mRNA_F-serratus_M_contig891.20283.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig891.20283.1
Unique NamemRNA_F-serratus_M_contig891.20283.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A6H5L229_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L229_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 2.240e-79
Identity = 170/335 (50.75%), Postives = 199/335 (59.40%), Query Frame = 1
Query:  199 PAPPYPGPIDNSGLVMDADTGGKIPGTGRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASR-------------------------SAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNP-------ANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMK-------GGAESGKAKAKVEMHPCSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDSEEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            P   +PGPIDNS LV+DA T G IPGTGRRLR+RLVRGYHFV+VPQEAW ALHAWYGGGPALPR LVP++D  SG +V+EPQL+PEFSRLDPVLR     S                          +   ++ N L    +AAA       GS  G    G  T P       A+P+               XXXXXXXXXXX             G  +    K     +PC++CG P K KC SC K  +RV YCS +CQ AHWR+HK +CG + S   L+ AKR KAGL+NLGNTCFLNSAVQCLSHVQPLTRH L++AF  D+N TNPLG
Sbjct:  720 PPAAHPGPIDNSELVLDAGTPGTIPGTGRRLRLRLVRGYHFVLVPQEAWIALHAWYGGGPALPRALVPIRDSDSGRVVYEPQLFPEFSRLDPVLRSATVCSSGIVGNNDDAPSNEDFASDKEDGPIANGSPVEENPLVAEVAAAADSKEDTGGSVDGNGEGGESTGPPPAPTEAASPAPPGAVAEGPQENRSGXXXXXXXXXXXXXXXXXXXXXXXXGSVDKKTKKTGDAWYPCAACGAPCKKKCTSCSKTQHRVSYCSPACQKAHWRFHKKFCGGKGSGTGLSLAKRGKAGLDNLGNTCFLNSAVQCLSHVQPLTRHVLSNAFQEDLNLTNPLG 1054          
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: D7FSH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH2_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 2.190e-75
Identity = 195/388 (50.26%), Postives = 228/388 (58.76%), Query Frame = 1
Query:   79 PAVTAPAAARENGDSATQGV-RCGDVLAAGNCSKAGESDEAPAPPYPGPIDNSGLVMDADTGGKIPGTGRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRS--------AHTLDANLLPEAR---------------------SAAATIAVKN---------DGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKA-------------KAKVEMHPCSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDSEEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            PA     AA  +GD     V + G+    G+   A      P   +PGPIDNS LV+DA T G IPGTGRRLR+RLVRGYHFV+VPQEAW ALHAWYGGGPALPR LVP++D  SG +V EPQL+PEFSRLDPVLR     S S        ++   AN  P A                      +AAA               DG   G    G  T P  P  XXXXXXXXXXXXXXXXXXXXXXXXX    ++     G+              K +   +PC++CG P+  KC SC K  +RV YCS +CQ AHWR+HK +CG + S   L+ AKR KAGL+NLGNTCFLNSAVQCLSHVQPLTRH L++AF  D+N TNPLG
Sbjct:  617 PASAGSGAAMGDGDGGEGPVEKDGEAGTNGHQKTAAPQRVEPPAAHPGPIDNSELVLDAGTPGTIPGTGRRLRLRLVRGYHFVLVPQEAWIALHAWYGGGPALPRALVPIRDSDSGRVVFEPQLFPEFSRLDPVLRSATVCSSSVVGDNDAPSNEDLANDKPTAXXXXXXXXXXXXXXXXEKSPLVAAAAXXXXXXXXEDTGGSVDGKGVGNGVGGESTEPP-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQVDRAGGRGXXXXXXXXDKKTKKNEDAWYPCAACGAPSNKKCTSCSKTQHRVSYCSPACQKAHWRFHKKFCGGKGSGAGLSLAKRGKAGLDNLGNTCFLNSAVQCLSHVQPLTRHVLSNAFQEDLNLTNPLG 1003          
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A6A3P1V5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P1V5_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.980e-29
Identity = 103/332 (31.02%), Postives = 138/332 (41.57%), Query Frame = 1
Query:  169 CSKAGESDEAPAP------PYPGPIDNSGLVMDADTGGKIPGTGRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHP----------CSSCGRPTKY--KCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDSEE--------ALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            C   G  D+  AP      P P  I+N  L+  +         G  LR +L   YH+V++PQE W AL  WYGGGP + R +V V D   G + +   +YPE    D     T   ++ + TL  N    AR                                                          NG K  A +G  K  V+  P          C +C + T    +C SC      ++YC  +CQ +HW+YHKG C    S E         L   +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ +  D+N  NPLG
Sbjct:   99 CEFVGYEDKQDAPAAGSGNPAPSRINNLPLLHVSAETPLDELMGGPLRPQLKENYHYVLIPQEVWDALVIWYGGGPTVARFVVQVGDPEIGNVFNRVNVYPEQPE-DDEPEVTTNGTKDSSTLKTN--ETARE--------------------------------------------------------MNGTKDAAATG-GKLAVQRKPSVVSSSIPKLCGACRKTTGSLKRCGSCQL----IWYCGANCQMSHWKYHKGVCRSTLSAEEKEDEILQGLKAERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNQYKKDLNRDNPLG 366          
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: D0N8U1_PHYIT (Ubiquitin carboxyl-terminal hydrolase n=26 Tax=Phytophthora TaxID=4783 RepID=D0N8U1_PHYIT)

HSP 1 Score: 129 bits (323), Expect = 5.350e-29
Identity = 91/280 (32.50%), Postives = 123/280 (43.93%), Query Frame = 1
Query:  280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHP-CSSCGRPTKY--KCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRR--------DSEEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            G  LR +L   YH+V++PQE W AL  WY GGP + R +V V D   G   +  Q+YPE                          PE     AT     D S + + ANG   + A                               +G K   +   A     +   C +C +PT    +C SC      ++YC  +CQ +HW+YHKG C           D  + L   +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ +  D+N  NPLG
Sbjct:  139 GGPLRPQLKENYHYVLLPQEVWDALLIWYSGGPTIARFVVQVGDPELGNAFNRVQVYPEQ-------------------------PEDAEPEATTNGTKDSSMQKIDANGKNDDSA-------------------------------DGAKLAVQRKPAAVSCSIPKICGACRKPTGSLKRCGSCQL----IWYCGANCQMSHWKYHKGVCRSTLTAEEKEDDILQGLQAERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNRYKKDLNRDNPLG 358          
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A2P4Y055_9STRA (Ubiquitin-specific protease n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y055_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.550e-28
Identity = 90/289 (31.14%), Postives = 127/289 (43.94%), Query Frame = 1
Query:  280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHP----------CSSCGRPTKY--KCNSCMKNANRVFYCSKSCQAAHWRYHKGYC-----GRRDSEE---ALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            G  LR +L   YH+V++PQE W AL  WYGGGP + R +  V D   G   +  Q+YPE    +    P V  + +  T D+            +  +++GS   +                                         NG K   +S  AK  V+  P          C +C + T    +C SC      ++YC  +CQ +HW+YH+  C          EE    L   +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ +  D+N  NPLG
Sbjct:  138 GGPLRPQLKENYHYVLIPQEVWDALLVWYGGGPTIARFVTQVGDPELGNDFNRVQVYPEQPEDE---EPEVTTNGTCGTKDS-----------AMQKRSEGSKFDV-----------------------------------------NGKKDSTDSTGAKLAVQRKPSTVSSSIPKLCGACRKTTGSLKRCGSCQL----IWYCGANCQMSHWKYHRIVCRSTLTAEEKEEEILQGLQTERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNQYKKDLNVDNPLG 367          
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A662XHX6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHX6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.400e-28
Identity = 100/315 (31.75%), Postives = 136/315 (43.17%), Query Frame = 1
Query:  208 PYPGPIDNSGLVMDADTGGKIPGTGRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLD--PVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKA---KAKVEMHPCSSCGRPTKYKCNSCMK---------NANRVFYCSKSCQAAHWRYHKGYCGRRDSEE--------ALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            P P  I+N  L+   D        G  LR +L   YH+V++PQE W AL  WYGGGP + R +V V D   G   +  Q+YPE +  D  P +   VK ++S                         S +G+ A G                                     NG K  A S KA   K  V+  P ++     K  C +C K         N   ++YC  +CQ +HW+YHK  C  + S E         L   +R K GL NLGNTCF+NSA+QCLSH++ LT +FL++ +  D+N  NPLG
Sbjct:  109 PAPSRINNLPLLHVGDETPLDDLMGGPLRPQLKENYHYVLLPQEVWDALLIWYGGGPTIARFVVQVGDPTLGNAFNRVQVYPEQTEQDEEPEVTTVVKDAKS-------------------------SQKGVEAAG------------------------------------MNGTKAPA-SPKATGTKLAVQRKPSTASSSIPKL-CGACRKTTGSLKRCGNCQLIWYCGTACQMSHWKYHKLVCRSKLSAEEKEEEIMQGLAGERRGKMGLRNLGNTCFMNSAIQCLSHLELLTHYFLSNDYKKDLNRDNPLG 360          
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A2D4CH07_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CH07_PYTIN)

HSP 1 Score: 125 bits (315), Expect = 6.380e-28
Identity = 94/277 (33.94%), Postives = 126/277 (45.49%), Query Frame = 1
Query:  280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHPCSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYC----GRRDSEEALT----FAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            G  LR +L  GYH+V++PQE W AL  WYGGGPA+ R +V V D A G      ++YPE +                H+ D            T    +D      +A  +P  P N +                               KG      + A  +M  CS+C R T      C  N   V+YC   CQ AHW++H+  C    G  + E A+       +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ +L D+N  NPLG
Sbjct:  678 GAPLRPQLKEGYHYVLLPQEVWDALLCWYGGGPAVARFVVEVGDPALGNAFKRVEVYPELA---------------GHSDDGP----------TDTDDDD------VAMEDPVTPMNGTA------------------------------KGLVRRVSSTAAPKM--CSAC-RQTPASLKRC-GNCQLVWYCGAGCQTAHWKFHRSVCRAALGVDEKETAILDHIESERRGKTGLRNLGNTCFMNSALQCLSHVELLTRYFLSNQYLRDLNKDNPLG 889          
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A0W8D2F7_PHYNI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D2F7_PHYNI)

HSP 1 Score: 124 bits (310), Expect = 3.110e-27
Identity = 89/286 (31.12%), Postives = 124/286 (43.36%), Query Frame = 1
Query:  280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHPCSSCGRPTKYKCNSCMK---------NANRVFYCSKSCQAAHWRYHKGYCGRR--------DSEEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            G  LR +L   YH+V++PQE W AL  WYGGGP + R +V V D   G   +  Q+YPE  + +    P V  +    T D+++  ++                                                           NG K  +  G AK  V+  P +      K  C +C K         N   ++YC  +CQ +HW+YHKG C           D  + L   +R K GL NLGNTCF+NSA+QCLSHV+ LTR+FL++ +  D+N  NPLG
Sbjct:  142 GGPLRPQLKENYHYVLIPQEVWDALLIWYGGGPTIARFVVQVGDPELGNAFNRVQVYPEQPQDE---EPEVTTNG---TKDSSMQKKSE---------------------------------------------------------VNGNKEDSGDG-AKLAVQRKPVAVSSSIPKI-CGACRKTTGSLKRCGNCQLIWYCGANCQMSHWKYHKGVCRSTLTAEEKEDDILQGLQAERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNQYKKDLNRDNPLG 362          
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: A0A5D6XTB0_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTB0_9STRA)

HSP 1 Score: 122 bits (306), Expect = 8.730e-27
Identity = 88/286 (30.77%), Postives = 123/286 (43.01%), Query Frame = 1
Query:  271 PGT------GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRLDP-VLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHP-CSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDS------EEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            PGT      G  LR +L   YH+V++PQEAW AL  WYGGGP + R +V V D   G      Q+YPE +  +   L+ T     +     +++ P                         P  P +P+                               K   E     A V +   C +C R T      C  N   ++YC  +CQ +HW+YHK  C    +      ++     +R K GL NLGNTCF+NSA+QCLSHV+ LT +FL++ +  D+N  NPLG
Sbjct:  134 PGTALDELMGGPLRPQLRENYHYVLIPQEAWDALLCWYGGGPTIARFVVEVGDPTLGNAFKMVQVYPEQAEAEAEALKNTATNKTAVKATVSHVAPA------------------------PGKPLSPNA------------------------------KSSVERRAVPASVSVPKICGAC-RSTAGSLKRC-GNCQLIWYCGAACQTSHWKYHKAACKAATASAGDMAQDGAAEERRGKMGLRNLGNTCFMNSALQCLSHVELLTSYFLSNRYQKDLNRDNPLG 363          
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Match: K3WVW9_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVW9_GLOUD)

HSP 1 Score: 121 bits (304), Expect = 1.640e-26
Identity = 88/279 (31.54%), Postives = 124/279 (44.44%), Query Frame = 1
Query:  280 GRRLRVRLVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLYPEFSRL--DPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLLANGNPTNPANPSTXXXXXXXXXXXXXXXXXXXXXXXXXLTNGMKGGAESGKAKAKVEMHPCSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGYCGRRDS--------EEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDAFLVDVNTTNPLG 1086
            G  LR +L   YH+V++PQE W AL  WYGGGP + R ++ V D   G    + Q+YPE + +  D ++ P  K   +A +    + P          VK+    + +     P +P  P                                  GA             C S   P K +C SC      ++YC  +CQ +HW+YHK  C    S        +E     +R K GL NLGNTCF+NSA+QCLSHV+ LT +FL++ +  D+N  NPLG
Sbjct:  153 GGPLRSQLKENYHYVLLPQEVWDALLCWYGGGPTIARFVMEVGDPTLGNSFKQVQVYPEQADIEADALVAPGEKIKVNASSQSGKMSPSG--------VKSSVQRKPV-----PASPLIPKIC-------------------------------GA-------------CRSTTGPLK-RCGSCQL----IWYCGAACQTSHWKYHKTVCRSATSSEDKEAMIQEGSAEERRGKMGLRNLGNTCFMNSALQCLSHVEILTSYFLSNQYQKDLNKDNPLG 369          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig891.20283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L229_9PHAE2.240e-7950.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSH2_ECTSI2.190e-7550.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6A3P1V5_9STRA3.980e-2931.02Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phyt... [more]
D0N8U1_PHYIT5.350e-2932.50Ubiquitin carboxyl-terminal hydrolase n=26 Tax=Phy... [more]
A0A2P4Y055_9STRA1.550e-2831.14Ubiquitin-specific protease n=1 Tax=Phytophthora p... [more]
A0A662XHX6_9STRA2.400e-2831.75Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Noth... [more]
A0A2D4CH07_PYTIN6.380e-2833.94Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A0W8D2F7_PHYNI3.110e-2731.12Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Phyt... [more]
A0A5D6XTB0_9STRA8.730e-2730.77Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pyth... [more]
K3WVW9_GLOUD1.640e-2631.54Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Glob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig891contigF-serratus_M_contig891:219085..223775 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score270.8
Seed ortholog evalue9.4e-70
Seed eggNOG ortholog2880.D7FSH2
KEGG koko:K11835,ko:K11837,ko:K11847
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsCOG5560@1,KOG1870@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons6
Model size1094
Cds size1092
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig891.20283.1prot_F-serratus_M_contig891.20283.1Fucus serratus malepolypeptideF-serratus_M_contig891 219085..223775 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932598.398116-CDS-F-serratus_M_contig891:219084..2192301622932598.398116-CDS-F-serratus_M_contig891:219084..219230Fucus serratus maleCDSF-serratus_M_contig891 219085..219230 -
1690964379.4706788-CDS-F-serratus_M_contig891:219084..2192301690964379.4706788-CDS-F-serratus_M_contig891:219084..219230Fucus serratus maleCDSF-serratus_M_contig891 219085..219230 -
1622932598.436245-CDS-F-serratus_M_contig891:220140..2202551622932598.436245-CDS-F-serratus_M_contig891:220140..220255Fucus serratus maleCDSF-serratus_M_contig891 220141..220255 -
1690964379.4864233-CDS-F-serratus_M_contig891:220140..2202551690964379.4864233-CDS-F-serratus_M_contig891:220140..220255Fucus serratus maleCDSF-serratus_M_contig891 220141..220255 -
1622932598.4642336-CDS-F-serratus_M_contig891:220648..2210261622932598.4642336-CDS-F-serratus_M_contig891:220648..221026Fucus serratus maleCDSF-serratus_M_contig891 220649..221026 -
1690964379.5049155-CDS-F-serratus_M_contig891:220648..2210261690964379.5049155-CDS-F-serratus_M_contig891:220648..221026Fucus serratus maleCDSF-serratus_M_contig891 220649..221026 -
1622932598.4821568-CDS-F-serratus_M_contig891:221281..2213721622932598.4821568-CDS-F-serratus_M_contig891:221281..221372Fucus serratus maleCDSF-serratus_M_contig891 221282..221372 -
1690964379.5166993-CDS-F-serratus_M_contig891:221281..2213721690964379.5166993-CDS-F-serratus_M_contig891:221281..221372Fucus serratus maleCDSF-serratus_M_contig891 221282..221372 -
1622932598.498409-CDS-F-serratus_M_contig891:222967..2231331622932598.498409-CDS-F-serratus_M_contig891:222967..223133Fucus serratus maleCDSF-serratus_M_contig891 222968..223133 -
1690964379.5323434-CDS-F-serratus_M_contig891:222967..2231331690964379.5323434-CDS-F-serratus_M_contig891:222967..223133Fucus serratus maleCDSF-serratus_M_contig891 222968..223133 -
1622932598.5431576-CDS-F-serratus_M_contig891:223579..2237751622932598.5431576-CDS-F-serratus_M_contig891:223579..223775Fucus serratus maleCDSF-serratus_M_contig891 223580..223775 -
1690964379.551465-CDS-F-serratus_M_contig891:223579..2237751690964379.551465-CDS-F-serratus_M_contig891:223579..223775Fucus serratus maleCDSF-serratus_M_contig891 223580..223775 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig891.20283.1

>prot_F-serratus_M_contig891.20283.1 ID=prot_F-serratus_M_contig891.20283.1|Name=mRNA_F-serratus_M_contig891.20283.1|organism=Fucus serratus male|type=polypeptide|length=364bp
TADNAEAIEGGATGAGGEGSGEDDGDPAVTAPAAARENGDSATQGVRCGD
VLAAGNCSKAGESDEAPAPPYPGPIDNSGLVMDADTGGKIPGTGRRLRVR
LVRGYHFVVVPQEAWKALHAWYGGGPALPRLLVPVQDGASGIIVHEPQLY
PEFSRLDPVLRPTVKASRSAHTLDANLLPEARSAAATIAVKNDGSYRGLL
ANGNPTNPANPSTDPAYPSDDPAIPSNGPAIPSNDPAVLTNGMKGGAESG
KAKAKVEMHPCSSCGRPTKYKCNSCMKNANRVFYCSKSCQAAHWRYHKGY
CGRRDSEEALTFAKRCKAGLNNLGNTCFLNSAVQCLSHVQPLTRHFLTDA
FLVDVNTTNPLGE*
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mRNA from alignment at F-serratus_M_contig891:219085..223775-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig891.20283.1 ID=mRNA_F-serratus_M_contig891.20283.1|Name=mRNA_F-serratus_M_contig891.20283.1|organism=Fucus serratus male|type=mRNA|length=4691bp|location=Sequence derived from alignment at F-serratus_M_contig891:219085..223775- (Fucus serratus male)
ACAGCCGACAACGCGGAGGCTATCGAAGGAGGGGCTACAGGAGCTGGAGG GGAGGGAAGCGGGGAAGATGACGGGGACCCAGCCGTCACAGCCCCTGCTG CCGCCCGCGAGAACGGGGATAGCGCGACACAGGGCGTTAGGTGCGGGGAT GTGCTCGCAGCTGGGAACTGCTCGAAGGCCGGCGAGAGCGACGAGGGTGA GACCGTGACCCTCTTTCCTCCACCCTGTCGCCGCATTTTAGTTTTTGCGT GGCACACGACTCGTGACTTTTCTTTCTACTCCCTTTGTTGGTGGTTCGCA TGGGTGGCGAACCTTCAAAGAGGTGTATCTCCTGTCTGTCTCGAGCCTGT CGGGTCGCGCAGCAGGTGGCGGATAGAACCGAAACGTGTTCTCCCTTCCA GGTAACAGGCGCAAAATTATCAAAATATTGACTTTCCAGGAGGGGGAAAA TTACACCTGTACTCGCACTAGCTCTAGTTTTTTTAAGGAGGGCACATAAA ACTGATTTTTTGTACTTGAGACGCTTCTGGTTGGTGAGAGGAAACAAGGA GTGCGTTCGACCATGTGTACCTGTGTGTGCATCCTCCCTTTTCCGCTTCC CTTGGCGCCCTTTCTCGTTGAACCCCCCTTGTCGCCAAAAAGCGCCCGCG CCGCCGTACCCCGGTCCGATCGACAATTCTGGTCTCGTGATGGACGCGGA TACCGGCGGGAAGATCCCCGGGACGGGGCGCCGGCTTCGGGTGCGGCTCG TGCGGGGGTATCACTTCGTCGTGGTACCTCAGGAGGCTTGGAAAGCGCTG CACGCCTGGTGAGGAGGCCTGCGGATGATGCTGCGTTGCTCTGTGCTAGG CTGTGTTCCGCTCTGCCGGTGCTGCGAGAGTGACCATTGGAGCGCACTCC CCACCGCGGTCTGTTTTTATCCCTTCCAGGAGATAAATAGGGAGATGATA GAACGAGAGCCTTAACCGCTTCAGAGATTTTTTGGTGCCACGTAATCGTT CAGTAAATTTTGCAGTTTCAAGAAAAAACAAAACAAAAAACACACAAGTG GGTGCATAATGCATGCATGCACTTGAAATTGACACACGGTAAATGTGCAT TTTGGGGAATAGCTTCTTCCTGGTCTTGGGCAGCTCTAACCCCACTGGGA GCGCCTATTTTCAACCCATGGGTGATGGAGTAGAACCACCACCCAAACAC GCACGCGATGGAAACCCAAGGAAACTCCACCCAGCGCCCCTCCCCTTTTT CTACTGCTGCTGTGCCTCTTACCATGGAGGGAGGTATAGCTGATTTCTGC GTCAAAAATCGCCACGGTGCCGCTAGGTGATTTTGGACGTAAAAGTCAAT TGTACCTCCCTCCCTGGAACGAGATGCAGCAGCAGTGGATATCACGCGCG CGTCATGTGCGTCATAAGACAGCCCGCAGCCCACCGTAGGAATGCTGGTG GGTAACCCTGTTCTGTCTGGTGTGCCCACTGCTCTCTGGCAAAGCGCACA CGATGCGCGTGTGCTATCCACTCTACTGCTGATACGCCTCTTAACCATGG AGGGAGGTAGAGCTGGCTTCTCGGTACTGTCGATCACACCAGCATACTCC TCTAGAGCGGAAAGCTCACTCGCGTCGCGTGCGCCATAAAACAGCCTGCA GCCAGCAGTAGGAACTCTGTTGGGGTAGCCCCGTGCTGCCTGGTATGTCC ACTGCTCTCTGGCAATGGTTCCACGCACACGTGCTGTGGAGAACCGGAAA GAGGAGGGGCGTTGGGTGGGAGTTCCCCGGGTTTTCACGCGTGCGTGTTT GGGTGGTGGTTCTTCTCCACCACCCATGGGTTGTAAATAGGCGCTCCCAA CCCCACTGTAGTGTACCAATAATAGTATAGTGGGTACGGGAAAAGAGAGG CGCACAAAATTTGATCCATGGTGATTCTGAAAAGGCTGCACCCGTTACTG GAACTACCTAGAAGACTACTGGCCCTGCGCCAGCGGCCTCTCGGCAGTGA ACGCCATCGGTACGCAATTGTGTGACCTGATCAATTCGAGACTGACCCGA TGGCAATTGACGGTATAAATAAATGGGCGTCGTCGCGGAAAGCGTTTGGA ATCCCGTGAGTGAGCACCAGATTTAGCCCCAGTGTAGAAAACGAGCGGGC TGAAGTGGAACGGGACTGCCGAAACCATATCTCTAAACCGAATTCTCAGG CGCGAACGGGGAAAGGGAAACAAAAAATGTTTCTCTTTCCAGCTGACCAC AGCCAGGATTGGGAAACCATACCTGTACCCGGTAGATACATGCTCTGCTA TAAGTTAGGACCCCAAACATACATAAACAACCGGAGTTGGAACTTGTATT ATCCATCGCCAGTCGCTGTACGATGCTTGTTGGGTGGTCCATACCCATCA CAGGTACGGAGGTGGACCAGCACTCCCACGCCTACTTGTTCCCGTGCAGG ACGGGGCTTCCGGCATCATCGTGCACGAGCCCCAGCTGTACCCGGTGAGA TTTTTCGCGAGGTTCGATGCGTCTGTTGGGCTGTGAGCCATGCATGGGCA CTCAGCCCAAATCCACTTCTAAAAAATGATTAATATATACTCCGGAGTAT ATATATGAAATATATATATCTTGTAATTGTCTTGACACCGGATCCTGCAG CAAGCACATCGATATACGAGTGCTCGTGCTCATCCGCGTTCCCTTTGGGA TCTTGTCTGGTCTTGTTCGACACCGACATACCCGCTTCTCTGCTAGCAGG AGTTCTCCCGGCTGGACCCCGTCCTGCGACCAACCGTGAAAGCATCGCGC TCCGCTCACACGCTGGATGCGAACCTGCTGCCTGAGGCCCGGTCTGCCGC GGCAACAATAGCGGTCAAAAACGACGGTTCTTATCGCGGTCTCCTCGCCA ACGGCAATCCCACCAATCCTGCCAATCCGTCGACCGATCCTGCTTATCCG TCGGACGACCCCGCCATTCCGTCGAACGGCCCTGCCATTCCGTCGAACGA TCCGGCCGTTTTGACCAATGGGATGAAAGGAGGGGCGGAGAGCGGGAAGG CGAAGGCAAAGGTCGAGATGCACCCGTGCTCGTCCTGCGGACGCCCGACC AAGTACAAATGCAACAGCTGTATGAAGGTCAGTCGGTCATGAGTCAGTGT AGCCACAAGCAAGACCTGCGTTTATAGGCGGTTTTGCCTCCCCTGCGGCT AGTGCCGTACCTTTACATTTCTGAGCCAGGTGAACGCGGAATGCTCGAGG CTATAGCCGTATTTGTAGTAGACATATTTTGCAGATCTGATCCTTTTTGG GGCGGGGAGGAGGTCAAGTGCAAATCAGTATGCCTTCCTCGATTTGTGCT GTAGAAAAAAAACAAATGTGTCAAAAAAAGTTCCCACTTCTTCCTGTTTT TCCCACTTTTTTTTTCTGTTTTTCGTCATTTACTTTTTATTCATGTACAG TGTACACTTTATCACCTTTTCGGCAACCCTCCCCCCATCCCCCACCCCTC GGCCTCACCCTCATCTCTAGAACGCCAACCGAGTCTTCTACTGCTCGAAG TCGTGTCAAGCAGCGCACTGGAGATACCACAAGGGCTATTGCGGACGAAG GGACTCCGAGGAGGCGTTAACGTTCGCCAAAAGGTGCGCGATGGGTGGCG TAGGGGACATGGGTGGCATGCACTACAGGACGAGTGCAGGGGCAGTTCTA GAGCTCCACTCGAGAGATCTGTTGATGAAAGTCCCTCGCAACTCACCTAT CACCACCGACATTGTTTTTTAGCAAGGGTTCAGAATCTGTCCGCCTCTTG GTGGAGGGTGGCCCGGGCGTCAATTGTTGGTCTCGCAGGAGCAGTGTGCT TTATGATGAAAGATGAGCAGGGGTTTTGTCGAGGGTGATACATATGATAC TAAACGTGGGGGTGAAAGTTATACGTGGTAATATTATAATAACATTATTA CTTAAGTATTAATATTTCGTCGCCCGAGTGGTCTAGTAGGTAACCTGCAT ACCTGCTAGTGCGGAAGTTGTGAGTTCGATTCTTAGCTTCATCATAATTT ATGTTCTTTCTTTCGTAACGGAAAGCGTGGGAACGTGAGTAAGTAAAATT CAACCATTGGTTGACGAGTTGTAAGAGTCCTGAACTTGCATCGCGATAAA AATTGTAAGGCGTGAACCGGGGAGAGATGAAAATATCCTTTGTGACCACA GGCAGGATGGTAATTAGAGGTCCATCGGCTATAAGTGGGATTAAAAATAA ATAAAAATAATACAGAGTGATTAAAAAAATAATAAAATAAAAACTACGGT TTACACTCTATACCTAATTAATAGTATATTTTGTTAAAAATATGTGTGAG TAGATGATGTGGTGACATTTAGCGTACAATCGAATCGATCCAATCGATCG AGTGGGAGATGGTGGGGAAATGTCACTCGAAAATGGACCCCAGCATTTCG AGCACAGGTGTGTGTATGCTGCTCTGCCCCTGTTGGTAAAGGTGGCGAGG TGCATGATTCTGCGTCCGTTCCATTGTCCCGTGTTTTGTGCAGAGGCAAG GCAGGACTGAACAACCTTGGCAACACTTGCTTCCTGAACTCGGCGGTGCA GTGCCTGAGCCACGTGCAGCCCCTTACACGACATTTCCTCACCGACGCCT TCCTCGTCGATGTCAACACGACTAATCCCTTGGGTGAGTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig891:219085..223775-

>mRNA_F-serratus_M_contig891.20283.1 ID=mRNA_F-serratus_M_contig891.20283.1|Name=mRNA_F-serratus_M_contig891.20283.1|organism=Fucus serratus male|type=CDS|length=2184bp|location=Sequence derived from alignment at F-serratus_M_contig891:219085..223775- (Fucus serratus male)
ACAGCCGACAACGCGGAGGCTATCGAAGGAGGGGCTACAGGAGCTGGAGG
GGAGGGAAGCGGGGAAGATGACGGGGACCCAGCCGTCACAGCCCCTGCTG
CCGCCCGCGAGAACGGGGATAGCGCGACACAGGGCGTTAGGTGCGGGGAT
GTGCTCGCAGCTGGGAACTGCTCGAAGGCCGGCGAGAGCGACGAGGACAG
CCGACAACGCGGAGGCTATCGAAGGAGGGGCTACAGGAGCTGGAGGGGAG
GGAAGCGGGGAAGATGACGGGGACCCAGCCGTCACAGCCCCTGCTGCCGC
CCGCGAGAACGGGGATAGCGCGACACAGGGCGTTAGGTGCGGGGATGTGC
TCGCAGCTGGGAACTGCTCGAAGGCCGGCGAGAGCGACGAGGCGCCCGCG
CCGCCGTACCCCGGTCCGATCGACAATTCTGGTCTCGTGATGGACGCGGA
TACCGGCGGGAAGATCCCCGGGACGGGGCGCCGGCTTCGGGTGCGGCTCG
TGCGGGGGTATCACTTCGTCGTGGTACCTCAGGAGGCTTGGAAAGCGCTG
CACGCCTGCGCCCGCGCCGCCGTACCCCGGTCCGATCGACAATTCTGGTC
TCGTGATGGACGCGGATACCGGCGGGAAGATCCCCGGGACGGGGCGCCGG
CTTCGGGTGCGGCTCGTGCGGGGGTATCACTTCGTCGTGGTACCTCAGGA
GGCTTGGAAAGCGCTGCACGCCTGGTACGGAGGTGGACCAGCACTCCCAC
GCCTACTTGTTCCCGTGCAGGACGGGGCTTCCGGCATCATCGTGCACGAG
CCCCAGCTGTACCCGGTACGGAGGTGGACCAGCACTCCCACGCCTACTTG
TTCCCGTGCAGGACGGGGCTTCCGGCATCATCGTGCACGAGCCCCAGCTG
TACCCGGAGTTCTCCCGGCTGGACCCCGTCCTGCGACCAACCGTGAAAGC
ATCGCGCTCCGCTCACACGCTGGATGCGAACCTGCTGCCTGAGGCCCGGT
CTGCCGCGGCAACAATAGCGGTCAAAAACGACGGTTCTTATCGCGGTCTC
CTCGCCAACGGCAATCCCACCAATCCTGCCAATCCGTCGACCGATCCTGC
TTATCCGTCGGACGACCCCGCCATTCCGTCGAACGGCCCTGCCATTCCGT
CGAACGATCCGGCCGTTTTGACCAATGGGATGAAAGGAGGGGCGGAGAGC
GGGAAGGCGAAGGCAAAGGTCGAGATGCACCCGTGCTCGTCCTGCGGACG
CCCGACCAAGTACAAATGCAACAGCTGTATGAAGGAGTTCTCCCGGCTGG
ACCCCGTCCTGCGACCAACCGTGAAAGCATCGCGCTCCGCTCACACGCTG
GATGCGAACCTGCTGCCTGAGGCCCGGTCTGCCGCGGCAACAATAGCGGT
CAAAAACGACGGTTCTTATCGCGGTCTCCTCGCCAACGGCAATCCCACCA
ATCCTGCCAATCCGTCGACCGATCCTGCTTATCCGTCGGACGACCCCGCC
ATTCCGTCGAACGGCCCTGCCATTCCGTCGAACGATCCGGCCGTTTTGAC
CAATGGGATGAAAGGAGGGGCGGAGAGCGGGAAGGCGAAGGCAAAGGTCG
AGATGCACCCGTGCTCGTCCTGCGGACGCCCGACCAAGTACAAATGCAAC
AGCTGTATGAAGAACGCCAACCGAGTCTTCTACTGCTCGAAGTCGTGTCA
AGCAGCGCACTGGAGATACCACAAGGGCTATTGCGGACGAAGGGACTCCG
AGGAGGCGTTAACGTTCGCCAAAAGGTAACGCCAACCGAGTCTTCTACTG
CTCGAAGTCGTGTCAAGCAGCGCACTGGAGATACCACAAGGGCTATTGCG
GACGAAGGGACTCCGAGGAGGCGTTAACGTTCGCCAAAAGGTGCAAGGCA
GGACTGAACAACCTTGGCAACACTTGCTTCCTGAACTCGGCGGTGCAGTG
CCTGAGCCACGTGCAGCCCCTTACACGACATTTCCTCACCGACGCCTTCC
TCGTCGATGTCAACACGACTAATCCCTTGGGTGAGTAGGCAAGGCAGGAC
TGAACAACCTTGGCAACACTTGCTTCCTGAACTCGGCGGTGCAGTGCCTG
AGCCACGTGCAGCCCCTTACACGACATTTCCTCACCGACGCCTTCCTCGT
CGATGTCAACACGACTAATCCCTTGGGTGAGTAG
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