prot_F-serratus_M_contig891.20275.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig891.20275.1
Unique Nameprot_F-serratus_M_contig891.20275.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length83
Homology
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BLAST of mRNA_F-serratus_M_contig891.20275.1 vs. uniprot
Match: D8LHI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI4_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.650e-11
Identity = 35/76 (46.05%), Postives = 44/76 (57.89%), Query Frame = 0 
Query:    3 DGGIVATTTCWEHGNWLQYFIAYLMMGVVFIGIEALRRAAIGDLDASIECSEADADFKGWLSKEEYMAEKIIEEKK 78
            D  +V T +CW+H +   Y  AYLMM VVF+ IE +RRA +G+LD  I   EADA FK W   E       +EE K
Sbjct:  506 DLEVVTTASCWDHADQWHYMTAYLMMAVVFVAIEGVRRAGVGNLDEPILTEEADA-FKDWYGDEPPTTGPKVEEDK 580
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig891.20275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHI4_ECTSI1.650e-1146.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 18..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..82
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..17
NoneNo IPR availableTMHMMTMhelixcoord: 18..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig891contigF-serratus_M_contig891:36271..37234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig891.20275.1mRNA_F-serratus_M_contig891.20275.1Fucus serratus malemRNAF-serratus_M_contig891 35715..37494 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig891.20275.1 ID=prot_F-serratus_M_contig891.20275.1|Name=mRNA_F-serratus_M_contig891.20275.1|organism=Fucus serratus male|type=polypeptide|length=83bp
MGDGGIVATTTCWEHGNWLQYFIAYLMMGVVFIGIEALRRAAIGDLDASI
ECSEADADFKGWLSKEEYMAEKIIEEKKPKHE*
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