prot_F-serratus_M_contig891.20288.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig891.20288.1
Unique Name	prot_F-serratus_M_contig891.20288.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	62

Homology

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BLAST of mRNA_F-serratus_M_contig891.20288.1 vs. uniprot
Match: D7FSH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH6_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.350e-22
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0

Query:    1 MVMRSLPRAGGGHDDDHPHLVFDTPTKGPFTKTQAGVVVGGGVFLAIAIVIGAVSHQQIKHG 62
            +V RS+PRAGGGHDD HPHLVF+T  K PFTK  AG++VGGGVF  I IV+GA++HQ  KHG
Sbjct:    4 IVSRSMPRAGGGHDD-HPHLVFET-AKEPFTKFSAGLIVGGGVFAGIGIVVGAITHQNYKHG 63

[Close]

BLAST of mRNA_F-serratus_M_contig891.20288.1 vs. uniprot
Match: A0A6H5JHE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHE0_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 6.160e-21
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0

Query:    1 MVMRSLPRAGGGHDDDHPHLVFDTPTKGPFTKTQAGVVVGGGVFLAIAIVIGAVSHQQIKHG 62
            +V RS+PRAGGGHDD HPHLVFDT  K PFTK  AG++VGG VF  I IV+GAV+HQ  KHG
Sbjct:   21 IVTRSMPRAGGGHDD-HPHLVFDT-AKEPFTKFSAGLLVGGLVFSGIGIVVGAVTHQNYKHG 80

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig891.20288.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig891.20288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FSH6_ECTSI	2.350e-22	67.74	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JHE0_9PHAE	6.160e-21	69.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 55..62
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..34
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..54
None	No IPR available	TMHMM	TMhelix		coord: 33..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig891	contig	F-serratus_M_contig891:265400..266337 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig891.20288.1	mRNA_F-serratus_M_contig891.20288.1	Fucus serratus male	mRNA	F-serratus_M_contig891 265394..266337 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig891.20288.1 ID=prot_F-serratus_M_contig891.20288.1|Name=mRNA_F-serratus_M_contig891.20288.1|organism=Fucus serratus male|type=polypeptide|length=62bp
MVMRSLPRAGGGHDDDHPHLVFDTPTKGPFTKTQAGVVVGGGVFLAIAIV
IGAVSHQQIKHG