..23325Fucus serratus maleCDSF-serratus_M_contig1273 23226..23325 -
1622929207.0529532-CDS-F-serratus_M_contig1273:24885..249551622929207.0529532-CDS-F-serratus_M_contig1273:24885..24955Fucus serratus maleCDSF-serratus_M_contig1273 24886..24955 -
1690962750.2886095-CDS-F-serratus_M_contig1273:24885..249551690962750.2886095-CDS-F-serratus_M_contig1273:24885..24955Fucus serratus maleCDSF-serratus_M_contig1273 24886..24955 -
1622929207.0689135-CDS-F-serratus_M_contig1273:26018..261191622929207.0689135-CDS-F-serratus_M_contig1273:26018..26119Fucus serratus maleCDSF-serratus_M_contig1273 26019..26119 -
1690962750.2981677-CDS-F-serratus_M_contig1273:26018..261191690962750.2981677-CDS-F-serratus_M_contig1273:26018..26119Fucus serratus maleCDSF-serratus_M_contig1273 26019..26119 -
1622929207.084879-CDS-F-serratus_M_contig1273:26293..263741622929207.084879-CDS-F-serratus_M_contig1273:26293..26374Fucus serratus maleCDSF-serratus_M_contig1273 26294..26374 -
1690962750.3085985-CDS-F-serratus_M_contig1273:26293..263741690962750.3085985-CDS-F-serratus_M_contig1273:26293..26374Fucus serratus maleCDSF-serratus_M_contig1273 26294..26374 -
1622929207.1001327-CDS-F-serratus_M_contig1273:26668..267841622929207.1001327-CDS-F-serratus_M_contig1273:26668..26784Fucus serratus maleCDSF-serratus_M_contig1273 26669..26784 -
1690962750.316763-CDS-F-serratus_M_contig1273:26668..267841690962750.316763-CDS-F-serratus_M_contig1273:26668..26784Fucus serratus maleCDSF-serratus_M_contig1273 26669..26784 -
1622929207.11104-CDS-F-serratus_M_contig1273:26990..270681622929207.11104-CDS-F-serratus_M_contig1273:26990..27068Fucus serratus maleCDSF-serratus_M_contig1273 26991..27068 -
1690962750.326951-CDS-F-serratus_M_contig1273:26990..270681690962750.326951-CDS-F-serratus_M_contig1273:26990..27068Fucus serratus maleCDSF-serratus_M_contig1273 26991..27068 -
1622929207.126816-CDS-F-serratus_M_contig1273:27788..279651622929207.126816-CDS-F-serratus_M_contig1273:27788..27965Fucus serratus maleCDSF-serratus_M_contig1273 27789..27965 -
1690962750.339397-CDS-F-serratus_M_contig1273:27788..279651690962750.339397-CDS-F-serratus_M_contig1273:27788..27965Fucus serratus maleCDSF-serratus_M_contig1273 27789..27965 -
1622929207.142731-CDS-F-serratus_M_contig1273:28416..285031622929207.142731-CDS-F-serratus_M_contig1273:28416..28503Fucus serratus maleCDSF-serratus_M_contig1273 28417..28503 -
1690962750.3491824-CDS-F-serratus_M_contig1273:28416..285031690962750.3491824-CDS-F-serratus_M_contig1273:28416..28503Fucus serratus maleCDSF-serratus_M_contig1273 28417..28503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1273.2028.1

>prot_F-serratus_M_contig1273.2028.1 ID=prot_F-serratus_M_contig1273.2028.1|Name=mRNA_F-serratus_M_contig1273.2028.1|organism=Fucus serratus male|type=polypeptide|length=270bp
MLAESFQEAQEKEVCRSGAYRKVVDKLVRETKNLEQLKINSKEAEDRLKD
VVMEKAKATVKNICTKLGQPWDGKRKDSPLSLELLTEKARVKVARLRQQR
ETLKDSGRANSKAQVKEQLAEAVRLYKQKRDLSDKLAETMELMRVERLER
DIKWVALRNYMANETSRAFTQHLEQIGASGNAHFHHREERVQLTFSRNGD
ANGRQCNDAKLLSGGESSLATLALLLALGEHIDSPFRVMDEFDVFMDAQV
RNIAIKQIMAFAQRDGKSRQ
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mRNA from alignment at F-serratus_M_contig1273:23226..28503-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1273.2028.1 ID=mRNA_F-serratus_M_contig1273.2028.1|Name=mRNA_F-serratus_M_contig1273.2028.1|organism=Fucus serratus male|type=mRNA|length=5278bp|location=Sequence derived from alignment at F-serratus_M_contig1273:23226..28503- (Fucus serratus male)
ATGCTGGCGGAAAGCTTCCAAGAGGCTCAGGAGAAGGAAGTTTGTCGAAG
TGGCGCATATCGCAAAGTCGTGGACAAGCTTGTCAGGGTAACTCATCATC
TGATCTCCTGTAGATTATTGATGTTCACAATTTTTGCACTATTAATAGTA
ATAAACATTTTTAACGTTGACGTAGTCGAATCCATTTTTTCACCCTACTA
CTAGTATGTCTGGTCAGCACTTTCAGTAAAGTATGGATCAACCGGGCATG
GTGCCCACACCAAAAACAGCCTCCCATTTATTCTTGAGAGCTTATTCCTT
GATTTGCGACCGGACTGTTTGGTGATATTTCAAATATGTATCTCTCATGT
GTATATATTGTTTCTGTTTCTCCAGTGAAACGCAATAAAATACACTTGGT
ACTCCTCTGAAGCTGCTTCTGCTGCCGCCGCTGCTGATACCTGAGCCGCT
TTATTCCACATGATCTATCGTAACGCCTGCTGTTCATGACACATGTTGGC
CATTTTGGTTTTATGTTGAATGCTGAATATGTTAATAGGAGACGAAGAAT
CTAGAACAGCTGAAAATAAACAGCAAAGAGGCGGAGGATAGGCTGAAGGA
CGTAGTAATGGAAAAGGCCAAGGCAACCGTGAAAAACATCTGCACTAAAT
TAGGCCAGCCTTGGGACGGGAAAAGGAAAGACTCCCCTCTGTCGCTCGAA
TTGCTAACAGAGAAGGTAAACAACTCTATAACTGACTCTATAACTAGCTC
TATAAATCATATTGACAGATCAAATGAGCTATTCAACGATGGGAGGGGGG
TAGCATGGATTGTGACGATTGTGTGCCTGAACTGAACTCAAGGGGATGGT
ATCAAAACACCCCCTTCCGACCCTCCCGGGCTCAAATTCGACTAAATACG
TGACGAGATAAGCCGGATCCGTAGTGGAATCCGTGCCGTGAGTGGTTGTG
AGTGGTTGACCATATATTTTGCTGTTGGTTGTTCTTGTTGCTGATAATGC
CAGTTGACGTACCAGTTTGCCCTCAACGCTGCTTGTGCTCTCCTCCCTGT
CTCACCTGTAAAGTACTGCAGGACCGGTCTCACCTGTCAACGCCTCTTCT
ACGCGAAAACAATAATATACTGTACTTACAGTACAAACAGAGTTTAGCTA
GAGAAGTACGCCAAGTTCTTTATTACAGCATTTGCCTTTCTTTGCGGCAC
AGCATTTGCCTCATTAGTCGCGCCTTTCGAAGTTTTTCACGTGGTGAGAA
GATTTATTCTACTTCCTTGCTTCCGCTGCCACTTGATGCATCCGTTCGCT
GTACTTTGGCACTATCTCCTACAATAAGGTCGATTTACGAGTGAATGTTT
TGTGTTGTGCTTGGACGATGTTTACAATCATACAATGTGTGATAATATTA
ATATAATAGTCTAACTGTACTGTTTTTAATGACAGGCGAGGGTGAAGGTT
GCCCGGCTACGGCAGCAGAGAGAGACGCTCAAAGACAGCGGCAGGGCCAA
CTCAAAGGCGCAGGTGAAATAGAACTAAAGAACGATCACGTACTGAAGAA
CGCCCTTTTCCGTATCATGTTATTTTGGAGTCAGTGTCAAAGGCTCGTGA
GCTCCATGTGGTGAAAATGTGGTGAACCTTTTACCAGCATGAAATGGGGC
TATTACAGGTAGGTAGGTACCTGTTCATGCCTGGTAATGCGTTGCACTGC
CTGATAATGACATCCTCAGGTGAAGGAGCAGCTGGCCGAAGCCGTGAGGC
TGTACAAGCAAAAGCGAGACCTGAGCGACAAGCTAGCAGAAACGATGGAG
CTGATGAGGGTAGAGCGCCTAGAGCGCGACATAAAGTGAGATAGAAAATG
TTAAATCTTCATCTTGACGATGAGTCTATTAATAGTATAAAACGTTTGTA
TTTTTCTTTTGGCTCTATTAAATAGTATAAAATGTTGCCGTCTGTTTCGT
ATGGTGTCGTAATTTCATAACCTGTATGGAGTATATATAAGCTGTATTTA
GTGCCTAGGTTTCGCTGAAGTAATCGTATGTACTGTTGATGCTTAGTTTT
ATCTCCAGTTCACGAATGAATACATACTGCCGTCTACTGTGTCTTCGATC
ATCATCATGATACCACCTCTATCATCCAGGTGGGTCGCGCTACGAAATTA
CATGGCGAACGAGACCAGCCGCGCTTTCACGCAACACCTGGAGCAGATCG
GCGCTTCGGGGTGAGAACGTGGAGGATGCATAATATTAATAGTGTACTTG
AGTAGTGAGAAAAGAAAGCGAAACCGTGCGTACACACCCCCACGAGAAAT
CAATCACGTCTTCCTCGTAAGTATCAGGTGGTATTTAACTCGCTACGTGT
TGTGTGTTTTGTGCTGTATCCGATCGTGCGAAAGCAACGCCCACTTCCAC
CACAGAGAAGAGAGGGTACAGCTGACCTTCAGCAGGAACGGTGATGCTAA
CGGTCGCCAATGCAACGACGCCAAGCTCTTGTCGGGTGGGTGTAAAGTTA
CACTTGGTTGTGATGTGCATTTGAAAATAGTTGTCAGGTACGAAGACCAG
TTATTATGTACAGTAATGAATAGTCTTGACATCGGTGAAGCCGCGTAAAA
TAGATAACACCTTGAAAACTGGTTCGTTGCAGAGGGTAACCCCTGGTCTT
CTATTATCAGAGATTATAAAAGGGCCGTACAGCATACTGGTATCAACGCA
TCAGCATCAGCATCAGCATCATCATTATTTGTGATAACAGCAGGTGCAAG
AAAGGAGAAGTCAGTCGTTATTACAGACTTTCTTAGCAAATGTAAATACC
GCAAGTATCGGAGTCTTGGCACACCCCCTAGACTGACTTTCCAGGCTCGA
TTGCTCCACAACTAAAACCATTTGCACACCAACCGATTGCTCTACATCTA
AAGAAAGCTCTCGACGAGGTCTTTCGAAAACCGCCCTTTTCCCTTTTCGG
CATTAGCACCTTATAACCCTCTTGGTTGTGGAGCAATTGGGCCTGGAAAG
TCAGTCTAGGGTGTGTGCTAAGACTCCGATACGTACGGTACCTCGTATTA
ATAGTATTAATAGAATTAATAGTGCGTGATACATATTAGCATCAATAGCT
CTAGACTATTGTATTGTAGTAATTGCTTTACCAAGTAGGTTTTGGCGTCG
TCTTTCTTAGGGCATGCCGTGTGAAATATGCTGTAGGCGAAAGGGGACGG
TCCGCACTCACCCTAACATAGCGGCGTGCTGACCCTATCCGGAGCACATT
GGGTCAATGCCTTTGATACTGGAGGCGTTTTCACTTTTTTTAAGCCAAGG
AATGGCCTCGCCATCTGTGCTCCCTCTGTGGTTCTATTCCTGGTACACAT
TTCTTCAAGTATACAAAGTAACACATGTGCGTACGCATTTAAGGACTATT
ATTATTTTCTTGTGGCGGGAGCGACCCACTAAAGCTATGTTTATTGGCAA
ACGAAGAGCCATGCAACACAAAGCTCTACCAGGTATTGTTGTACTGAACG
CTAAGCGCCTGCTGTCCCGCTGTATGTTCTCCTGCATTGTGTATACAGGC
GGGGAAAGCTCCCTAGCAACGCTGGCTCTGCTGCTTGCGCTCGGAGAGCA
CATCGATTCGCCCTTCCGGTGAGAAGTTTTAACCTAACCCACCTACTGGG
TATATTTACTGTAAACGCAGTGTTTGTGGACACACCGCCTGTGCTCATTC
TGCAGTTTTTATAGGCAAATACTTGTTTGGAGTGTCGAAACTTGCAGCAT
CAGCCATATTAAATAGAATGCACGGAAGGAGACACTATTGGCTATACTCG
CACTGTCGTAATAAAAGCCTATTAATAGGCACTATTGTACATATTTCATG
ATTCTATTGGAGGGCAGTGGAGTACAACTGATGTTGCTGTTTTCTCACAT
TCAGGAGCTTTGGAACCAAATGCATACTCCAGCAGTCCCAAATCTAATAT
ACTGTGGGTGACAAATCACGCGGTAACTAGAAAATAGAACTAGAAAAAAG
AATACCTGGTACCTGGTAGTGAGAGTTTTGTGTACGAAATGAAAGTAGTA
CTCACGCTCTCGCTACCCCGTCAAACTTTGAGGCGAGAAATTTGAAATAA
CGAAAGAGCAGAACCAACCCTACTGCGACGGCTACTCTCAAGCTTAAGGG
GGAAACTGCCTAGCCGAAAGTAAGCCCTGGTCCCTTTCCCGCGGGATTCG
CCGGAATCTCAATTTTTCGTCGGTAGTGAGGTGGGGGGAGGGTGGTTTCT
GTTTCTCTCTTCTTCGGTCGTTTTTTGGATTTACTTTGTGCTCTTCCTCG
TCCTCTTCCCCTTCCCACGTAGCGATGAACCGCTCTGTCCCAGTCCCCCT
GGAAGTCAAACACCCGTGCGTCTTCTTTCAAATATTCAAGTTAATCCTTC
TCCTCGGCGCTTCGCCCTCGCTTCGCCGTACCGTCGATCTCGTGGGTAGG
CGGTCATCACTCGTCTGGGTAGGCGGCCATCAAGCATGCGAACAATCGCA
CCTGGCCAAATGAGACGTGTCGTGTATATGGTAGTCTCGATGCTCTCTCG
CAAACGGGATTGTTCAAGGGTATTGAGGGGAAATACGCCCGGTTCGCTTT
TGTCTTCGTGTCTCTCCGACGATGACGATGGCGATGGCGATGGTGTTTAG
TGCGCAGCAAAACACGATGGCGTGTGGTTCAAAGTTTAGCGTAGTTGTCC
TGGCGTAGGGTTAACCTCGCGCATTCGTTCAAGAGGCCTCAGCAACTACA
CTATTTAGAGACCTTGCTAGTTTAGCCTTTACCATCTTGCGCCGCACATT
ATGGGCGCGTGAGCAATCTAACGCTTTGTAGTTCTTGAATACTGACGGCA
CGTATTCTTCTGCCAACGTAGCCAAGCTTGTGATGAAGGTGAAAAAAAAA
ACGCTTTCTGATTATTTTGGATTGTGGTCGAGACTTAGAGGCCCTCGCCC
TCTTACTCCCTCTATCTGTTATTTTACCGCGATAGACGACCGACCCTATA
ATAGTGACCCTAACCCTTCCCCTCGTTTGGAAAATAAAATAAGAAAGTGA
ATAATGATTCATATACAGTACATTATTTTGTTAAACTATTACTTACAGAA
CCGATACAATTTCGCGGGAGTGTTTCGTTTGCTCTCCCATAAGTCTGATT
ATATTCCTCCCTGTCTTCTGCGAACCAGGGTTATGGATGAGTTCGACGTT
TTTATGGACGCCCAGGTCCGCAACATCGCGATTAAGCAGATCATGGCCTT
CGCACAGAGGGATGGAAAGTCGAGGCAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1273:23226..28503-

>mRNA_F-serratus_M_contig1273.2028.1 ID=mRNA_F-serratus_M_contig1273.2028.1|Name=mRNA_F-serratus_M_contig1273.2028.1|organism=Fucus serratus male|type=CDS|length=1620bp|location=Sequence derived from alignment at F-serratus_M_contig1273:23226..28503- (Fucus serratus male)
ATGCTGGCGGAAAGCTTCCAAGAGGCTCAGGAGAAGGAAGTTTGTCGAAG
TGGCGCATATCGCAAAGTCGTGGACAAGCTTGTCAGGATGCTGGCGGAAA
GCTTCCAAGAGGCTCAGGAGAAGGAAGTTTGTCGAAGTGGCGCATATCGC
AAAGTCGTGGACAAGCTTGTCAGGGAGACGAAGAATCTAGAACAGCTGAA
AATAAACAGCAAAGAGGCGGAGGATAGGCTGAAGGACGTAGTAATGGAAA
AGGCCAAGGCAACCGTGAAAAACATCTGCACTAAATTAGGCCAGCCTTGG
GACGGGAAAAGGAAAGACTCCCCTCTGTCGCTCGAATTGCTAACAGAGAA
GGAGACGAAGAATCTAGAACAGCTGAAAATAAACAGCAAAGAGGCGGAGG
ATAGGCTGAAGGACGTAGTAATGGAAAAGGCCAAGGCAACCGTGAAAAAC
ATCTGCACTAAATTAGGCCAGCCTTGGGACGGGAAAAGGAAAGACTCCCC
TCTGTCGCTCGAATTGCTAACAGAGAAGGCGAGGGTGAAGGTTGCCCGGC
TACGGCAGCAGAGAGAGACGCTCAAAGACAGCGGCAGGGCCAACTCAAAG
GCGCAGGCGAGGGTGAAGGTTGCCCGGCTACGGCAGCAGAGAGAGACGCT
CAAAGACAGCGGCAGGGCCAACTCAAAGGCGCAGGTGAAGGAGCAGCTGG
CCGAAGCCGTGAGGCTGTACAAGCAAAAGCGAGACCTGAGCGACAAGCTA
GCAGAAACGATGGAGCTGATGAGGGTAGAGCGCCTAGAGCGCGACATAAA
GTGAAGGAGCAGCTGGCCGAAGCCGTGAGGCTGTACAAGCAAAAGCGAGA
CCTGAGCGACAAGCTAGCAGAAACGATGGAGCTGATGAGGGTAGAGCGCC
TAGAGCGCGACATAAAGTGGGTCGCGCTACGAAATTACATGGCGAACGAG
ACCAGCCGCGCTTTCACGCAACACCTGGAGCAGATCGGCGCTTCGGGGTG
GGTCGCGCTACGAAATTACATGGCGAACGAGACCAGCCGCGCTTTCACGC
AACACCTGGAGCAGATCGGCGCTTCGGGCAACGCCCACTTCCACCACAGA
GAAGAGAGGGTACAGCTGACCTTCAGCAGGAACGGTGATGCTAACGGTCG
CCAATGCAACGACGCCAAGCTCTTGTCGGCAACGCCCACTTCCACCACAG
AGAAGAGAGGGTACAGCTGACCTTCAGCAGGAACGGTGATGCTAACGGTC
GCCAATGCAACGACGCCAAGCTCTTGTCGGGCGGGGAAAGCTCCCTAGCA
ACGCTGGCTCTGCTGCTTGCGCTCGGAGAGCACATCGATTCGCCCTTCCG
GCGGGGAAAGCTCCCTAGCAACGCTGGCTCTGCTGCTTGCGCTCGGAGAG
CACATCGATTCGCCCTTCCGGGTTATGGATGAGTTCGACGTTTTTATGGA
CGCCCAGGTCCGCAACATCGCGATTAAGCAGATCATGGCCTTCGCACAGA
GGGATGGAAAGTCGAGGCAGGGTTATGGATGAGTTCGACGTTTTTATGGA
CGCCCAGGTCCGCAACATCGCGATTAAGCAGATCATGGCCTTCGCACAGA
GGGATGGAAAGTCGAGGCAG
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