mRNA_F-serratus_M_contig890.20271.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: D8LHX2_ECTSI (Serine/threonine protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX2_ECTSI) HSP 1 Score: 556 bits (1432), Expect = 5.940e-184 Identity = 305/520 (58.65%), Postives = 353/520 (67.88%), Query Frame = 1
Query: 85 SMEDRVCARMDIEGLPLGVRHIFGIFDGHGGDSVAEFCRSHLIDGIVERLR-----ARHSTLSFPSGKITRPS---VGVEDAGEEG-----------------------------PLDVANCVREMCREVDAQVKGEFFTPTGRYVAPRVYDPLDVTP---PPQAQLKGGENGPGI-----MTSEVRR-------------------------KSNSLEDS------------EASIDADG--LAFSTCGTT-SLIIVITDAWIVCCNTGDSRAVLASEGVSKPLSRDHTPENPHERERIEAAGGTVKHKRVDGRLAVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSDEDEFVVMACDGVWDVVGNDEACNFLRKRIQDGCRDLGEMLERLQDACLAKSSMDNMSILMISFRAAWVDVDGPHVHKSARFILQWGCKQVLEWLSDNNFGQYQDDFKNHAIDGAALLSLTEEDLHHKLRLKKVGLRKKLWQKLSPLRQGYLAWSKRELAEWLGYVGL 1389
SMEDR+CARMD+EG PLGVRHIF +FDGHGGDSVAE+CR++L D IV+R+R A S + + I + + V AG+EG P A CVR+ CREVDA+VKG FFTP GRYVAPRV DPLD +P P + G G G M+ E RR K N E + A+ DADG FSTCGTT SLI+V++DA+I+CCNTGDSRAVLASEG S+ LS DH P+N ER+RIEAAGG V+H RV+G+LAVSRCIGDHPFKSDPNLP ERQMVVCDPEVT+ RSDEDEFVVMACDGVWDV+GNDEAC FLRK IQ+G RDLG +LE ++D CLAK SMDNMS+L+I+F+AAW + G H+HKSAR+ILQWGC++V WL+ NNFGQYQDDF H IDG LLSLTE DLHHKLRLKKVGLRKKLWQKLSPLR GYLAWSK ELA WL +VGL
Sbjct: 64 SMEDRLCARMDLEGCPLGVRHIFCLFDGHGGDSVAEYCRTYLADRIVQRIREAQALATTSATTTEAATIAQSAQARVPANGAGKEGINEHPGGGGGGRTFGDGERGSDGGTATAAPYMAAGCVRDACREVDAEVKGTFFTPAGRYVAPRVDDPLDPSPKQQPTRTSSSSGGFGEGADQARPMSMEERRLEKAKRKPSTQANKSPARDGDAGARKENGGETNAGFAGGWGDGSGNATDDADGGPTRFSTCGTTTSLIVVVSDAFIICCNTGDSRAVLASEGASRQLSVDHKPDNRAERQRIEAAGGKVEHNRVEGKLAVSRCIGDHPFKSDPNLPLERQMVVCDPEVTVIKRSDEDEFVVMACDGVWDVMGNDEACFFLRKSIQEGNRDLGRILEDMEDVCLAKQSMDNMSVLVIAFKAAWEE--GLHLHKSARYILQWGCEEVSRWLATNNFGQYQDDFDKHYIDGVQLLSLTEADLHHKLRLKKVGLRKKLWQKLSPLRSGYLAWSKVELAAWLEHVGL 581
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: A0A7S4AQP9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQP9_9STRA) HSP 1 Score: 171 bits (434), Expect = 4.970e-43 Identity = 128/404 (31.68%), Postives = 186/404 (46.04%), Query Frame = 1
Query: 85 SMEDR--VCARMDIEGL--PLGVRH-IFGIFDGHGGDSVAEFCRSHLIDGIVERLRARHSTLSFPSGKITRPSVGVEDAGEEGPLDVANCVREMCREVDAQVKGEFFTPTGRYVAPRVYDPLDVTPPPQAQLKGGENGPGIMTSEVRRKSNSLEDSEASIDADGLAFSTCGTTSLIIVITDAWIVCCNTGDSRAVLASEGVSKPLSRDHTPENPHERERIEAAGGTVKHKRVDGRLAVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSDEDEFVVMACDGVWDVVGNDEACNFLRKRIQDGCRDLGEMLERLQDACLAKSSMDNMSILMISFRAAWVDVDGPHVHKSARFILQWGCKQVL-EWLSDNNFGQYQDDFKNHAIDGAALLSLTEEDLHHKLRL 1278
+MED V + +EG PL H IFG+ DGHGGD +EF + + R + S+ VED ++ C+R + E ++ E Q L+ + + + R ++ + E S G+T ++++T + I+C N GDSRA+L G PLS DH P N E ERI A G VK KRVDG LAVSR +GD +KS+ LP E Q V+ +PE RS +DEF+++ACDG+WDV N++ +F++ + +G DLG + E D CL K+S DNM+I M+SF+ + G G K V+ + + Q Q K A A+ + L ED RL
Sbjct: 55 TMEDAHMVWTDIPVEGRQEPLRKGHVIFGVMDGHGGDFTSEFAALNFMKIFSANNRLKKYA-----------SMSVEDQSNVPGIE---CLRPLLTETFGRLDAEIRK--------------------QQNLRNEKRFQAVSKQQARSETPTRVKYERS-----------GSTCCVVLVTPSHIICANAGDSRAILRRAGKVLPLSFDHKPNNAPELERINQASGFVKCKRVDGDLAVSRGLGDFTYKSNELLPVEHQKVIPNPEFVTYPRSKDDEFMILACDGIWDVASNEQCGSFIQSLLDEGEPDLGLICEEAIDTCLDKNSRDNMTIGMVSFQGCKIPTGG------------LGIKNVIWQRRAARQARQLQQSAKKVAARAASNVGLISEDTSSSKRL 401
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: A0A7S2V4V3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V3_9STRA) HSP 1 Score: 169 bits (428), Expect = 4.990e-43 Identity = 85/184 (46.20%), Postives = 117/184 (63.59%), Query Frame = 1
Query: 532 DSEASIDADGLAFSTCGTTSLIIVITDAWIVCCNTGDSRAVLASEGVSKPLSRDHTPENPHERERIEAAGGTVKHKRVDGRLAVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSDEDEFVVMACDGVWDVVGNDEACNFLRKRIQDGCRDLGEMLERLQDACLAKSSMDNMSILMISFRA 1083
D + +AD G T++ VIT + IVC + GDSR ++ + G + LS DH P+ ERERIE+AGG V +RVDG LAV+R +GD +K P+LP +RQ V C P+V T RS DE +V+ACDG+WDV+ N + C+ +R+ Q+G D G + E L D CL K S DNMS++M+ F A
Sbjct: 110 DEKLKTEADVQCGDCSGCTAICAVITPSHIVCASAGDSRGIMVTSGQVRALSEDHKPDGAIERERIESAGGCVSMRRVDGDLAVARALGDFQYKDRPDLPVDRQKVTCVPDVRTTPRSSGDEVLVLACDGIWDVMSNQDCCDCVRQIYQEGETDSGLVCEELLDTCLTKGSRDNMSVVMVQFPA 293
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: A0A6G0WXM2_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXM2_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.630e-41 Identity = 93/239 (38.91%), Postives = 142/239 (59.41%), Query Frame = 1
Query: 466 KGGENGPGIMTSEVRRKSNSLEDSEASIDADGLAFSTCGTTSLIIVITDAWIVCCNTGDSRAVLASEGVSKPLSRDHTPENPHERERIEAAGGTVKHKRVDGRLAVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSDEDEFVVMACDGVWDVVGNDEACNFLRKRIQDGCRDLGEMLERLQDACLAKSSMDNMSILMISFRAAWVDV-DGPHVHKSARFILQWGCKQVLEWLSDN 1179
+GG P + + R +L++ ++ + G T++ VITD I+ N+GDSR+VLAS+G P+S DH P N ER+RIE AGG+V++ RV+G LAVSR +GD +K +L E Q V +PE+ + R+ +DEF+++ACDG+WDV+ N+EAC+++R G +LG + E + D CL+ S DNMSI+++ F A + DG + AR + KQ E +N
Sbjct: 82 QGGGKDPKQIGETLSRSFLALDEKHRNLQSIVNGEDHSGCTAIAAVITDTHIIVSNSGDSRSVLASDGGVVPMSFDHKPNNLPERKRIENAGGSVRNNRVNGDLAVSRALGDFVYKQRGDLKAEEQQVSAEPEIVVHSRTKDDEFLILACDGIWDVMTNEEACDYVRSLFDKGETNLGLVCEEVLDHCLSLGSRDNMSIIVVKFAGAKIGRGDGVMGIRKAREAAEKEAKQREEAEHNN 320
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: A0A7S4DC67_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC67_HETAK) HSP 1 Score: 168 bits (425), Expect = 2.470e-41 Identity = 90/209 (43.06%), Postives = 129/209 (61.72%), Query Frame = 1
Query: 778 AVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSD-EDEFVVMACDGVWDVVGNDEACNFLRKRIQ----DGCRDLGEMLERLQDACLAKSSMDNMSILMISFRAAWVDVDGP--HVHKSARFILQWGCKQVLEWLSDNNFGQYQDDFKNHAIDGAALLSLTEEDLHHKLRLKKVGLRKKLWQKLSPLRQGYLAWSKRELAEWLGYV 1383
A +R G P + LP E Q+V +P + + R+ D F+++ACDGVWD ++EA +R R+ G RDLG++L L D CL ++S DNMS ++++F AW G VH SAR++ +W VL WL+ +FG+YQD F+N+ IDG L LT+EDL KLRLKK GLR +LW+++S LR+GYLAW+ + WL +
Sbjct: 4 AATRLPG--PGEDGDLLPPEEQIVTAEPGLRVYERAPGRDLFLILACDGVWDAQTDEEAAFLVRARLDAQLAGGDRDLGKVLAALLDDCLRRASRDNMSAVLLAFPGAWEQPGGASGRVHPSARYLEKWTVNDVLRWLAARSFGEYQDAFENNEIDGINFLQLTQEDLSTKLRLKKAGLRTRLWEEMSALRRGYLAWNVEQTVMWLKQI 210
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: A0A448YW42_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW42_9STRA) HSP 1 Score: 163 bits (413), Expect = 3.680e-40 Identity = 108/338 (31.95%), Postives = 169/338 (50.00%), Query Frame = 1
Query: 85 SMEDR--VCARMDIEGL--PLGVRH-IFGIFDGHGGDSVAEFCRSHLID--GIVERLRARHSTLSFPSGKITRPSVGVEDAGEEGPLDVANCVREMCREVDAQVKGEFFTPTGRYVAPRVYDPLDVTPPPQAQLKGGENGPGIMTSEVRRKSNSLEDSEASIDADGLAFSTCGTTSLIIVITDAWIVCCNTGDSRAVLASEGVSKPLSRDHTPENPHERERIEAAGGTVKHKRVDGRLAVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSDEDEFVVMACDGVWDVVGNDEACNFLRKRIQDGCRDLGEMLERLQDACLAKSSMDNMSILMISF 1077
+MED V + ++G PLG H +FG+ DGHGGD +++ + + + RLR +++ +S A ++ + C+R E ++ E Q L+ + G +++ L + + + G+T ++++T + I+C N GDSRA+L G PLS DH P N E ERI AGG V+ KRVDG LAVSR +GD +K + LP ++Q V+ +PE RS DEF+V+ACDG+WDV N++ +F++ + +G DLG + E D CL K+S DNM+I ++SF
Sbjct: 55 TMEDAHMVHTSIPVQGRSEPLGSGHALFGVMDGHGGDFTSDYAAKNFLRLFSVSPRLR-KYADMS---------------ASDQSSVPGIECLRPALTETFGRLDAEIRK--------------------QQNLRNEQRFLGQQXXXXXKEAAPLSSGHSRV-----RYERSGSTCCVVLVTPSHILCANAGDSRAILRRAGRVLPLSFDHKPNNAPELERIHNAGGFVRCKRVDGDLAVSRGLGDFTYKGNEMLPVDQQKVIPNPEFVCYPRSKNDEFMVLACDGIWDVANNEQCGSFVQSLLDEGEPDLGLICEEAIDTCLDKNSRDNMTIGLVSF 351
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: A0A024UAN9_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAN9_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.010e-39 Identity = 80/170 (47.06%), Postives = 120/170 (70.59%), Query Frame = 1
Query: 580 GTTSLIIVITDAWIVCCNTGDSRAVLASEGVS-KPLSRDHTPENPHERERIEAAGGTVKHKRVDGRLAVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSDEDEFVVMACDGVWDVVGNDEACNFLRKRIQDGCRDLGEMLERLQDACLAKSSMDNMSILMISFRAA 1086
G T++ ++TD I+ N+GDSR+VLA+ G + +P+S DH P NP E+ RIE AGG V++ RV+G LAVSR +GD+ FK +L E Q V +P++ + RS +EF+++ACDGVWDV+ N+EAC+F+R ++ G RD+G + E L D CL+ S DNMS+++++F A
Sbjct: 123 GCTAIAAIVTDTHIIVANSGDSRSVLATCGDAVEPMSFDHKPNNPREKLRIENAGGMVRNNRVNGDLAVSRALGDYYFKERHDLAPEEQQVSPEPDIKIEARSAANEFLLLACDGVWDVLSNEEACDFVRSVMKLGERDMGLICEELLDHCLSLDSRDNMSVVLVAFDGA 292
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: W4H0A2_9STRA (PPM-type phosphatase domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0A2_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.520e-39 Identity = 79/169 (46.75%), Postives = 114/169 (67.46%), Query Frame = 1
Query: 580 GTTSLIIVITDAWIVCCNTGDSRAVLASEGVSKPLSRDHTPENPHERERIEAAGGTVKHKRVDGRLAVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSDEDEFVVMACDGVWDVVGNDEACNFLRKRIQDGCRDLGEMLERLQDACLAKSSMDNMSILMISFRAA 1086
G T++ I D IV N+GDSR+VLA++G P+S DH P NP ER+RIE AGG+V++ RV+G LAVSR +GD +K P+L E Q V +P+V R+ + EF+++ACDGVWDV+ N++AC F+R + G ++G + E + D CL+ S DNMSI+++ F A
Sbjct: 120 GCTAIAAFINDTHIVVANSGDSRSVLATDGGVVPMSYDHKPNNPGERQRIENAGGSVRNNRVNGDLAVSRALGDFVYKQRPDLRAEDQQVSAEPDVKAVERTKDFEFLLLACDGVWDVMSNEDACAFVRSLLAHGESNMGLICEEVLDHCLSLGSRDNMSIVVVKFPGA 288
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: A0A067CWE3_SAPPC (PPM-type phosphatase domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CWE3_SAPPC) HSP 1 Score: 158 bits (400), Expect = 2.800e-39 Identity = 75/169 (44.38%), Postives = 114/169 (67.46%), Query Frame = 1
Query: 580 GTTSLIIVITDAWIVCCNTGDSRAVLASEGVSKPLSRDHTPENPHERERIEAAGGTVKHKRVDGRLAVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSDEDEFVVMACDGVWDVVGNDEACNFLRKRIQDGCRDLGEMLERLQDACLAKSSMDNMSILMISFRAA 1086
G T++ +T I+ N+GDSR+VLA++G P+S DH P N ER RIE AGG+V++ RV+G LAVSR +GD +K +L E Q V +P++ + VR+ E+EF+++ACDG+WDV+ N+EAC+F+R + G ++G + E + D CL S DNMS++++ F A
Sbjct: 122 GCTAIAAFVTHTHIIVANSGDSRSVLATDGSVVPMSYDHKPNNETERRRIENAGGSVRNNRVNGDLAVSRALGDFVYKQRSDLKAEEQQVSAEPDIKIEVRNKENEFLILACDGIWDVMTNEEACDFVRSLMLKGENNMGLICEEMLDHCLQLGSRDNMSVIVVKFSGA 290
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Match: A0A1E7FMQ6_9STRA (Protein serine/threonine phosphatase 2C (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMQ6_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.850e-39 Identity = 82/183 (44.81%), Postives = 116/183 (63.39%), Query Frame = 1
Query: 523 SLEDSEASIDADGLAFSTCGTTSLIIVITDAWIVCCNTGDSRAVLASEGVSKPLSRDHTPENPHERERIEAAGGTVKHKRVDGRLAVSRCIGDHPFKSDPNLPRERQMVVCDPEVTMTVRSDEDEFVVMACDGVWDVVGNDEACNFLRKRIQDGCRDLGEMLERLQDACLAKSSMDNMSILMI 1071
S+ED A + + G+T +++++T + I+ N GDSRA+L G PLS DH P N E ERI A G VK KRVDG LAVSR +GD +KS+ LP E+Q V+ +PE + RS +DEF+V+ACDG+WDV N++ +F++ + +G DLG + E D CL K+S DNM+I M+
Sbjct: 75 SIEDQSNGSPAPRVKYERSGSTCIVVLVTPSHIISANAGDSRAILRRNGNILPLSFDHKPNNIPELERINLASGFVKCKRVDGDLAVSRGLGDFSYKSNGLLPVEQQKVIPNPEFVIYPRSKDDEFMVLACDGIWDVASNEQCGSFVQSLLDEGESDLGLICEESIDTCLDKNSRDNMTIAMV 257 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig890.20271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig890.20271.1 >prot_F-serratus_M_contig890.20271.1 ID=prot_F-serratus_M_contig890.20271.1|Name=mRNA_F-serratus_M_contig890.20271.1|organism=Fucus serratus male|type=polypeptide|length=455bp MGPRSAGRKTPQEPERSMEDRVCARMDIEGLPLGVRHIFGIFDGHGGDSVback to top mRNA from alignment at F-serratus_M_contig890:238920..257798+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig890.20271.1 ID=mRNA_F-serratus_M_contig890.20271.1|Name=mRNA_F-serratus_M_contig890.20271.1|organism=Fucus serratus male|type=mRNA|length=18879bp|location=Sequence derived from alignment at F-serratus_M_contig890:238920..257798+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig890:238920..257798+ >mRNA_F-serratus_M_contig890.20271.1 ID=mRNA_F-serratus_M_contig890.20271.1|Name=mRNA_F-serratus_M_contig890.20271.1|organism=Fucus serratus male|type=CDS|length=2730bp|location=Sequence derived from alignment at F-serratus_M_contig890:238920..257798+ (Fucus serratus male)back to top |