prot_F-serratus_M_contig891.20277.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig891.20277.1
Unique Nameprot_F-serratus_M_contig891.20277.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length67
Homology
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BLAST of mRNA_F-serratus_M_contig891.20277.1 vs. uniprot
Match: A0A7S4EKF1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKF1_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.190e-11
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 0 
Query:    1 MRETLLVGGIGAIACSLFGSPFGTM-FVEYPVHKMSGGETGYSVINGIAYVLLSSCFGLMAPIRSV 65
            +RE+++V GIG    S FGSPFGT+ ++ +P +K SG + GYS+ NG+ Y LL S FG++A I+S+
Sbjct:  333 VRESMIVDGIGTCIASFFGSPFGTVIYIGHPAYKRSGAKVGYSLANGVTY-LLFSWFGILALIQSI 397
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BLAST of mRNA_F-serratus_M_contig891.20277.1 vs. uniprot
Match: A0A448ZC90_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC90_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.220e-11
Identity = 30/66 (45.45%), Postives = 48/66 (72.73%), Query Frame = 0 
Query:    1 MRETLLVGGIGAIACSLFGSPFGTM-FVEYPVHKMSGGETGYSVINGIAYVLLSSCFGLMAPIRSV 65
            +RET++  G+G    S FGSPFGT+ ++ +P +K SG + GYS++NG+ Y L+ S FG++A I+S+
Sbjct:  330 VRETMISDGVGTCISSFFGSPFGTVIYIGHPAYKRSGAKAGYSLVNGVTY-LIFSWFGILALIQSI 394
[Close]
BLAST of mRNA_F-serratus_M_contig891.20277.1 vs. uniprot
Match: A0A265N8L9_9BACI (Uracil permease n=2 Tax=Virgibacillus TaxID=84406 RepID=A0A265N8L9_9BACI)

HSP 1 Score: 49.7 bits (117), Expect = 2.860e-5
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0 
Query:    1 MRETLLVGGIGAIACSLFGSPFGT-MFVEYPVHKMSGGETGYSVINGIAYVLLSSCFGLMAPIRSV 65
            ++E+++V GIG +   +FG  F T +++     K  G   GYS++NGI YVL ++ FGL+A I S+
Sbjct:  285 IKESMIVDGIGTMVGPIFGGAFPTTVYMASTGSKWMGAGRGYSILNGIVYVL-AAMFGLVAVISSI 349
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig891.20277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S4EKF1_9STRA1.190e-1148.48Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZC90_9STRA2.220e-1145.45Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A265N8L9_9BACI2.860e-539.39Uracil permease n=2 Tax=Virgibacillus TaxID=84406 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..62
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..15
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig891contigF-serratus_M_contig891:63155..64035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig891.20277.1mRNA_F-serratus_M_contig891.20277.1Fucus serratus malemRNAF-serratus_M_contig891 62512..64566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig891.20277.1 ID=prot_F-serratus_M_contig891.20277.1|Name=mRNA_F-serratus_M_contig891.20277.1|organism=Fucus serratus male|type=polypeptide|length=67bp
MRETLLVGGIGAIACSLFGSPFGTMFVEYPVHKMSGGETGYSVINGIAYV
LLSSCFGLMAPIRSVD*
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