prot_F-serratus_M_contig890.20273.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig890.20273.1
Unique Nameprot_F-serratus_M_contig890.20273.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length449
Homology
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BLAST of mRNA_F-serratus_M_contig890.20273.1 vs. uniprot
Match: D8LHX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHX3_ECTSI)

HSP 1 Score: 595 bits (1534), Expect = 2.090e-209
Identity = 329/486 (67.70%), Postives = 369/486 (75.93%), Query Frame = 0 
Query:    1 MGGA-NAAVLAVGRTFFRITMLGYTLSGLAMFPSVILGIQKDYFTWEMDRCSCLISD--------PITSEFDTLET---------CVPGEDMGRVNIGWKKYSMDKLVHTNGCPEATNSYETDP--DTLEERLDDPQSFGRFDKVYPLNGVFQKTDNPTQADEDNGAVKAGGGVIAMQVIISFFSIITYKMLKASYTSNGSHCSVGLSLMTRLNFLFGLGAAVAVVCFWWLIEGRFGDSDKALTQALADTLFNECWVETAN------QEYCPVRPWDFTGPGLALWLAIFQVGLFLIMTLYMFWKAPTVEGVLDGSMDTKGVQLAPRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKAXXXXXXXXXXXAAAGP--------ASSTASSDFEAKDDPEMQEDTLSALHSEYAGPADLEMIVEESEEDRASSRY-SETRYSEPTRYSDTYSDYDDRPARQ---SRTQYNAPSR 448
            MGGA NAAV+AVGRTFFR+ ++GYTLSGLAMFPSVILG+ K YF WEMDRC+C++          PI S      T         CV G+D  +V+IGWK+++ DKLVHT GCP AT  YE +P  D  +  LD+ +S   FD+VYPL+G FQKTDNPTQADE NG  +AGGGV+AMQV+++FFSI+TYKMLKASY SNGSHCS+GL+LMTRLN L G+G A A+V FWWLIEGRFGD  KALT AL + LF+ECW ETA+      Q +CPVRPW FTGPGL + L IFQVGLFL+MTLYM WKAPTVEGVLDGSMD  GV L PRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKA   XXXXXXXX              S TASSD+EAKDDPEMQ+D LS + SEYAGPADLEMIVEESEEDR SSRY SETRYS    YSDTYSDY DRPARQ   SR  + AP R
Sbjct:    1 MGGAGNAAVVAVGRTFFRVAIVGYTLSGLAMFPSVILGVSKGYFEWEMDRCTCVVEQEAAATTGQPIVSSSSLSGTGTTAGASSSCVFGQDFAKVSIGWKEFTYDKLVHTVGCPIATAFYEANPALDDDDLNLDNERSLYFFDEVYPLDGEFQKTDNPTQADESNGGSEAGGGVVAMQVVLTFFSILTYKMLKASYLSNGSHCSIGLALMTRLNLLVGVGTAAAIVSFWWLIEGRFGDEQKALTTALENILFDECWGETADDDAAGLQTFCPVRPWTFTGPGLPMMLGIFQVGLFLLMTLYMVWKAPTVEGVLDGSMDPTGVVLKPRVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKAAKAXXXXXXXXXXXXXXXXXXXXXGSDTASSDYEAKDDPEMQDD-LSVMQSEYAGPADLEMIVEESEEDRTSSRYESETRYSHAPSYSDTYSDYGDRPARQQHASRGSHAAPIR 485
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig890.20273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHX3_ECTSI2.090e-20967.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..278
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..212
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..256
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 279..448
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 173..192
NoneNo IPR availableTMHMMTMhelixcoord: 147..169
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 189..211
NoneNo IPR availableTMHMMTMhelixcoord: 256..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig890contigF-serratus_M_contig890:295662..313717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig890.20273.1mRNA_F-serratus_M_contig890.20273.1Fucus serratus malemRNAF-serratus_M_contig890 294198..314099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig890.20273.1 ID=prot_F-serratus_M_contig890.20273.1|Name=mRNA_F-serratus_M_contig890.20273.1|organism=Fucus serratus male|type=polypeptide|length=449bp
MGGANAAVLAVGRTFFRITMLGYTLSGLAMFPSVILGIQKDYFTWEMDRC
SCLISDPITSEFDTLETCVPGEDMGRVNIGWKKYSMDKLVHTNGCPEATN
SYETDPDTLEERLDDPQSFGRFDKVYPLNGVFQKTDNPTQADEDNGAVKA
GGGVIAMQVIISFFSIITYKMLKASYTSNGSHCSVGLSLMTRLNFLFGLG
AAVAVVCFWWLIEGRFGDSDKALTQALADTLFNECWVETANQEYCPVRPW
DFTGPGLALWLAIFQVGLFLIMTLYMFWKAPTVEGVLDGSMDTKGVQLAP
RVVEVEMVVGKALATDGDPDYDSENPLYNGAATMIRPYPLPKSAKAAKAA
EAVEVEEAAAGPASSTASSDFEAKDDPEMQEDTLSALHSEYAGPADLEMI
VEESEEDRASSRYSETRYSEPTRYSDTYSDYDDRPARQSRTQYNAPSR*
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